Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p26110 Brassica napus HOM05D006609 ORTHO05D008551 3.6e-152 541.6 280 100.0
BraA10t44672Z Brassica rapa HOM05D006609 ORTHO05D008551 5.4e-132 474.6 280 88.2
Sp6g31980 Schrenkiella parvula HOM05D006609 ORTHO05D008551 2.8e-128 462.2 280 85.7
Thhalv10014470m.g Eutrema salsugineum HOM05D006609 ORTHO05D008551 2.4e-127 459.1 280 84.6
AL6G22350 Arabidopsis lyrata HOM05D006609 ORTHO05D008551 4.0e-127 458.4 280 84.6
BcaC04g19208 Brassica carinata HOM05D006609 ORTHO05D008551 6.9e-127 457.6 280 86.4
BolC9t59347H Brassica oleracea HOM05D006609 ORTHO05D008551 6.9e-127 457.6 280 86.4
CARHR201580 Cardamine hirsuta HOM05D006609 ORTHO05D008551 4.6e-123 444.9 280 81.8
C09p65180 Brassica napus HOM05D006609 ORTHO05D008551 6.0e-123 444.5 280 85.0
A02p01130 Brassica napus HOM05D006609 ORTHO05D008551 3.0e-122 442.2 283 80.9
BraA02t05092Z Brassica rapa HOM05D006609 ORTHO05D008551 3.9e-122 441.8 284 80.6
BcaC03g13384 Brassica carinata HOM05D006609 ORTHO05D008551 4.3e-121 438.3 284 80.3
C02p05310 Brassica napus HOM05D006609 ORTHO05D008551 4.3e-121 438.3 284 80.3
BolC2t06479H Brassica oleracea HOM05D006609 ORTHO05D008551 1.6e-120 436.4 282 80.5
Carub.0006s1012 Capsella rubella HOM05D006609 ORTHO05D008551 6.9e-119 431.0 234 92.3
Aa31LG3G15550 Aethionema arabicum HOM05D006609 ORTHO05D008551 9.3e-116 420.6 278 76.3
BcaB08g37036 Brassica carinata HOM05D006609 ORTHO05D008551 4.2e-108 395.2 283 76.3
THA.LOC104808485 Tarenaya hassleriana HOM05D006609 ORTHO05D008551 1.1e-105 387.1 280 71.4
AT5G11640 Arabidopsis thaliana HOM05D006609 ORTHO05D008551 6.5e-93 344.7 216 82.9
Gohir.D05G047900 Gossypium hirsutum HOM05D006609 ORTHO05D008551 1.7e-80 303.5 284 54.9
Thecc.09G046100 Theobroma cacao HOM05D006609 ORTHO05D008551 3.5e-78 295.8 284 54.2
GSVIVG01035613001 Vitis vinifera HOM05D006609 ORTHO05D008551 2.2e-77 293.1 282 53.9
Duzib168G0257 Durio zibethinus HOM05D006609 ORTHO05D008551 2.9e-77 292.7 285 53.3
Gorai.009G049200 Gossypium raimondii HOM05D006609 ORTHO05D008551 5.0e-77 292.0 238 60.1
FvH4_2g35350 Fragaria vesca HOM05D006609 ORTHO05D008551 9.4e-76 287.7 285 52.6
RcHm_v2.0_Chr6g0306561 Rosa chinensis HOM05D006609 ORTHO05D008551 1.4e-74 283.9 285 53.0
Potri.006G237600 Populus trichocarpa HOM05D006609 ORTHO05D008551 1.1e-73 280.8 266 54.1
CiPaw.07G203500 Carya illinoinensis HOM05D006609 ORTHO05D008551 2.0e-73 280.0 284 51.4
MD15G1092400 Malus domestica HOM05D006609 ORTHO05D008551 5.7e-73 278.5 286 52.8
