Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p25590 Brassica napus HOM05D003773 ORTHO05D004377 1.3e-82 309.7 152 100.0
BraA10t44626Z Brassica rapa HOM05D003773 ORTHO05D004377 1.9e-70 269.2 132 99.2
Haze_12989 Corylus avellana HOM05D003773 ORTHO05D004377 7.7e-56 220.7 145 75.2
Nitab4.5_0007004g0040 Nicotiana tabacum HOM05D003773 ORTHO05D004377 1.4e-52 209.9 139 69.8
C03p06330 Brassica napus HOM05D003773 ORTHO05D004377 8.2e-50 200.7 144 72.9
BolC3t13141H Brassica oleracea HOM05D003773 ORTHO05D004377 8.2e-50 200.7 144 72.9
vmacro23351 Vaccinium macrocarpon HOM05D003773 ORTHO05D004377 1.2e-48 196.8 148 64.9
BolC9t59300H Brassica oleracea HOM05D003773 ORTHO05D004377 2.0e-48 196.1 101 94.1
vmacro03401 Vaccinium macrocarpon HOM05D003773 ORTHO05D004377 3.4e-48 195.3 148 64.2
BcaB01g05423 Brassica carinata HOM05D003773 ORTHO05D004377 1.0e-47 193.7 132 76.5
C09p64680 Brassica napus HOM05D003773 ORTHO05D004377 3.8e-47 191.8 101 94.1
Lj3C848T13 Lonicera japonica HOM05D003773 ORTHO05D004377 5.0e-47 191.4 132 68.2
BcaNung06880 Brassica carinata HOM05D003773 ORTHO05D004377 6.5e-47 191.0 101 92.1
AL6G23000 Arabidopsis lyrata HOM05D003773 ORTHO05D004377 1.8e-44 183.0 94 94.7
BcaB01g05426 Brassica carinata HOM05D003773 ORTHO05D004377 1.8e-44 183.0 99 89.9
Thhalv10014116m.g Eutrema salsugineum HOM05D003773 ORTHO05D004377 1.8e-44 183.0 101 88.1
Sabra13G0011200 Salix brachista HOM05D003773 ORTHO05D004377 3.9e-44 181.8 198 49.0
COL.COLO4_03532 Corchorus olitorius HOM05D003773 ORTHO05D004377 5.2e-44 181.4 137 64.2
QL08p034440 Quercus lobata HOM05D003773 ORTHO05D004377 6.7e-44 181.0 131 66.4
Zm00001eb035310 Zea mays HOM05D003773 ORTHO05D004377 6.7e-44 181.0 115 70.4
SHI10290 Sapria himalayana HOM05D003773 ORTHO05D004377 8.8e-44 180.6 138 65.9
Os08g0512300 Oryza sativa ssp. japonica HOM05D003773 ORTHO05D004377 2.0e-43 179.5 115 68.7
CARHR200910 Cardamine hirsuta HOM05D003773 ORTHO05D004377 4.4e-43 178.3 92 92.4
AT5G12210 Arabidopsis thaliana HOM05D003773 ORTHO05D004377 7.4e-43 177.6 94 91.5
Aa31LG3G15020 Aethionema arabicum HOM05D003773 ORTHO05D004377 1.3e-42 176.8 98 85.7
BcaB01g05420 Brassica carinata HOM05D003773 ORTHO05D004377 2.8e-42 175.6 126 72.2
Sp6g31430 Schrenkiella parvula HOM05D003773 ORTHO05D004377 2.8e-42 175.6 99 87.9
Carub.0006s1071 Capsella rubella HOM05D003773 ORTHO05D004377 6.3e-42 174.5 94 89.4
ClCG09G002660 Citrullus lanatus HOM05D003773 ORTHO05D004377 1.1e-41 173.7 211 45.5
Thhalv10021168m.g Eutrema salsugineum HOM05D003773 ORTHO05D004377 1.4e-41 173.3 92 90.2
FAN09G4222 Fragaria x ananassa HOM05D003773 ORTHO05D004377 2.4e-41 172.6 169 53.8
