Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p26630 Brassica napus HOM05D008824 ORTHO05D003125 9.5e-75 283.5 150 100.0
C09p65790 Brassica napus HOM05D008824 ORTHO05D003125 9.5e-75 283.5 150 100.0
BcaC04g19263 Brassica carinata HOM05D008824 ORTHO05D003125 4.7e-74 281.2 150 98.7
BolC9t59401H Brassica oleracea HOM05D008824 ORTHO05D003125 4.7e-74 281.2 150 98.7
BraA10t44721Z Brassica rapa HOM05D008824 ORTHO05D003125 1.8e-73 279.3 150 99.3
BcaNung07098 Brassica carinata HOM05D008824 ORTHO05D003125 2.6e-64 248.8 153 89.5
Thhalv10016092m.g Eutrema salsugineum HOM05D008824 ORTHO05D003125 7.8e-61 237.3 155 84.5
A03p04850 Brassica napus HOM05D008824 ORTHO05D003125 2.5e-59 232.3 153 86.9
BraA03t09824Z Brassica rapa HOM05D008824 ORTHO05D003125 2.5e-59 232.3 153 86.9
BcaB01g05491 Brassica carinata HOM05D008824 ORTHO05D003125 1.4e-57 226.5 153 82.4
BolC3t13066H Brassica oleracea HOM05D008824 ORTHO05D003125 1.4e-57 226.5 153 82.4
Sp6g32430 Schrenkiella parvula HOM05D008824 ORTHO05D003125 3.1e-57 225.3 153 86.3
BcaB01g06316 Brassica carinata HOM05D008824 ORTHO05D003125 4.0e-57 224.9 153 81.7
BcaNung01909 Brassica carinata HOM05D008824 ORTHO05D003125 5.2e-57 224.6 151 83.4
BcaNung01911 Brassica carinata HOM05D008824 ORTHO05D003125 5.2e-57 224.6 151 83.4
AL6G21690 Arabidopsis lyrata HOM05D008824 ORTHO05D003125 2.0e-56 222.6 155 76.1
CARHR202220 Cardamine hirsuta HOM05D008824 ORTHO05D003125 4.4e-56 221.5 160 81.2
C03p05580 Brassica napus HOM05D008824 ORTHO05D003125 2.2e-55 219.2 153 83.0
BraA02t05065Z Brassica rapa HOM05D008824 ORTHO05D003125 8.4e-55 217.2 152 82.2
AT5G11070 Arabidopsis thaliana HOM05D008824 ORTHO05D003125 1.1e-54 216.9 156 75.6
Aa31LG3G16070 Aethionema arabicum HOM05D008824 ORTHO05D003125 4.1e-54 214.9 152 73.0
Carub.0006s0958 Capsella rubella HOM05D008824 ORTHO05D003125 5.4e-54 214.5 166 77.7
A02p00820 Brassica napus HOM05D008824 ORTHO05D003125 6.9e-41 171.0 123 80.5
BcaC03g13348 Brassica carinata HOM05D008824 ORTHO05D003125 1.2e-40 170.2 134 73.9
C02p04840 Brassica napus HOM05D008824 ORTHO05D003125 1.2e-40 170.2 134 73.9
BolC2t06442H Brassica oleracea HOM05D008824 ORTHO05D003125 2.0e-40 169.5 134 73.1
THA.LOC104815009 Tarenaya hassleriana HOM05D008824 ORTHO05D003125 2.0e-40 169.5 150 63.3
THA.LOC104814116 Tarenaya hassleriana HOM05D008824 ORTHO05D003125 2.6e-40 169.1 139 64.7
Manes.16G125900 Manihot esculenta HOM05D008824 ORTHO05D003125 7.6e-16 87.8 148 38.5
Cfa013102 Carpinus fangiana HOM05D003969 ORTHO05D003125 5.5e-14 81.6 138 42.8
QL02p020337 Quercus lobata HOM05D008824 ORTHO05D003125 9.3e-14 80.9 141 36.9
CiPaw.07G226900 Carya illinoinensis HOM05D003969 ORTHO05D003125 3.6e-13 79.0 142 43.0
Cpa.g.sc187.25 Carica papaya HOM05D008824 ORTHO05D003125 4.6e-13 78.6 137 40.1
Haze_21463 Corylus avellana HOM05D008824 ORTHO05D003125 7.9e-13 77.8 138 41.3
Manes.03G012100 Manihot esculenta HOM05D003969 ORTHO05D003125 2.5e-11 72.8 142 36.6
Thecc.09G019700 Theobroma cacao HOM05D003969 ORTHO05D003125 1.3e-10 70.5 140 35.7
COL.COLO4_18912 Corchorus olitorius HOM05D003969 ORTHO05D003125 4.8e-10 68.6 149 36.2
Sabra18G0025300 Salix brachista HOM05D008824 ORTHO05D003125 4.1e-09 65.5 149 32.9
Atru.chr7.2498 Acer truncatum HOM05D003969 ORTHO05D003125 6.9e-09 64.7 147 38.1
Nn2g12243 Nelumbo nucifera HOM05D003969 ORTHO05D003125 6.9e-09 64.7 140 35.7