Actinidia13339 Actinidia chinensis HOM05D006609 ORTHO05D008551 7.4e-73 278.1 274 52.9
CSS0000910 Camellia sinensis var. sinensis HOM05D006609 ORTHO05D008551 7.4e-73 278.1 284 51.1
Manes.16G074700 Manihot esculenta HOM05D006609 ORTHO05D008551 1.7e-72 276.9 281 50.5
TWI63G1544 Tripterygium wilfordii HOM05D006609 ORTHO05D008551 4.8e-72 275.4 279 52.3
Cfa013375 Carpinus fangiana HOM05D006609 ORTHO05D008551 1.8e-71 273.5 282 49.6
BcaNung02663 Brassica carinata HOM05D006609 ORTHO05D008551 3.1e-71 272.7 174 79.9
Dinv27894 Davidia involucrata HOM05D006609 ORTHO05D008551 5.9e-70 268.5 241 57.7
FAN15G1983 Fragaria x ananassa HOM05D006609 ORTHO05D008551 2.9e-69 266.2 284 50.7
MD08G1113000 Malus domestica HOM05D006609 ORTHO05D008551 6.5e-69 265.0 285 50.5
COL.COLO4_20980 Corchorus olitorius HOM05D006609 ORTHO05D008551 8.5e-69 264.6 284 47.9
Eucgr.C00603 Eucalyptus grandis HOM05D006609 ORTHO05D008551 8.5e-69 264.6 231 59.3
CANSAT25G3446 Cannabis sativa HOM05D006609 ORTHO05D008551 5.5e-68 261.9 284 49.6
Ciclev10009282m.g Citrus clementina HOM05D006609 ORTHO05D008551 5.5e-68 261.9 276 49.6
FAN27G2415 Fragaria x ananassa HOM05D006609 ORTHO05D008551 7.2e-68 261.5 285 49.8
Hma1.2p1_1138F.1_g260815 Hydrangea macrophylla HOM05D006609 ORTHO05D008551 7.2e-68 261.5 239 55.6
TAR626G1286 Trochodendron aralioides HOM05D006609 ORTHO05D008551 2.7e-67 259.6 270 51.1
Aqoxy7G01461 Aquilegia oxysepala HOM05D006609 ORTHO05D008551 3.0e-66 256.1 280 48.6
FAN20G1237 Fragaria x ananassa HOM05D006609 ORTHO05D008551 3.0e-66 256.1 284 49.3
Atru.chr7.2079 Acer truncatum HOM05D006609 ORTHO05D008551 5.2e-66 255.4 238 53.8
Migut.A00197 Erythranthe guttata HOM05D006609 ORTHO05D008551 6.8e-66 255.0 270 48.9
Rhsim02G0176600 Rhododendron simsii HOM05D006609 ORTHO05D008551 8.8e-66 254.6 228 54.8
RhsimUnG0061900 Rhododendron simsii HOM05D006609 ORTHO05D008551 8.8e-66 254.6 228 54.8
Gohir.A05G046200 Gossypium hirsutum HOM05D006609 ORTHO05D008551 1.2e-65 254.2 212 59.4
MSTRG.25911 Avicennia marina HOM05D006609 ORTHO05D008551 2.0e-65 253.4 272 49.3
QL12p041270 Quercus lobata HOM05D006609 ORTHO05D008551 3.4e-65 252.7 231 54.1
MELO3C003467.2 Cucumis melo HOM05D006609 ORTHO05D008551 4.4e-65 252.3 276 48.9
ClCG11G015120 Citrullus lanatus HOM05D006609 ORTHO05D008551 5.7e-65 251.9 276 48.2
Hund03393 Selenicereus undatus HOM05D006609 ORTHO05D008551 5.7e-65 251.9 270 50.0
Lj1g0027455 Lotus japonicus HOM05D006609 ORTHO05D008551 9.8e-65 251.1 274 48.5
Sabra06G0185800 Salix brachista HOM05D006609 ORTHO05D008551 9.8e-65 251.1 317 45.1