HPP92_004888 Vanilla planifolia HOM05D003773 ORTHO05D004377 3.1e-41 172.2 116 69.0
DCAR_023465 Daucus carota HOM05D003773 ORTHO05D004377 4.1e-41 171.8 135 63.0
AL3G23680 Arabidopsis lyrata HOM05D003773 ORTHO05D004377 9.1e-41 170.6 115 76.5
Sp3g10300 Schrenkiella parvula HOM05D003773 ORTHO05D004377 9.1e-41 170.6 90 91.1
Hund25164 Selenicereus undatus HOM05D003773 ORTHO05D004377 5.9e-40 167.9 106 74.5
THA.LOC104799137 Tarenaya hassleriana HOM05D003773 ORTHO05D004377 7.7e-40 167.5 114 75.4
Hund05549 Selenicereus undatus HOM05D003773 ORTHO05D004377 1.3e-39 166.8 120 70.0
Prupe.5G225800 Prunus persica HOM05D003773 ORTHO05D004377 2.2e-39 166.0 127 60.6
AUR62017150 Chenopodium quinoa HOM05D003773 ORTHO05D004377 2.9e-39 165.6 106 73.6
COL.COLO4_20947 Corchorus olitorius HOM05D003773 ORTHO05D004377 2.9e-39 165.6 131 63.4
Peaxi162Scf00314g00337 Petunia axillaris HOM05D003773 ORTHO05D004377 2.9e-39 165.6 118 65.3
AUR62035657 Chenopodium quinoa HOM05D003773 ORTHO05D004377 6.5e-39 164.5 105 73.3
Peaxi162Scf00571g00532 Petunia axillaris HOM05D003773 ORTHO05D004377 8.5e-39 164.1 113 69.0
AT3G12070 Arabidopsis thaliana HOM05D003773 ORTHO05D004377 5.5e-38 161.4 91 89.0
Carub.0003s1141 Capsella rubella HOM05D003773 ORTHO05D004377 5.5e-38 161.4 105 78.1
CBR_g17690 Chara braunii HOM05D003773 ORTHO05D004377 3.6e-37 158.7 128 53.9
Glyma.08G111200 Glycine max HOM05D003773 ORTHO05D004377 4.7e-37 158.3 93 79.6
TPR.G11959 Trifolium pratense HOM05D003773 ORTHO05D004377 4.7e-37 158.3 94 77.7
Atru.chr7.1713 Acer truncatum HOM05D003773 ORTHO05D004377 6.1e-37 157.9 131 60.3
Sc07g0000800 Simmondsia chinensis HOM05D003773 ORTHO05D004377 8.0e-37 157.5 94 78.7
Ca_17973_v3 Cicer arietinum L. HOM05D003773 ORTHO05D004377 2.3e-36 156.0 92 78.3
Duzib052G0913 Durio zibethinus HOM05D003773 ORTHO05D004377 3.0e-36 155.6 93 76.3
Lj4g0004931 Lotus japonicus HOM05D003773 ORTHO05D004377 6.7e-36 154.5 93 77.4
Lj4g0017678 Lotus japonicus HOM05D003773 ORTHO05D004377 8.8e-36 154.1 93 77.4
Thecc.10G119200 Theobroma cacao HOM05D003773 ORTHO05D004377 8.8e-36 154.1 93 75.3
QL05p004180 Quercus lobata HOM05D003773 ORTHO05D004377 1.2e-35 153.7 95 73.7
Eucgr.G02268 Eucalyptus grandis HOM05D003773 ORTHO05D004377 1.5e-35 153.3 94 75.5
Aqoxy5G00933 Aquilegia oxysepala HOM05D003773 ORTHO05D004377 2.0e-35 152.9 93 76.3
CSS0007239 Camellia sinensis var. sinensis HOM05D003773 ORTHO05D004377 2.0e-35 152.9 97 72.2
Ciclev10015999m.g Citrus clementina HOM05D003773 ORTHO05D004377 2.0e-35 152.9 95 73.7
ATR0723G050 Amborella trichopoda HOM05D003773 ORTHO05D004377 2.6e-35 152.5 96 72.9
