Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p28410 Brassica napus HOM05D003933 ORTHO05D004746 9.6e-189 663.3 328 100.0
BraA10t44888Z Brassica rapa HOM05D003933 ORTHO05D004746 1.1e-187 659.8 327 99.4
C09p68670 Brassica napus HOM05D003933 ORTHO05D004746 4.6e-175 617.8 327 92.7
BolC9t59613H Brassica oleracea HOM05D003933 ORTHO05D004746 4.6e-175 617.8 327 93.3
BcaB08g37269 Brassica carinata HOM05D003933 ORTHO05D004746 1.1e-165 586.6 374 81.0
AL6G18670 Arabidopsis lyrata HOM05D003933 ORTHO05D004746 1.5e-144 516.5 388 69.8
AT5G08270 Arabidopsis thaliana HOM05D003933 ORTHO05D004746 1.5e-144 516.5 386 70.5
Thhalv10013838m.g Eutrema salsugineum HOM05D003933 ORTHO05D004746 8.8e-142 507.3 379 70.7
Sp6g34690 Schrenkiella parvula HOM05D003933 ORTHO05D004746 1.3e-140 503.4 378 71.4
Aa31LG3G18300 Aethionema arabicum HOM05D003933 ORTHO05D004746 5.2e-134 481.5 394 65.0
THA.LOC104800863 Tarenaya hassleriana HOM05D003933 ORTHO05D004746 1.8e-126 456.4 395 61.0
Thhalv10004353m.g Eutrema salsugineum HOM05D003933 ORTHO05D004746 5.8e-125 451.4 392 62.0
Carub.0006s2098 Capsella rubella HOM05D003933 ORTHO05D004746 4.9e-124 448.4 392 62.0
CARHR190340 Cardamine hirsuta HOM05D003933 ORTHO05D004746 3.2e-123 445.7 397 61.0
AL6G34400 Arabidopsis lyrata HOM05D003933 ORTHO05D004746 4.1e-123 445.3 392 61.0
AT5G23200 Arabidopsis thaliana HOM05D003933 ORTHO05D004746 6.0e-122 441.4 392 60.5
BraA03t13757Z Brassica rapa HOM05D003933 ORTHO05D004746 2.5e-120 436.0 394 59.4
Sp2g23940 Schrenkiella parvula HOM05D003933 ORTHO05D004746 3.3e-120 435.6 392 59.7
Carub.0006s0715 Capsella rubella HOM05D003933 ORTHO05D004746 4.3e-120 435.3 343 66.8
BolC7t44956H Brassica oleracea HOM05D003933 ORTHO05D004746 1.6e-119 433.3 395 58.5
C07p44350 Brassica napus HOM05D003933 ORTHO05D004746 2.1e-119 433.0 394 58.6
A03p46330 Brassica napus HOM05D003933 ORTHO05D004746 2.3e-118 429.5 390 59.0
Nitab4.5_0003643g0030 Nicotiana tabacum HOM05D003933 ORTHO05D004746 6.0e-114 414.8 397 55.7
Duzib277G0001 Durio zibethinus HOM05D003933 ORTHO05D004746 1.3e-113 413.7 390 55.6
Duzib132G1110 Durio zibethinus HOM05D003933 ORTHO05D004746 6.6e-113 411.4 390 55.1
CAN.G107.7 Capsicum annuum HOM05D003933 ORTHO05D004746 1.9e-112 409.8 398 55.8
Thecc.02G159300 Theobroma cacao HOM05D003933 ORTHO05D004746 1.9e-112 409.8 392 55.4
Nitab4.5_0000569g0090 Nicotiana tabacum HOM05D003933 ORTHO05D004746 3.3e-112 409.1 398 55.3
Manes.08G053300 Manihot esculenta HOM05D003933 ORTHO05D004746 1.2e-111 407.1 395 55.9
PGR142G4240 Punica granatum HOM05D003933 ORTHO05D004746 1.2e-111 407.1 395 54.2
CSS0045284 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 4.7e-111 405.2 398 54.5
COL.COLO4_08591 Corchorus olitorius HOM05D003933 ORTHO05D004746 6.2e-111 404.8 392 54.6
Solyc12g088450.3 Solanum lycopersicum HOM05D003933 ORTHO05D004746 1.1e-110 404.1 397 55.4
QL05p009967 Quercus lobata HOM05D003933 ORTHO05D004746 3.1e-110 402.5 396 56.1
PGSC0003DMG402011550 Solanum tuberosum HOM05D003933 ORTHO05D004746 3.1e-110 402.5 397 55.4
