Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p26310 Brassica napus HOM05D004036 ORTHO05D004576 1.3e-97 359.8 188 100.0
BcaC04g19226 Brassica carinata HOM05D004036 ORTHO05D004576 3.2e-88 328.6 189 94.7
C09p65420 Brassica napus HOM05D004036 ORTHO05D004576 4.7e-87 324.7 190 94.2
BolC9t59367H Brassica oleracea HOM05D004036 ORTHO05D004576 4.7e-87 324.7 190 94.2
BraA10t44688Z Brassica rapa HOM05D004036 ORTHO05D004576 1.7e-84 316.2 192 91.1
BcaB08g37059 Brassica carinata HOM05D004036 ORTHO05D004576 9.5e-64 247.3 174 81.6
Sp6g32160 Schrenkiella parvula HOM05D004036 ORTHO05D004576 1.1e-59 233.8 172 77.3
BcaB01g06306 Brassica carinata HOM05D004036 ORTHO05D004576 6.6e-57 224.6 172 75.6
A03p05000 Brassica napus HOM05D004036 ORTHO05D004576 2.5e-56 222.6 172 72.7
C03p05740 Brassica napus HOM05D004036 ORTHO05D004576 3.3e-56 222.2 172 72.7
BcaB01g05484 Brassica carinata HOM05D004036 ORTHO05D004576 3.6e-55 218.8 172 71.5
BolC3t13087H Brassica oleracea HOM05D004036 ORTHO05D004576 6.1e-55 218.0 172 71.5
BcaC03g13367 Brassica carinata HOM05D004036 ORTHO05D004576 1.3e-52 210.3 160 76.9
Thhalv10014836m.g Eutrema salsugineum HOM05D004036 ORTHO05D004576 5.4e-51 204.9 178 71.9
BcaNung01927 Brassica carinata HOM05D004036 ORTHO05D004576 9.2e-51 204.1 172 72.1
AL6G22100 Arabidopsis lyrata HOM05D004036 ORTHO05D004576 7.8e-50 201.1 176 71.0
Carub.0006s0989 Capsella rubella HOM05D004036 ORTHO05D004576 1.1e-48 197.2 172 70.9
AT5G11440 Arabidopsis thaliana HOM05D004036 ORTHO05D004576 1.6e-47 193.4 174 69.5
A02p01010 Brassica napus HOM05D004036 ORTHO05D004576 2.1e-47 193.0 173 70.5
BraA02t05082Z Brassica rapa HOM05D004036 ORTHO05D004576 2.1e-47 193.0 173 70.5
CARHR201790 Cardamine hirsuta HOM05D004036 ORTHO05D004576 1.2e-45 187.2 178 66.3
C02p05040 Brassica napus HOM05D004036 ORTHO05D004576 2.2e-44 183.0 160 70.0
Aa31LG3G15750 Aethionema arabicum HOM05D004036 ORTHO05D004576 3.1e-38 162.5 181 54.7
Thhalv10004997m.g Eutrema salsugineum HOM05D004036 ORTHO05D004576 1.1e-35 154.1 186 52.7
Sp2g22000 Schrenkiella parvula HOM05D004036 ORTHO05D004576 4.3e-32 142.1 174 51.1
C07p42280 Brassica napus HOM05D004036 ORTHO05D004576 2.4e-30 136.3 182 51.1
BolC7t44757H Brassica oleracea HOM05D004036 ORTHO05D004576 5.2e-30 135.2 181 50.8
A06p36250 Brassica napus HOM05D004036 ORTHO05D004576 1.7e-28 130.2 183 50.3
BraA06t26547Z Brassica rapa HOM05D004036 ORTHO05D004576 1.7e-28 130.2 183 50.3
Aa31LG11G4630 Aethionema arabicum HOM05D004036 ORTHO05D004576 2.9e-28 129.4 188 50.5
BcaNung07259 Brassica carinata HOM05D000175 ORTHO05D000481 1.1e-27 127.5 154 49.4
AL6G37340 Arabidopsis lyrata HOM05D004036 ORTHO05D004576 7.1e-27 124.8 192 49.0
CARHR187840 Cardamine hirsuta HOM05D004036 ORTHO05D004576 2.7e-26 122.9 156 49.4