Solyc03g118570.4 Solanum lycopersicum HOM05D003773 ORTHO05D004377 2.6e-35 152.5 96 70.8
Sopen03g037520 Solanum pennellii HOM05D003773 ORTHO05D004377 2.6e-35 152.5 97 70.1
TAR626G0538 Trochodendron aralioides HOM05D003773 ORTHO05D004377 2.6e-35 152.5 93 76.3
arahy.Tifrunner.gnm1.ann1.E2NQKT Arachis hypogaea HOM05D003773 ORTHO05D004377 4.4e-35 151.8 95 72.6
CAN.G843.44 Capsicum annuum HOM05D003773 ORTHO05D004377 4.4e-35 151.8 95 69.5
Lsat_1_v5_gn_6_29461 Lactuca sativa HOM05D003773 ORTHO05D004377 4.4e-35 151.8 108 63.9
PSO017G1854 Papaver somniferum HOM05D003773 ORTHO05D004377 4.4e-35 151.8 92 75.0
PSO339G0310 Papaver somniferum HOM05D003773 ORTHO05D004377 4.4e-35 151.8 92 75.0
MELO3C023397.2 Cucumis melo HOM05D003773 ORTHO05D004377 5.7e-35 151.4 94 73.4
Glyma.05G153500 Glycine max HOM05D003773 ORTHO05D004377 5.7e-35 151.4 92 76.1
Gohir.D02G186100 Gossypium hirsutum HOM05D003773 ORTHO05D004377 5.7e-35 151.4 91 75.8
Gorai.005G208400 Gossypium raimondii HOM05D003773 ORTHO05D004377 5.7e-35 151.4 91 75.8
TWI39G0383 Tripterygium wilfordii HOM05D003773 ORTHO05D004377 5.7e-35 151.4 93 74.2
Psat7g074520 Pisum sativum HOM05D003773 ORTHO05D004377 7.5e-35 151.0 93 76.3
CsaV3_7G032670 Cucumis sativus L. HOM05D003773 ORTHO05D004377 9.7e-35 150.6 93 73.1
Gohir.A03G162800 Gossypium hirsutum HOM05D003773 ORTHO05D004377 9.7e-35 150.6 92 75.0
Migut.A01113 Erythranthe guttata HOM05D003773 ORTHO05D004377 1.3e-34 150.2 94 74.5
Eucgr.G02437 Eucalyptus grandis HOM05D003773 ORTHO05D004377 1.3e-34 150.2 91 75.8
Aqoxy7G03759 Aquilegia oxysepala HOM05D003773 ORTHO05D004377 1.7e-34 149.8 92 76.1
Potri.013G012500 Populus trichocarpa HOM05D003773 ORTHO05D004377 1.7e-34 149.8 94 72.3
Solyc12g040810.2 Solanum lycopersicum HOM05D003773 ORTHO05D004377 1.7e-34 149.8 95 70.5
Sopen12g020600 Solanum pennellii HOM05D003773 ORTHO05D004377 1.7e-34 149.8 95 70.5
Os11g0523500 Oryza sativa ssp. japonica HOM05D003773 ORTHO05D004377 2.2e-34 149.4 108 62.0
VMungo0251G2733 Vigna mungo HOM05D003773 ORTHO05D004377 2.2e-34 149.4 93 74.2
CSS0038312 Camellia sinensis var. sinensis HOM05D003773 ORTHO05D004377 2.8e-34 149.1 96 70.8
Cpa.g.sc50.7 Carica papaya HOM05D003773 ORTHO05D004377 2.8e-34 149.1 91 74.7
Cfa004598 Carpinus fangiana HOM05D003773 ORTHO05D004377 2.8e-34 149.1 94 75.5
Nn7g36520 Nelumbo nucifera HOM05D003773 ORTHO05D004377 2.8e-34 149.1 93 73.1
GSVIVG01019372001 Vitis vinifera HOM05D003773 ORTHO05D004377 2.8e-34 149.1 94 72.3
CDE02G2566 Ceratophyllum demersum HOM05D003773 ORTHO05D004377 4.8e-34 148.3 94 70.2
Dinv09299 Davidia involucrata HOM05D003773 ORTHO05D004377 4.8e-34 148.3 107 67.3
