Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p25700 Brassica napus HOM05D007410 ORTHO05D009500 2.4e-132 477.2 814 100.0
BraA10t44635Z Brassica rapa HOM05D007410 ORTHO05D009500 8.1e-112 409.1 814 96.3
BolC9t59308H Brassica oleracea HOM05D007410 ORTHO05D009500 1.5e-105 388.3 818 94.6
C09p64770 Brassica napus HOM05D007410 ORTHO05D009500 2.6e-102 377.5 814 94.5
Sp6g31520 Schrenkiella parvula HOM05D007410 ORTHO05D009500 2.8e-96 357.5 822 91.0
BcaNung06328 Brassica carinata HOM05D007410 ORTHO05D009500 4.3e-89 333.6 218 84.4
Carub.0006s1061 Capsella rubella HOM05D007410 ORTHO05D009500 5.1e-82 310.1 819 88.5
AT5G12100 Arabidopsis thaliana HOM05D007410 ORTHO05D009500 3.3e-81 307.4 817 83.7
CARHR201020 Cardamine hirsuta HOM05D007410 ORTHO05D009500 9.4e-68 262.7 194 73.7
Aa31LG3G15130 Aethionema arabicum HOM05D007410 ORTHO05D009500 1.4e-66 258.8 207 67.6
Thhalv10015810m.g Eutrema salsugineum HOM05D007410 ORTHO05D009500 1.3e-40 172.6 97 87.6
AL6G44470 Arabidopsis lyrata HOM05D007410 ORTHO05D009500 2.2e-32 145.2 87 81.6
TWI60G0552 Tripterygium wilfordii HOM05D007410 ORTHO05D009500 1.7e-29 135.6 150 50.7
MD14G1014400 Malus domestica HOM05D007410 ORTHO05D009500 8.3e-24 116.7 155 43.9
RcHm_v2.0_Chr3g0471971 Rosa chinensis HOM05D007410 ORTHO05D009500 9.2e-23 113.2 155 41.3
Eucgr.A01557 Eucalyptus grandis HOM05D007410 ORTHO05D009500 2.1e-22 112.1 149 41.6
MD12G1016300 Malus domestica HOM05D007410 ORTHO05D009500 4.6e-22 110.9 191 39.3
Prupe.7G119000 Prunus persica HOM05D007410 ORTHO05D009500 6.0e-22 110.5 155 42.6
Nitab4.5_0001290g0100 Nicotiana tabacum HOM05D007410 ORTHO05D009500 1.7e-21 109.0 154 39.6
Nitab4.5_0026813g0010 Nicotiana tabacum HOM05D007410 ORTHO05D009500 1.1e-20 106.3 188 36.2
Nitab4.5_0005621g0120 Nicotiana tabacum HOM05D007410 ORTHO05D009500 2.5e-20 105.1 154 39.6
FAN02G1401 Fragaria x ananassa HOM05D007410 ORTHO05D009500 5.6e-20 104.0 155 40.0
Sed0018174 Sechium edule HOM05D007410 ORTHO05D009500 5.6e-20 104.0 151 39.7
Dinv34010 Davidia involucrata HOM05D007410 ORTHO05D009500 7.3e-20 103.6 168 41.1
Cfa016527 Carpinus fangiana HOM05D007410 ORTHO05D009500 9.5e-20 103.2 211 34.1
PGSC0003DMG400004719 Solanum tuberosum HOM05D007410 ORTHO05D009500 2.8e-19 101.7 154 37.7
ClCG05G007520 Citrullus lanatus HOM05D007410 ORTHO05D009500 3.6e-19 101.3 145 38.6
FAN09G1720 Fragaria x ananassa HOM05D007410 ORTHO05D009500 3.6e-19 101.3 155 40.0
Oeu023854.1 Olea europaea HOM05D007410 ORTHO05D009500 4.7e-19 100.9 205 35.1
Sopen12g034470 Solanum pennellii HOM05D007410 ORTHO05D009500 4.7e-19 100.9 173 34.7
Haze_19526 Corylus avellana HOM05D007410 ORTHO05D009500 6.2e-19 100.5 197 35.0
MELO3C006839.2 Cucumis melo HOM05D007410 ORTHO05D009500 6.2e-19 100.5 147 39.5
CsaV3_3G016400 Cucumis sativus L. HOM05D007410 ORTHO05D009500 6.2e-19 100.5 148 39.9
Solyc12g099840.1 Solanum lycopersicum HOM05D007410 ORTHO05D009500 1.1e-18 99.8 173 34.7
QL02p025248 Quercus lobata HOM05D007410 ORTHO05D009500 1.8e-18 99.0 190 37.4
Peaxi162Scf00802g00013 Petunia axillaris HOM05D007410 ORTHO05D009500 1.5e-17 95.9 152 36.2
FvH4_6g17750 Fragaria vesca HOM05D007410 ORTHO05D009500 2.0e-17 95.5 209 32.5
Dinv39608 Davidia involucrata HOM05D007410 ORTHO05D009500 2.6e-17 95.1 177 56.5
FAN14G2442 Fragaria x ananassa HOM05D007410 ORTHO05D009500 4.4e-17 94.4 209 32.1
Aqoxy1G00955 Aquilegia oxysepala HOM05D007410 ORTHO05D009500 5.8e-17 94.0 208 31.2
FAN05G1927 Fragaria x ananassa HOM05D007410 ORTHO05D009500 7.6e-17 93.6 155 37.4