THA.LOC104799217 Tarenaya hassleriana HOM05D004036 ORTHO05D004576 3.5e-26 122.5 169 46.7
BolC2t12008H Brassica oleracea HOM05D004036 ORTHO05D004576 6.6e-25 118.2 161 45.3
THA.LOC104815044 Tarenaya hassleriana HOM05D004036 ORTHO05D004576 3.3e-24 115.9 184 43.5
AT5G25540 Arabidopsis thaliana HOM05D004036 ORTHO05D004576 5.6e-24 115.2 187 46.0
C02p59450 Brassica napus HOM05D004036 ORTHO05D004576 5.6e-24 115.2 170 47.6
A02p39670 Brassica napus HOM05D004036 ORTHO05D004576 2.1e-23 113.2 170 47.1
BraA02t08932Z Brassica rapa HOM05D004036 ORTHO05D004576 2.1e-23 113.2 170 47.1
BcaB07g29991 Brassica carinata HOM05D004036 ORTHO05D004576 3.6e-23 112.5 163 46.6
Manes.16G068200 Manihot esculenta HOM05D004036 ORTHO05D004576 6.9e-22 108.2 197 40.6
BcaB04g19786 Brassica carinata HOM05D004036 ORTHO05D004576 5.8e-21 105.1 145 46.2
Carub.0006s2340 Capsella rubella HOM05D004036 ORTHO05D004576 5.8e-21 105.1 193 44.0
Duzib187G1985 Durio zibethinus HOM05D004036 ORTHO05D004576 7.6e-21 104.8 200 39.5
Gohir.D01G158400 Gossypium hirsutum HOM05D004036 ORTHO05D004576 7.6e-21 104.8 169 43.8
Duzib150G0431 Durio zibethinus HOM05D004036 ORTHO05D004576 9.9e-21 104.4 200 40.5
TWI63G0992 Tripterygium wilfordii HOM05D004036 ORTHO05D004576 9.9e-21 104.4 183 41.0
COL.COLO4_24066 Corchorus olitorius HOM05D004036 ORTHO05D004576 6.4e-20 101.7 197 38.1
BolC2t06459H Brassica oleracea HOM05D004036 ORTHO05D004576 1.4e-19 100.5 96 63.5
Atru.chr7.2325 Acer truncatum HOM05D004036 ORTHO05D004576 2.4e-19 99.8 189 40.2
Gohir.D06G047900 Gossypium hirsutum HOM05D004036 ORTHO05D004576 3.2e-19 99.4 200 38.5
Gohir.D05G011350 Gossypium hirsutum HOM05D004036 ORTHO05D004576 5.4e-19 98.6 145 40.0
Thecc.09G144100 Theobroma cacao HOM05D004036 ORTHO05D004576 7.1e-19 98.2 199 37.7
Ciclev10009480m.g Citrus clementina HOM05D004036 ORTHO05D004576 1.2e-18 97.4 220 37.7
Gohir.A12G241700 Gossypium hirsutum HOM05D004036 ORTHO05D004576 1.6e-18 97.1 179 43.0
Gorai.008G052900 Gossypium raimondii HOM05D004036 ORTHO05D004576 2.1e-18 96.7 184 42.4
Gohir.A06G047900 Gossypium hirsutum HOM05D004036 ORTHO05D004576 2.7e-18 96.3 200 37.5
Glyma.14G129200 Glycine max HOM05D004036 ORTHO05D004576 3.5e-18 95.9 190 38.9
Glyma.17G203900 Glycine max HOM05D004036 ORTHO05D004576 3.5e-18 95.9 194 37.1
Gorai.009G011700 Gossypium raimondii HOM05D004036 ORTHO05D004576 3.5e-18 95.9 179 41.9
Hma1.2p1_0003F.1_g003650 Hydrangea macrophylla HOM05D004036 ORTHO05D004576 3.5e-18 95.9 185 37.3
Gohir.D12G195700 Gossypium hirsutum HOM05D004036 ORTHO05D004576 4.6e-18 95.5 178 41.6
Phvul.001G055700 Phaseolus vulgaris HOM05D004036 ORTHO05D004576 6.0e-18 95.1 195 35.9
Gorai.004G151900 Gossypium raimondii HOM05D004036 ORTHO05D004576 7.8e-18 94.7 187 39.0
TWI34G1922 Tripterygium wilfordii HOM05D004036 ORTHO05D004576 1.7e-17 93.6 182 36.8