SGA_v2.0_scaffold227G43195 Striga asiatica HOM05D003773 ORTHO05D004377 4.8e-34 148.3 94 72.3
MSTRG.22069 Avicennia marina HOM05D003773 ORTHO05D004377 6.3e-34 147.9 94 72.3
CiPaw.02G104400 Carya illinoinensis HOM05D003773 ORTHO05D004377 6.3e-34 147.9 94 72.3
Medtr1g111160 Medicago truncatula HOM05D003773 ORTHO05D004377 6.3e-34 147.9 91 74.7
Hma1.2p1_1650F.1_g295665 Hydrangea macrophylla HOM05D003773 ORTHO05D004377 1.1e-33 147.1 102 69.6
Lalb_Chr07g0186751 Lupinus albus HOM05D003773 ORTHO05D004377 1.1e-33 147.1 91 72.5
PGR142G1397 Punica granatum HOM05D003773 ORTHO05D004377 1.1e-33 147.1 94 70.2
CDE05G0639 Ceratophyllum demersum HOM05D003773 ORTHO05D004377 1.8e-33 146.4 94 69.1
Eucgr.G01406 Eucalyptus grandis HOM05D003773 ORTHO05D004377 2.4e-33 146.0 94 72.3
EL10Ac9g21128 Beta vulgaris HOM05D003773 ORTHO05D004377 5.3e-33 144.8 93 75.3
MBI02_g12519_MAGBIO Magnolia biondii HOM05D003773 ORTHO05D004377 5.3e-33 144.8 94 71.3
GSVIVG01000415001 Vitis vinifera HOM05D003773 ORTHO05D004377 5.3e-33 144.8 94 71.3
CANSAT11G0557 Cannabis sativa HOM05D003773 ORTHO05D004377 7.0e-33 144.4 91 72.5
Cc04_g06080 Coffea canephora HOM05D003773 ORTHO05D004377 1.6e-32 143.3 92 68.5
Phvul.002G235200 Phaseolus vulgaris HOM05D003773 ORTHO05D004377 1.6e-32 143.3 91 71.4
Prupe.3G223100 Prunus persica HOM05D003773 ORTHO05D004377 1.6e-32 143.3 94 71.3
RhsimUnG0179500 Rhododendron simsii HOM05D003773 ORTHO05D004377 1.6e-32 143.3 96 70.8
RhsimUnG0179700 Rhododendron simsii HOM05D003773 ORTHO05D004377 1.6e-32 143.3 96 70.8
RhsimUnG0210700 Rhododendron simsii HOM05D003773 ORTHO05D004377 1.6e-32 143.3 96 70.8
MSTRG.21385 Avicennia marina HOM05D003773 ORTHO05D004377 2.0e-32 142.9 94 69.1
Hma1.2p1_1872F.1_g306150 Hydrangea macrophylla HOM05D003773 ORTHO05D004377 2.0e-32 142.9 93 72.0
Actinidia31174 Actinidia chinensis HOM05D003773 ORTHO05D004377 3.5e-32 142.1 92 70.7
FAN01G0361 Fragaria x ananassa HOM05D009091 ORTHO05D004377 3.5e-32 142.1 100 65.0
ECA233G0965 Erigeron canadensis HOM05D003773 ORTHO05D004377 5.9e-32 141.4 99 64.6
ClCG02G001540 Citrullus lanatus HOM05D003773 ORTHO05D004377 7.7e-32 141.0 92 68.5
Eucgr.K00882 Eucalyptus grandis HOM05D003773 ORTHO05D004377 1.0e-31 140.6 93 68.8
FvH4_6g43850 Fragaria vesca HOM05D003773 ORTHO05D004377 1.0e-31 140.6 96 67.7
MBI02_g15890_MAGBIO Magnolia biondii HOM05D003773 ORTHO05D004377 1.0e-31 140.6 142 54.2
MD14G1230700 Malus domestica HOM05D003773 ORTHO05D004377 1.0e-31 140.6 111 63.1
Manes.04G060700 Manihot esculenta HOM05D003773 ORTHO05D004377 1.0e-31 140.6 94 69.1
TAR624G0440 Trochodendron aralioides HOM05D003773 ORTHO05D004377 1.3e-31 140.2 93 72.0