Glyma.17G192700 Glycine max HOM05D006609 ORTHO05D008551 1.3e-64 250.8 277 48.0
arahy.Tifrunner.gnm1.ann1.TZ2NYQ Arachis hypogaea HOM05D006609 ORTHO05D008551 2.2e-64 250.0 285 49.1
MBI04_g06585_MAGBIO Magnolia biondii HOM05D006609 ORTHO05D008551 2.2e-64 250.0 282 47.2
arahy.Tifrunner.gnm1.ann1.519I88 Arachis hypogaea HOM05D006609 ORTHO05D008551 2.8e-64 249.6 285 49.1
Psat6g037080 Pisum sativum HOM05D006609 ORTHO05D008551 2.8e-64 249.6 277 48.4
Sopen12g031720 Solanum pennellii HOM05D006609 ORTHO05D008551 3.7e-64 249.2 270 48.5
PGR031G0123 Punica granatum HOM05D006609 ORTHO05D008551 6.3e-64 248.4 278 48.9
Lsat_1_v5_gn_6_22680 Lactuca sativa HOM05D006609 ORTHO05D008551 1.8e-63 246.9 266 50.4
Nn8g39112 Nelumbo nucifera HOM05D006609 ORTHO05D008551 1.8e-63 246.9 285 48.1
Peaxi162Scf00064g01521 Petunia axillaris HOM05D006609 ORTHO05D008551 2.4e-63 246.5 272 47.1
VMungo0647G0700 Vigna mungo HOM05D006609 ORTHO05D008551 4.1e-63 245.7 270 49.3
Lalb_Chr24g0402671 Lupinus albus HOM05D006609 ORTHO05D008551 5.4e-63 245.4 271 48.3
CsaV3_3G048520 Cucumis sativus L. HOM05D006609 ORTHO05D008551 9.1e-63 244.6 230 53.9
Ca_03364_v3 Cicer arietinum L. HOM05D006609 ORTHO05D008551 1.6e-62 243.8 277 48.0
Sc09g0009360 Simmondsia chinensis HOM05D006609 ORTHO05D008551 2.0e-62 243.4 270 48.9
CAN.G208.62 Capsicum annuum HOM05D006609 ORTHO05D008551 5.9e-62 241.9 270 47.8
Solyc12g095820.3 Solanum lycopersicum HOM05D006609 ORTHO05D008551 5.9e-62 241.9 227 53.3
SalBow4G0386 Salvia bowleyana HOM05D006609 ORTHO05D008551 7.7e-62 241.5 237 52.7
Sed0023433 Sechium edule HOM05D006609 ORTHO05D008551 1.7e-61 240.4 276 44.9
Cc08_g09720 Coffea canephora HOM05D006609 ORTHO05D008551 3.8e-61 239.2 272 49.6
Medtr1g007120 Medicago truncatula HOM05D006609 ORTHO05D008551 5.0e-61 238.8 275 47.3
PGSC0003DMG400029395 Solanum tuberosum HOM05D006609 ORTHO05D008551 5.0e-61 238.8 211 54.0
TPR.G24534 Trifolium pratense HOM05D006609 ORTHO05D008551 5.0e-61 238.8 277 47.7
Phvul.001G063300 Phaseolus vulgaris HOM05D006609 ORTHO05D008551 6.5e-61 238.4 276 45.7
Ah.16g105840 Amaranthus hybridus HOM05D006609 ORTHO05D008551 1.9e-60 236.9 274 45.6
AUR62042442 Chenopodium quinoa HOM05D006609 ORTHO05D008551 4.2e-60 235.7 270 45.9
Haze_21897 Corylus avellana HOM05D006609 ORTHO05D008551 7.2e-60 235.0 282 45.4
CDE02G0347 Ceratophyllum demersum HOM05D006609 ORTHO05D008551 9.4e-60 234.6 268 45.9
ATR0705G113 Amborella trichopoda HOM05D006609 ORTHO05D008551 8.0e-59 231.5 270 44.8