FAN07G0849 Fragaria x ananassa HOM05D003933 ORTHO05D004746 6.8e-110 401.4 398 54.5
Manes.09G017800 Manihot esculenta HOM05D003933 ORTHO05D004746 8.9e-110 401.0 396 54.0
TWI77G0671 Tripterygium wilfordii HOM05D003933 ORTHO05D004746 8.9e-110 401.0 398 54.3
Potri.005G092000 Populus trichocarpa HOM05D003933 ORTHO05D004746 1.2e-109 400.6 398 53.5
FvH4_4g36990 Fragaria vesca HOM05D003933 ORTHO05D004746 2.0e-109 399.8 398 54.5
MD13G1004400 Malus domestica HOM05D003933 ORTHO05D004746 2.6e-109 399.4 396 53.3
Prupe.1G348200 Prunus persica HOM05D003933 ORTHO05D004746 5.8e-109 398.3 397 54.2
RcHm_v2.0_Chr4g0446781 Rosa chinensis HOM05D003933 ORTHO05D004746 9.9e-109 397.5 398 53.8
Cfa008748 Carpinus fangiana HOM05D003933 ORTHO05D004746 1.7e-108 396.7 398 54.3
Duzib248G0690 Durio zibethinus HOM05D003933 ORTHO05D004746 2.2e-108 396.4 390 53.1
Lj6A748G52 Lonicera japonica HOM05D003933 ORTHO05D004746 3.7e-108 395.6 391 55.2
Ciclev10031732m.g Citrus clementina HOM05D003933 ORTHO05D004746 2.4e-107 392.9 393 53.7
Atru.chr11.1157 Acer truncatum HOM05D003933 ORTHO05D004746 7.1e-107 391.3 394 54.3
CSS0043425 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 9.2e-107 391.0 398 53.3
Cc11_g08880 Coffea canephora HOM05D003933 ORTHO05D004746 1.2e-106 390.6 396 52.3
PGSC0003DMG400021516 Solanum tuberosum HOM05D003933 ORTHO05D004746 2.7e-106 389.4 387 54.3
PSO063G7666 Papaver somniferum HOM05D003933 ORTHO05D004746 7.8e-106 387.9 399 52.1
Aqoxy5G00269 Aquilegia oxysepala HOM05D003933 ORTHO05D004746 1.0e-105 387.5 398 52.3
ClCG10G012050 Citrullus lanatus HOM05D003933 ORTHO05D004746 1.0e-105 387.5 394 53.3
ECA234G4145 Erigeron canadensis HOM05D003933 ORTHO05D004746 2.3e-105 386.3 391 53.5
Solyc04g078160.4 Solanum lycopersicum HOM05D003933 ORTHO05D004746 5.1e-105 385.2 389 53.5
Gohir.A13G060600 Gossypium hirsutum HOM05D003933 ORTHO05D004746 1.1e-104 384.0 383 53.3
Rhsim09G0099700 Rhododendron simsii HOM05D003933 ORTHO05D004746 2.5e-104 382.9 391 53.2
PSO782G2797 Papaver somniferum HOM05D003933 ORTHO05D004746 4.3e-104 382.1 399 51.9
TAR629G2222 Trochodendron aralioides HOM05D003933 ORTHO05D004746 4.3e-104 382.1 398 52.0
Eucgr.J00872 Eucalyptus grandis HOM05D003933 ORTHO05D004746 7.3e-104 381.3 397 51.4
Gorai.013G069800 Gossypium raimondii HOM05D003933 ORTHO05D004746 7.3e-104 381.3 389 52.2
Sed0001276 Sechium edule HOM05D003933 ORTHO05D004746 7.3e-104 381.3 391 52.7
Actinidia14952 Actinidia chinensis HOM05D003933 ORTHO05D004746 2.8e-103 379.4 400 52.5
AUR62032977 Chenopodium quinoa HOM05D003933 ORTHO05D004746 2.8e-103 379.4 408 49.0
CsaV3_3G031790 Cucumis sativus L. HOM05D003933 ORTHO05D004746 4.7e-103 378.6 395 52.4
Lsat_1_v5_gn_4_15060 Lactuca sativa HOM05D003933 ORTHO05D004746 4.7e-103 378.6 406 51.0
Sopen04g031790 Solanum pennellii HOM05D003933 ORTHO05D004746 2.4e-102 376.3 397 52.4
DCAR_007284 Daucus carota HOM05D003933 ORTHO05D004746 3.1e-102 375.9 397 51.9