Gohir.D05G335100 Gossypium hirsutum HOM05D004036 ORTHO05D004576 2.3e-17 93.2 183 38.3
Potri.006G246600 Populus trichocarpa HOM05D004036 ORTHO05D004576 2.3e-17 93.2 198 35.9
Gohir.A12G126300 Gossypium hirsutum HOM05D004036 ORTHO05D004576 3.0e-17 92.8 177 37.9
Eucgr.C01818 Eucalyptus grandis HOM05D004036 ORTHO05D004576 3.9e-17 92.4 192 37.5
Gohir.A05G010600 Gossypium hirsutum HOM05D004036 ORTHO05D004576 3.9e-17 92.4 179 39.1
Gohir.D09G022200 Gossypium hirsutum HOM05D004036 ORTHO05D004576 3.9e-17 92.4 178 39.3
Gohir.A11G185400 Gossypium hirsutum HOM05D004036 ORTHO05D004576 5.1e-17 92.0 179 38.5
Manes.03G064800 Manihot esculenta HOM05D004036 ORTHO05D004576 5.1e-17 92.0 211 35.5
CiPaw.08G015700 Carya illinoinensis HOM05D004036 ORTHO05D004576 6.6e-17 91.7 199 36.7
Gohir.D09G023175 Gossypium hirsutum HOM05D004036 ORTHO05D004576 6.6e-17 91.7 179 38.5
Medtr1g011280 Medicago truncatula HOM05D004036 ORTHO05D004576 6.6e-17 91.7 183 37.2
ECA240G1837 Erigeron canadensis HOM05D004036 ORTHO05D004576 8.7e-17 91.3 168 36.3
Sabra18G0035300 Salix brachista HOM05D004036 ORTHO05D004576 1.5e-16 90.5 199 34.2
Cpa.g.sc91.6 Carica papaya HOM05D004036 ORTHO05D004576 1.9e-16 90.1 132 46.2
Cfa013210 Carpinus fangiana HOM05D004036 ORTHO05D004576 1.9e-16 90.1 191 37.2
FAN20G2367 Fragaria x ananassa HOM05D004036 ORTHO05D004576 1.9e-16 90.1 190 35.8
C09p06800 Brassica napus HOM05D004036 ORTHO05D004576 3.3e-16 89.4 139 43.2
BolC9t53601H Brassica oleracea HOM05D004036 ORTHO05D004576 3.3e-16 89.4 139 43.2
FvH4_2g30160 Fragaria vesca HOM05D004036 ORTHO05D004576 3.3e-16 89.4 190 35.8
FAN24G0425 Fragaria x ananassa HOM05D004036 ORTHO05D004576 3.3e-16 89.4 190 35.8
FAN27G0504 Fragaria x ananassa HOM05D004036 ORTHO05D004576 3.3e-16 89.4 190 36.3
Prupe.1G466700 Prunus persica HOM05D004036 ORTHO05D004576 3.3e-16 89.4 196 34.7
Hma1.2p1_0175F.1_g077210 Hydrangea macrophylla HOM05D004036 ORTHO05D004576 4.3e-16 89.0 179 35.2
TAR624G0048 Trochodendron aralioides HOM05D004036 ORTHO05D004576 4.3e-16 89.0 208 33.7
VMungo0647G1622 Vigna mungo HOM05D004036 ORTHO05D004576 4.3e-16 89.0 88 54.5
FAN15G1681 Fragaria x ananassa HOM05D004036 ORTHO05D004576 5.6e-16 88.6 190 35.3
Lsat_1_v5_gn_3_108141 Lactuca sativa HOM05D004036 ORTHO05D004576 5.6e-16 88.6 143 37.1
arahy.Tifrunner.gnm1.ann1.AAJ54F Arachis hypogaea HOM05D004036 ORTHO05D004576 7.3e-16 88.2 173 35.8
RcHm_v2.0_Chr6g0312751 Rosa chinensis HOM05D004036 ORTHO05D004576 9.6e-16 87.8 89 56.2
Dinv35883 Davidia involucrata HOM05D004036 ORTHO05D004576 1.6e-15 87.0 105 48.6
arahy.Tifrunner.gnm1.ann1.7NC9IZ Arachis hypogaea HOM05D004036 ORTHO05D004576 2.8e-15 86.3 172 36.6
Lalb_Chr23g0269031 Lupinus albus HOM05D004036 ORTHO05D004576 3.6e-15 85.9 173 38.2
DCAR_003061 Daucus carota HOM05D004036 ORTHO05D004576 6.2e-15 85.1 199 36.7