Potri.010G249800 Populus trichocarpa HOM05D007410 ORTHO05D009500 1.7e-16 92.4 178 35.4
DCAR_020784 Daucus carota HOM05D007410 ORTHO05D009500 8.4e-16 90.1 149 35.6
Atru.BG.129.p Acer truncatum HOM05D007410 ORTHO05D009500 3.2e-15 88.2 130 40.0
CSS0026121 Camellia sinensis var. sinensis HOM05D007410 ORTHO05D009500 4.2e-15 87.8 154 44.2
CAN.G575.91 Capsicum annuum HOM05D007410 ORTHO05D009500 7.1e-15 87.0 180 56.7
Hma1.2p1_0084F.1_g043130 Hydrangea macrophylla HOM05D007410 ORTHO05D009500 6.0e-14 84.0 123 39.8
SGA_v2.0_scaffold75G24801 Striga asiatica HOM05D007410 ORTHO05D009500 6.0e-14 84.0 176 31.2
Rhsim03G0082200 Rhododendron simsii HOM05D007410 ORTHO05D009500 7.8e-14 83.6 159 35.8
HanXRQChr17g0534281 Helianthus annuus HOM05D007410 ORTHO05D009500 1.3e-13 82.8 188 31.9
Oeu058028.1 Olea europaea HOM05D007410 ORTHO05D009500 2.3e-13 82.0 138 37.0
VMungo1383G0444 Vigna mungo HOM05D007410 ORTHO05D009500 5.1e-13 80.9 150 38.0
Phvul.001G185900 Phaseolus vulgaris HOM05D007410 ORTHO05D009500 8.7e-13 80.1 148 37.8
HanXRQChr17g0535541 Helianthus annuus HOM05D007410 ORTHO05D009500 1.1e-12 79.7 188 30.9
PGR004G1775 Punica granatum HOM05D007410 ORTHO05D009500 1.5e-12 79.3 111 44.1
TAR365G0607 Trochodendron aralioides HOM05D007410 ORTHO05D009500 1.5e-12 79.3 178 33.1
Migut.J00989 Erythranthe guttata HOM05D007410 ORTHO05D009500 4.3e-12 77.8 143 36.4
Atru.chr12.1030 Acer truncatum HOM05D007410 ORTHO05D009500 7.3e-12 77.0 145 37.9
Sabra10G0194300 Salix brachista HOM05D001909 ORTHO05D007079 9.6e-12 76.6 173 54.9
Lalb_Chr01g0018371 Lupinus albus HOM05D007410 ORTHO05D009500 1.2e-11 76.3 150 36.0
DCAR_013956 Daucus carota HOM05D007410 ORTHO05D009500 6.2e-11 73.9 204 29.9
Atru.chr12.1036 Acer truncatum HOM05D007410 ORTHO05D009500 4.0e-10 71.2 93 38.7
EL10Ac1g00861 Beta vulgaris HOM05D007410 ORTHO05D009500 4.0e-10 71.2 186 33.3
CiPaw.09G007900 Carya illinoinensis HOM05D007410 ORTHO05D009500 4.0e-10 71.2 129 34.9
Duzib093G0520 Durio zibethinus HOM05D007410 ORTHO05D009500 4.0e-10 71.2 88 47.7
Gohir.A01G210000 Gossypium hirsutum HOM05D007410 ORTHO05D009500 4.0e-10 71.2 101 44.6
Ciclev10033972m.g Citrus clementina HOM05D007410 ORTHO05D009500 5.3e-10 70.9 126 37.3
Gohir.D01G198900 Gossypium hirsutum HOM05D007410 ORTHO05D009500 9.0e-10 70.1 101 43.6
Gorai.002G243300 Gossypium raimondii HOM05D007410 ORTHO05D009500 9.0e-10 70.1 101 43.6
FAN09G0790 Fragaria x ananassa HOM05D007410 ORTHO05D009500 1.2e-09 69.7 175 50.3
Cc06_g05130 Coffea canephora HOM05D007410 ORTHO05D009500 1.5e-09 69.3 163 33.7
SGA_v2.0_scaffold40G15416 Striga asiatica HOM05D007410 ORTHO05D009500 7.6e-09 67.0 183 31.1
Glyma.03G190300 Glycine max HOM05D007410 ORTHO05D009500 1.3e-08 66.2 132 36.4
Sc18g0006010 Simmondsia chinensis HOM05D007410 ORTHO05D009500 2.2e-08 65.5 123 31.7
CANSAT80G0494 Cannabis sativa HOM05D007410 ORTHO05D009500 2.9e-08 65.1 104 33.7
Lj1g0017625 Lotus japonicus HOM05D007410 ORTHO05D009500 4.9e-08 64.3 163 54.0
Glyma.19G190733 Glycine max HOM05D007410 ORTHO05D009500 6.4e-08 63.9 165 51.5
AUR62004183 Chenopodium quinoa HOM05D007410 ORTHO05D009500 5.4e-07 60.8 150 32.7
Cpa.g.sc117.70 Carica papaya HOM05D007410 ORTHO05D009500 1.2e-06 59.7 176 52.3
Ca_08961_v3 Cicer arietinum L. HOM05D007410 ORTHO05D009500 2.1e-06 58.9 157 54.8
Lj9E304T4 Lonicera japonica HOM05D007410 ORTHO05D009500 2.1e-06 58.9 116 31.0
Thecc.05G080100 Theobroma cacao HOM05D007410 ORTHO05D009500 7.8e-06 57.0 61 45.9


User provided reference genes

Program Settings