CANSAT11G2660 Cannabis sativa HOM05D003933 ORTHO05D004746 5.2e-102 375.2 370 53.2
vmacro10631 Vaccinium macrocarpon HOM05D003933 ORTHO05D004746 5.2e-102 375.2 406 50.5
Gohir.D13G061300 Gossypium hirsutum HOM05D003933 ORTHO05D004746 6.8e-102 374.8 389 51.4
Peaxi162Scf00081g01011 Petunia axillaris HOM05D003933 ORTHO05D004746 2.0e-101 373.2 396 52.0
CAN.G1054.19 Capsicum annuum HOM05D003933 ORTHO05D004746 2.6e-101 372.9 392 51.0
Hund08600 Selenicereus undatus HOM05D003933 ORTHO05D004746 4.4e-101 372.1 399 50.6
HanXRQChr12g0377651 Helianthus annuus HOM05D003933 ORTHO05D004746 9.9e-101 370.9 394 50.3
Migut.L00761 Erythranthe guttata HOM05D003933 ORTHO05D004746 2.9e-100 369.4 402 51.0
SGA_v2.0_scaffold38G15064 Striga asiatica HOM05D003933 ORTHO05D004746 3.8e-100 369.0 402 50.0
SalBow8G0218 Salvia bowleyana HOM05D003933 ORTHO05D004746 4.9e-100 368.6 397 51.9
arahy.Tifrunner.gnm1.ann1.2XRJ77 Arachis hypogaea HOM05D003933 ORTHO05D004746 8.4e-100 367.9 396 49.7
EL10Ac9g22955 Beta vulgaris HOM05D003933 ORTHO05D004746 1.1e-99 367.5 402 49.8
Lalb_Chr10g0094951 Lupinus albus HOM05D003933 ORTHO05D004746 5.4e-99 365.2 395 49.9
MSTRG.890 Avicennia marina HOM05D003933 ORTHO05D004746 7.1e-99 364.8 410 50.0
arahy.Tifrunner.gnm1.ann1.J5HH0A Arachis hypogaea HOM05D003933 ORTHO05D004746 9.3e-99 364.4 396 49.2
Glyma.09G282800 Glycine max HOM05D003933 ORTHO05D004746 1.6e-98 363.6 394 49.0
vmacro10628 Vaccinium macrocarpon HOM05D003933 ORTHO05D004746 2.1e-98 363.2 407 49.1
Os02g0634600 Oryza sativa ssp. japonica HOM05D003933 ORTHO05D004746 3.5e-98 362.5 396 49.7
Nitab4.5_0000934g0120 Nicotiana tabacum HOM05D003933 ORTHO05D004746 1.0e-97 360.9 398 50.8
Hma1.2p1_0933F.1_g238310 Hydrangea macrophylla HOM05D003933 ORTHO05D004746 1.7e-97 360.1 403 50.1
Hma1.2p1_2428F.1_g321995 Hydrangea macrophylla HOM05D003933 ORTHO05D004746 1.7e-97 360.1 403 50.1
CANSAT78G0638 Cannabis sativa HOM05D003933 ORTHO05D004746 2.3e-97 359.8 398 49.0
MELO3C024011.2 Cucumis melo HOM05D003933 ORTHO05D004746 3.0e-97 359.4 413 49.4
arahy.Tifrunner.gnm1.ann1.3AB2AC Arachis hypogaea HOM05D003933 ORTHO05D004746 6.6e-97 358.2 375 50.7
arahy.Tifrunner.gnm1.ann1.E3G1QY Arachis hypogaea HOM05D003933 ORTHO05D004746 1.1e-96 357.5 375 50.7
Haze_11764 Corylus avellana HOM05D003933 ORTHO05D004746 2.5e-96 356.3 417 48.7
Phvul.003G004900 Phaseolus vulgaris HOM05D003933 ORTHO05D004746 4.3e-96 355.5 393 48.1
Nitab4.5_0004707g0060 Nicotiana tabacum HOM05D003933 ORTHO05D004746 5.6e-96 355.1 387 51.2
Psat6g135760 Pisum sativum HOM05D003933 ORTHO05D004746 1.6e-95 353.6 395 48.1
VMungo0251G2024 Vigna mungo HOM05D003933 ORTHO05D004746 8.1e-95 351.3 414 46.1
FAN12G2057 Fragaria x ananassa HOM05D003933 ORTHO05D004746 1.1e-94 350.9 373 52.5
Cpa.g.sc0.130 Carica papaya HOM05D003933 ORTHO05D004746 1.4e-94 350.5 469 44.3
ATR0618G423 Amborella trichopoda HOM05D003933 ORTHO05D004746 3.1e-94 349.4 396 48.5
Lj2g0026122 Lotus japonicus HOM05D003933 ORTHO05D004746 4.0e-94 349.0 399 47.9