QL12p031289 Quercus lobata HOM05D004036 ORTHO05D004576 6.2e-15 85.1 95 49.5
CANSAT56G2568 Cannabis sativa HOM05D004036 ORTHO05D004576 8.1e-15 84.7 178 34.8
SGA_v2.0_scaffold163G38098 Striga asiatica HOM05D004036 ORTHO05D004576 8.1e-15 84.7 201 34.3
C01p19860 Brassica napus HOM05D004036 ORTHO05D004576 1.8e-14 83.6 116 46.6
BolC1t01914H Brassica oleracea HOM05D004036 ORTHO05D004576 1.8e-14 83.6 116 46.6
TPR.G20095 Trifolium pratense HOM05D004036 ORTHO05D004576 1.8e-14 83.6 194 35.1
Peaxi162Scf00105g01426 Petunia axillaris HOM05D004036 ORTHO05D004576 2.4e-14 83.2 102 49.0
PGR031G0366 Punica granatum HOM05D004036 ORTHO05D004576 4.0e-14 82.4 186 37.6
Lj5g0012132 Lotus japonicus HOM05D004036 ORTHO05D004576 5.3e-14 82.0 176 37.5
Nitab4.5_0006579g0060 Nicotiana tabacum HOM05D004036 ORTHO05D004576 5.3e-14 82.0 102 48.0
Nitab4.5_0000125g0270 Nicotiana tabacum HOM05D004036 ORTHO05D004576 6.9e-14 81.6 102 48.0
HanXRQChr13g0409481 Helianthus annuus HOM05D004036 ORTHO05D004576 9.0e-14 81.3 162 33.3
Oeu045176.1 Olea europaea HOM05D004036 ORTHO05D004576 1.2e-13 80.9 91 52.7
Sabra06G0192900 Salix brachista HOM05D004036 ORTHO05D004576 1.5e-13 80.5 206 34.0
C07p03200 Brassica napus HOM05D004036 ORTHO05D004576 2.6e-13 79.7 112 46.4
Lalb_Chr08g0243781 Lupinus albus HOM05D004036 ORTHO05D004576 2.6e-13 79.7 168 36.3
TAR626G0352 Trochodendron aralioides HOM05D004036 ORTHO05D004576 2.6e-13 79.7 93 43.0
PGSC0003DMG400033628 Solanum tuberosum HOM05D004036 ORTHO05D004576 3.4e-13 79.3 196 35.7
BolC7t40715H Brassica oleracea HOM05D004036 ORTHO05D004576 7.6e-13 78.2 112 45.5
BcaC09g50856 Brassica carinata HOM05D004036 ORTHO05D004576 1.3e-12 77.4 116 47.4
Aqoxy7G01846 Aquilegia oxysepala HOM05D004036 ORTHO05D004576 1.7e-12 77.0 153 37.9
CsaV3_3G046690 Cucumis sativus L. HOM05D004036 ORTHO05D004576 2.2e-12 76.6 203 32.5
MSTRG.1647 Avicennia marina HOM05D004036 ORTHO05D004576 3.8e-12 75.9 195 32.3
Haze_21623 Corylus avellana HOM05D004036 ORTHO05D004576 3.8e-12 75.9 237 30.4
Sopen08g021750 Solanum pennellii HOM05D004036 ORTHO05D004576 3.8e-12 75.9 186 33.3
CAN.G21.9 Capsicum annuum HOM05D004036 ORTHO05D004576 4.9e-12 75.5 96 49.0
Solyc08g067810.3 Solanum lycopersicum HOM05D004036 ORTHO05D004576 6.4e-12 75.1 186 33.3
Actinidia14638 Actinidia chinensis HOM05D004036 ORTHO05D004576 8.4e-12 74.7 99 45.5
Gorai.010G053700 Gossypium raimondii HOM05D004036 ORTHO05D004576 1.1e-11 74.3 147 37.4
HanXRQChr03g0077811 Helianthus annuus HOM05D004036 ORTHO05D004576 1.9e-11 73.6 78 47.4
Psat6g031000 Pisum sativum HOM05D004036 ORTHO05D004576 1.9e-11 73.6 94 43.6
EL10Ac2g02537 Beta vulgaris HOM05D004036 ORTHO05D004576 3.2e-11 72.8 172 31.4
MD08G1136600 Malus domestica HOM05D004036 ORTHO05D004576 3.2e-11 72.8 86 52.3