PSO824G0011 Papaver somniferum HOM05D006609 ORTHO05D008551 7.5e-57 224.9 280 42.9
PSO173G0006 Papaver somniferum HOM05D006609 ORTHO05D008551 9.8e-57 224.6 281 42.0
Cpa.g.sc78.16 Carica papaya HOM05D006609 ORTHO05D008551 2.8e-56 223.0 225 53.8
Os01g0200400 Oryza sativa ssp. japonica HOM05D006609 ORTHO05D008551 9.1e-55 218.0 262 45.8
HPP92_021778 Vanilla planifolia HOM05D006609 ORTHO05D008551 1.2e-54 217.6 267 43.4
SGA_v2.0_scaffold243G44286 Striga asiatica HOM05D006609 ORTHO05D008551 2.7e-54 216.5 269 44.2
Zm00001eb337980 Zea mays HOM05D006609 ORTHO05D008551 2.7e-54 216.5 268 47.4
HanXRQChr13g0402211 Helianthus annuus HOM05D006609 ORTHO05D008551 8.6e-53 211.5 265 44.2
Nitab4.5_0001737g0100 Nicotiana tabacum HOM05D006609 ORTHO05D008551 4.0e-50 202.6 275 42.5
Prupe.1G447200 Prunus persica HOM05D006609 ORTHO05D008551 1.7e-48 197.2 173 53.8
AUR62009264 Chenopodium quinoa HOM05D006609 ORTHO05D008551 2.7e-46 189.9 161 57.1
Nitab4.5_0001309g0120 Nicotiana tabacum HOM05D006609 ORTHO05D008551 1.3e-45 187.6 354 34.5
DCAR_000757 Daucus carota HOM05D006609 ORTHO05D010582 7.3e-44 181.8 267 40.4
ECA233G1748 Erigeron canadensis HOM05D006609 ORTHO05D008551 1.3e-32 144.4 158 51.9
FAN24G0356 Fragaria x ananassa HOM05D006609 ORTHO05D008551 3.5e-30 136.3 116 56.9
FAN24G3337 Fragaria x ananassa HOM05D006609 ORTHO05D008551 3.5e-30 136.3 116 56.9
unitig_93.g30708 Utricularia gibba HOM05D006609 ORTHO05D008551 3.5e-30 136.3 272 35.7
Lsat_1_v5_gn_5_12101 Lactuca sativa HOM05D006609 ORTHO05D008551 2.3e-29 133.7 136 49.3
vmacro11054 Vaccinium macrocarpon HOM05D006609 ORTHO05D008551 1.4e-26 124.4 135 54.1
SMO144G0045 Selaginella moellendorffii HOM05D006609 ORTHO05D008551 2.5e-20 103.6 154 40.3
SEGI_38144 Sequoiadendron giganteum HOM05D006609 ORTHO05D008551 1.2e-19 101.3 91 54.9
FAN24G1965 Fragaria x ananassa HOM05D006609 ORTHO05D008551 2.0e-17 94.0 88 53.4
EL10Ac2g04002 Beta vulgaris HOM05D006609 ORTHO05D008551 2.6e-17 93.6 231 29.4
PRCOL_00006038 Prasinoderma coloniale HOM05D006609 ORTHO05D008551 5.4e-15 85.9 181 28.7
HanXRQChr16g0519661 Helianthus annuus HOM05D006609 ORTHO05D008551 1.6e-14 84.3 154 37.0
Cre10.g426400 Chlamydomonas reinhardtii HOM05D006609 ORTHO05D008551 3.0e-13 80.1 223 26.9
SEGI_39152 Sequoiadendron giganteum HOM05D006609 ORTHO05D008551 3.3e-12 76.6 104 38.5
QL09p008974 Quercus lobata HOM05D006609 ORTHO05D008551 2.1e-11 73.9 62 51.6
Haze_26101 Corylus avellana HOM05D006609 ORTHO05D008551 3.8e-08 63.2 76 43.4


User provided reference genes

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