Lj3g0018867 Lotus japonicus HOM05D003933 ORTHO05D004746 4.0e-94 349.0 389 48.3
TPR.G29790 Trifolium pratense HOM05D003933 ORTHO05D004746 5.3e-94 348.6 395 48.1
Ca_19016_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 9.0e-94 347.8 371 49.3
Gorai.005G210900 Gossypium raimondii HOM05D003933 ORTHO05D004746 1.2e-93 347.4 365 51.2
Ca_07914_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 2.0e-93 346.7 386 47.9
Gohir.D02G188200 Gossypium hirsutum HOM05D003933 ORTHO05D004746 2.6e-93 346.3 367 51.2
Lj3g0001561 Lotus japonicus HOM05D003933 ORTHO05D004746 3.4e-93 345.9 389 48.3
Gohir.A03G165000 Gossypium hirsutum HOM05D003933 ORTHO05D004746 5.8e-93 345.1 373 50.1
Medtr4g075120 Medicago truncatula HOM05D003933 ORTHO05D004746 1.7e-92 343.6 366 50.5
Peaxi162Scf00160g00123 Petunia axillaris HOM05D003933 ORTHO05D004746 3.8e-92 342.4 355 53.0
DCAR_030211 Daucus carota HOM05D003933 ORTHO05D004746 2.4e-91 339.7 353 51.8
Medtr1g037570 Medicago truncatula HOM05D003933 ORTHO05D004746 4.2e-91 339.0 395 46.6
Glyma.11G100000 Glycine max HOM05D003933 ORTHO05D004746 6.0e-90 335.1 382 48.4
unitig_26.g10014 Utricularia gibba HOM05D003933 ORTHO05D004746 6.6e-89 331.6 385 46.5
Lalb_Chr19g0139431 Lupinus albus HOM05D003933 ORTHO05D004746 1.1e-88 330.9 376 48.1
CiPaw.06G061200 Carya illinoinensis HOM05D003933 ORTHO05D004746 7.6e-85 318.2 336 53.6
VMungo1127G0010 Vigna mungo HOM05D003933 ORTHO05D004746 2.9e-84 316.2 369 46.6
CARHR204870 Cardamine hirsuta HOM05D003933 ORTHO05D004746 7.1e-83 311.6 244 68.0
Sabra05G0076300 Salix brachista HOM05D003933 ORTHO05D004746 9.3e-83 311.2 332 51.5
HPP92_008573 Vanilla planifolia HOM05D003933 ORTHO05D004746 2.7e-82 309.7 324 49.4
Lj3g0003114 Lotus japonicus HOM05D003933 ORTHO05D004746 5.1e-81 305.4 366 46.7
Lj3g0021014 Lotus japonicus HOM05D003933 ORTHO05D004746 5.1e-81 305.4 366 46.7
Lj3g0017683 Lotus japonicus HOM05D003933 ORTHO05D004746 1.1e-80 304.3 366 46.4
MBI06_g23608_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 2.1e-79 300.1 349 47.3
Potri.005G092100 Populus trichocarpa HOM05D003933 ORTHO05D004746 3.7e-79 299.3 372 46.2
TPR.G25000 Trifolium pratense HOM05D003933 ORTHO05D004746 1.8e-78 297.0 318 49.4
GSVIVG01026245001 Vitis vinifera HOM05D003933 ORTHO05D004746 1.1e-72 277.7 348 47.1
Dinv17619 Davidia involucrata HOM05D003933 ORTHO05D004746 9.6e-72 274.6 249 59.8
MBI06_g32507_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 3.7e-71 272.7 270 52.2
Psat7g177760 Pisum sativum HOM05D003933 ORTHO05D004746 1.1e-70 271.2 305 48.2
Ca_20843_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 3.4e-69 266.2 314 46.8
FAN17G2963 Fragaria x ananassa HOM05D003933 ORTHO05D004746 3.4e-69 266.2 271 52.8
Sopen12g030430 Solanum pennellii HOM05D003933 ORTHO05D004746 1.1e-67 261.2 244 57.0
Zm00001eb248160 Zea mays HOM05D003933 ORTHO05D004746 1.0e-65 254.6 264 50.0
SEGI_04055 Sequoiadendron giganteum HOM05D003933 ORTHO05D004746 1.8e-65 253.8 365 38.4
Mapoly0072s0109 Marchantia polymorpha HOM05D003933 ORTHO05D004746 8.7e-65 251.5 375 38.9