CiPaw.03G235800 Carya illinoinensis HOM05D004036 ORTHO05D004576 9.3e-11 71.2 206 31.6
QL02p086217 Quercus lobata HOM05D004036 ORTHO05D004576 9.3e-11 71.2 163 35.6
AUR62024838 Chenopodium quinoa HOM05D004036 ORTHO05D004576 1.6e-10 70.5 163 34.4
AUR62032381 Chenopodium quinoa HOM05D004036 ORTHO05D004576 1.6e-10 70.5 165 37.0
Cc08_g08300 Coffea canephora HOM05D004036 ORTHO05D004576 1.6e-10 70.5 197 33.0
Sc23g0007020 Simmondsia chinensis HOM05D004036 ORTHO05D004576 2.1e-10 70.1 135 35.6
Gohir.A07G032200 Gossypium hirsutum HOM05D004036 ORTHO05D004576 4.6e-10 68.9 123 37.4
Gohir.A08G237500 Gossypium hirsutum HOM05D004036 ORTHO05D004576 4.6e-10 68.9 123 37.4
vmacro05446 Vaccinium macrocarpon HOM05D004036 ORTHO05D004576 4.6e-10 68.9 135 39.3
GSVIVG01015440001 Vitis vinifera HOM05D004036 ORTHO05D004576 4.6e-10 68.9 90 47.8
DCAR_007682 Daucus carota HOM05D004036 ORTHO05D004576 6.0e-10 68.6 129 40.3
SalBow8G4507 Salvia bowleyana HOM05D004036 ORTHO05D004576 6.0e-10 68.6 87 44.8
SalBow8G4816 Salvia bowleyana HOM05D004036 ORTHO05D004576 6.0e-10 68.6 87 44.8
ClCG05G017210 Citrullus lanatus HOM05D004036 ORTHO05D004576 1.0e-09 67.8 99 45.5
Migut.E01501 Erythranthe guttata HOM05D004036 ORTHO05D004576 1.0e-09 67.8 88 44.3
MSTRG.14001 Avicennia marina HOM05D004036 ORTHO05D004576 1.8e-09 67.0 96 42.7
MELO3C003669.2 Cucumis melo HOM05D004036 ORTHO05D004576 2.3e-09 66.6 159 32.7
Gohir.D04G088301 Gossypium hirsutum HOM05D004036 ORTHO05D004576 3.9e-09 65.9 46 67.4
Gohir.D12G143101 Gossypium hirsutum HOM05D004036 ORTHO05D004576 3.9e-09 65.9 46 67.4
Sed0023915 Sechium edule HOM05D004036 ORTHO05D004576 8.7e-09 64.7 201 31.8
CSS0014753 Camellia sinensis var. sinensis HOM05D004036 ORTHO05D004576 1.1e-08 64.3 47 61.7
Ah.12g063370 Amaranthus hybridus HOM05D004036 ORTHO05D004576 1.5e-08 63.9 161 32.3
BraA08t33004Z Brassica rapa HOM05D004036 ORTHO05D004576 1.5e-08 63.9 54 64.8
Sed0025074 Sechium edule HOM05D004036 ORTHO05D004576 3.3e-08 62.8 144 35.4
BraA03t09836Z Brassica rapa HOM05D002580 ORTHO05D002811 5.6e-08 62.0 58 65.5
Glyma.06G073400 Glycine max HOM05D004036 ORTHO05D004576 1.3e-07 60.8 150 33.3
Hund25658 Selenicereus undatus HOM05D004036 ORTHO05D004576 1.3e-07 60.8 172 31.4
Nn8g39276 Nelumbo nucifera HOM05D004036 ORTHO05D004576 4.8e-07 58.9 152 29.6
MBI01_g10034_MAGBIO Magnolia biondii HOM05D004036 ORTHO05D004576 8.1e-07 58.2 126 35.7
Prupe.7G234300 Prunus persica HOM05D004036 ORTHO05D004576 8.1e-07 58.2 149 27.5
SGA_v2.0_scaffold169G38632 Striga asiatica HOM05D004036 ORTHO05D004576 8.1e-07 58.2 208 28.4
MBI04_g26645_MAGBIO Magnolia biondii HOM05D004036 ORTHO05D004576 4.0e-06 55.8 47 53.2
Phvul.009G097900 Phaseolus vulgaris HOM05D004036 ORTHO05D050263 6.9e-06 55.1 76 43.4


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