CsaV3_4G036890 Cucumis sativus L. HOM05D003969 ORTHO05D003125 1.5e-08 63.5 122 38.5
Potri.003G070750 Populus trichocarpa HOM05D008824 ORTHO05D003125 1.5e-08 63.5 148 32.4
Potri.006G259200 Populus trichocarpa HOM05D008824 ORTHO05D003125 2.6e-08 62.8 151 29.8
ClCG05G016610 Citrullus lanatus HOM05D003969 ORTHO05D003125 4.5e-08 62.0 126 37.3
TAR383G0074 Trochodendron aralioides HOM05D003969 ORTHO05D003125 4.5e-08 62.0 128 35.2
TAR626G0029 Trochodendron aralioides HOM05D003969 ORTHO05D003125 7.7e-08 61.2 129 34.9
Sabra06G0202600 Salix brachista HOM05D008824 ORTHO05D003125 1.7e-07 60.1 151 28.5
TAR636G2249 Trochodendron aralioides HOM05D003969 ORTHO05D003125 1.7e-07 60.1 118 34.7
Migut.A00008 Erythranthe guttata HOM05D003969 ORTHO05D003125 2.9e-07 59.3 117 35.9
PGR031G2169 Punica granatum HOM05D003969 ORTHO05D003125 2.9e-07 59.3 143 35.0
CSS0007982 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 3.8e-07 58.9 113 31.9
ClCG08G013530 Citrullus lanatus HOM05D008824 ORTHO05D003125 3.8e-07 58.9 128 33.6
Gohir.A05G056900 Gossypium hirsutum HOM05D003969 ORTHO05D003125 3.8e-07 58.9 147 32.0
Hma1.2p1_1784F.1_g302146 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 3.8e-07 58.9 102 35.3
Hma1.2p1_1784F.1_g302150 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 3.8e-07 58.9 102 35.3
Lalb_Chr24g0402081 Lupinus albus HOM05D013068 ORTHO05D003125 5.0e-07 58.5 143 30.8
Gorai.009G060100 Gossypium raimondii HOM05D003969 ORTHO05D003125 6.5e-07 58.2 127 32.3
TAR625G0404 Trochodendron aralioides HOM05D003969 ORTHO05D003125 8.5e-07 57.8 130 35.4
Peaxi162Scf00315g00011 Petunia axillaris HOM05D003969 ORTHO05D003125 1.1e-06 57.4 151 29.8
PGSC0003DMG400029901 Solanum tuberosum HOM05D003969 ORTHO05D003125 1.1e-06 57.4 41 63.4
Gohir.D05G059000 Gossypium hirsutum HOM05D003969 ORTHO05D003125 1.9e-06 56.6 127 31.5
Oeu010893.1 Olea europaea HOM05D003969 ORTHO05D003125 1.9e-06 56.6 112 33.9
MELO3C030306.2 Cucumis melo HOM05D008824 ORTHO05D003125 2.5e-06 56.2 95 41.1
CANSAT01G2013 Cannabis sativa HOM05D008824 ORTHO05D003125 3.2e-06 55.8 90 42.2
Eucgr.C01687 Eucalyptus grandis HOM05D003969 ORTHO05D003125 3.2e-06 55.8 91 44.0
Eucgr.C01695 Eucalyptus grandis HOM05D003969 ORTHO05D003125 3.2e-06 55.8 89 44.9
Eucgr.C01632 Eucalyptus grandis HOM05D003969 ORTHO05D003125 4.2e-06 55.5 91 44.0
Eucgr.C01699 Eucalyptus grandis HOM05D003969 ORTHO05D003125 4.2e-06 55.5 91 44.0
Peaxi162Scf00116g00085 Petunia axillaris HOM05D003969 ORTHO05D003125 4.2e-06 55.5 44 63.6
Sc23g0006560 Simmondsia chinensis HOM05D003969 ORTHO05D003125 4.2e-06 55.5 105 36.2
Eucgr.C01639 Eucalyptus grandis HOM05D003969 ORTHO05D003125 5.5e-06 55.1 91 44.0
Eucgr.L03259 Eucalyptus grandis HOM05D003969 ORTHO05D003125 5.5e-06 55.1 89 43.8
Lsat_1_v5_gn_8_63081 Lactuca sativa HOM05D003969 ORTHO05D003125 5.5e-06 55.1 98 38.8
Eucgr.C01690 Eucalyptus grandis HOM05D003969 ORTHO05D003125 7.2e-06 54.7 91 41.8
HanXRQChr05g0141561 Helianthus annuus HOM05D003969 ORTHO05D003125 7.2e-06 54.7 120 35.8
Actinidia04245 Actinidia chinensis HOM05D003969 ORTHO05D003125 9.4e-06 54.3 93 41.9
Dinv15887 Davidia involucrata HOM05D003969 ORTHO05D003125 9.4e-06 54.3 122 33.6
Gohir.D07G034000 Gossypium hirsutum HOM05D003969 ORTHO05D003125 9.4e-06 54.3 126 31.7
Gorai.001G035600 Gossypium raimondii HOM05D003969 ORTHO05D003125 9.4e-06 54.3 126 31.7


User provided reference genes

Program Settings