SMO364G0332 Selaginella moellendorffii HOM05D003933 ORTHO05D004746 2.4e-62 243.4 377 37.7
CSS0027256 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 6.9e-62 241.9 237 52.7
Sed0007936 Sechium edule HOM05D003933 ORTHO05D004746 1.4e-59 234.2 259 51.7
AagrBONN_evm.TU.Sc2ySwM_117.4016 Anthoceros agrestis HOM05D003933 ORTHO05D004746 1.8e-57 227.3 391 36.6
CSS0006186 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 5.1e-57 225.7 256 48.4
Pp3c10_5850 Physcomitrium patens HOM05D003933 ORTHO05D004746 1.3e-55 221.1 388 35.6
CDE08G0738 Ceratophyllum demersum HOM05D003933 ORTHO05D004746 1.8e-54 217.2 222 51.8
CSS0049411 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 4.5e-53 212.6 229 50.7
CSS0013970 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 7.7e-53 211.8 265 45.7
CBR_g6576 Chara braunii HOM05D003933 ORTHO05D004746 1.3e-44 184.5 414 30.7
SHI31071 Sapria himalayana HOM05D003933 ORTHO05D004746 9.4e-43 178.3 285 41.1
PGSC0003DMG400011553 Solanum tuberosum HOM05D003933 ORTHO05D004746 8.8e-41 171.8 157 56.7
MD16G1003200 Malus domestica HOM05D003933 ORTHO05D004746 4.8e-39 166.0 342 35.1
Sc10g0005110 Simmondsia chinensis HOM05D003933 ORTHO05D004746 7.0e-38 162.2 187 46.5
C06p10890 Brassica napus HOM05D003933 ORTHO05D004746 2.5e-35 153.7 229 40.6
C02p60970 Brassica napus HOM05D003933 ORTHO05D004746 2.7e-34 150.2 229 41.9
Nn7g37760 Nelumbo nucifera HOM05D003933 ORTHO05D004746 4.4e-32 142.9 155 52.3
BcaC03g18034 Brassica carinata HOM05D003933 ORTHO05D004746 6.3e-31 139.0 319 34.2
Sc10g0005100 Simmondsia chinensis HOM05D003933 ORTHO05D004746 2.4e-30 137.1 114 63.2
Oeu044350.1 Olea europaea HOM05D003933 ORTHO05D004746 9.1e-30 135.2 96 68.8
MCO06G263 Micromonas commoda HOM05D003933 ORTHO05D004746 1.6e-26 124.4 427 25.8
CDE08G1244 Ceratophyllum demersum HOM05D003933 ORTHO05D004746 4.4e-24 116.3 102 55.9
CARHR204860 Cardamine hirsuta HOM05D003933 ORTHO05D004746 1.8e-22 110.9 79 77.2
Cre02.g086076 Chlamydomonas reinhardtii HOM05D003933 ORTHO05D004746 5.9e-21 105.9 174 33.3
COL.COLO4_20883 Corchorus olitorius HOM05D003933 ORTHO05D004746 1.5e-19 101.3 81 59.3
A02p41110 Brassica napus HOM05D003933 ORTHO05D004746 1.0e-17 95.1 68 67.6
BcaC03g13212 Brassica carinata HOM05D003933 ORTHO05D004746 1.0e-12 78.6 81 54.3
MBI06_g42297_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 5.0e-12 76.3 104 41.3
SEGI_32331 Sequoiadendron giganteum HOM05D003933 ORTHO05D004746 8.6e-12 75.5 93 40.9
BcaC07g41303 Brassica carinata HOM05D004977 ORTHO05D006454 4.3e-11 73.2 79 57.0
Dinv17620 Davidia involucrata HOM05D003933 ORTHO05D028341 9.5e-11 72.0 40 80.0
COL.COLO4_20881 Corchorus olitorius HOM05D003933 ORTHO05D004746 5.2e-09 66.2 56 60.7
BolC2t12147H Brassica oleracea HOM05D003933 ORTHO05D028341 1.2e-08 65.1 37 81.1
C02p60980 Brassica napus HOM05D003933 ORTHO05D004746 3.2e-06 57.0 52 61.5


User provided reference genes

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