MD06G1221400 Malus domestica HOM05D003773 ORTHO05D004377 3.8e-31 138.7 95 70.5
Pp3c1_39910 Physcomitrium patens HOM05D003773 ORTHO05D004377 3.8e-31 138.7 99 63.6
RcHm_v2.0_Chr2g0160601 Rosa chinensis HOM05D003773 ORTHO05D004377 6.5e-31 137.9 94 68.1
FAN05G4396 Fragaria x ananassa HOM05D003773 ORTHO05D004377 1.1e-30 137.1 96 65.6
FAN14G4120 Fragaria x ananassa HOM05D003773 ORTHO05D004377 1.9e-30 136.3 96 66.7
AagrBONN_evm.TU.Sc2ySwM_117.1003 Anthoceros agrestis HOM05D003773 ORTHO05D004377 3.2e-30 135.6 108 59.3
FAN03G1906 Fragaria x ananassa HOM05D003773 ORTHO05D004377 3.2e-30 135.6 94 67.0
SGA_v2.0_scaffold220G42596 Striga asiatica HOM05D003773 ORTHO05D004377 4.2e-30 135.2 85 71.8
FvH4_7g02690 Fragaria vesca HOM05D003773 ORTHO05D004377 7.2e-30 134.4 94 67.0
FAN06G3388 Fragaria x ananassa HOM05D003773 ORTHO05D004377 7.2e-30 134.4 94 67.0
Ah.12g059510 Amaranthus hybridus HOM05D003773 ORTHO05D004377 9.4e-30 134.0 132 52.3
Eucgr.G01411 Eucalyptus grandis HOM05D003773 ORTHO05D004377 2.1e-29 132.9 131 52.7
Sed0008204 Sechium edule HOM05D003773 ORTHO05D004377 2.7e-29 132.5 79 73.4
FAN10G4129 Fragaria x ananassa HOM05D003773 ORTHO05D004377 8.0e-29 131.0 94 64.9
Nitab4.5_0002046g0050 Nicotiana tabacum HOM05D003773 ORTHO05D004377 1.4e-28 130.2 87 67.8
Pp3c14_22730 Physcomitrium patens HOM05D003773 ORTHO05D004377 1.4e-28 130.2 94 66.0
SMO340G0057 Selaginella moellendorffii HOM05D003773 ORTHO05D004377 6.8e-28 127.9 99 59.6
SEGI_14663 Sequoiadendron giganteum HOM05D003773 ORTHO05D004377 6.8e-28 127.9 98 63.3
Nitab4.5_0001264g0100 Nicotiana tabacum HOM05D003773 ORTHO05D004377 1.2e-27 127.1 87 66.7
Mapoly0074s0013 Marchantia polymorpha HOM05D003773 ORTHO05D004377 1.3e-26 123.6 91 61.5
Prupe.2G111600 Prunus persica HOM05D003773 ORTHO05D004377 1.3e-26 123.6 109 54.1
MD09G1102700 Malus domestica HOM05D003773 ORTHO05D004377 3.7e-26 122.1 81 69.1
RcHm_v2.0_Chr7g0226631 Rosa chinensis HOM05D003773 ORTHO05D004377 3.7e-26 122.1 80 70.0
Haze_26189 Corylus avellana HOM05D003773 ORTHO05D004377 6.3e-26 121.3 133 39.8
HanXRQChr02g0056321 Helianthus annuus HOM05D003773 ORTHO05D004377 8.3e-26 120.9 77 70.1
Cfa014475 Carpinus fangiana HOM05D003773 ORTHO05D004377 1.1e-25 120.6 67 83.6
MELO3C018787.2 Cucumis melo HOM05D003773 ORTHO05D004377 4.1e-25 118.6 129 48.1
HanXRQChr02g0051831 Helianthus annuus HOM05D003773 ORTHO05D004377 2.7e-24 115.9 68 73.5
RcHm_v2.0_Chr5g0048191 Rosa chinensis HOM05D003773 ORTHO05D004377 1.7e-23 113.2 67 77.6
CSS0029091 Camellia sinensis var. sinensis HOM05D003773 ORTHO05D004377 1.1e-22 110.5 129 47.3
AUR62041265 Chenopodium quinoa HOM05D003773 ORTHO05D004377 3.2e-22 109.0 130 50.0
unitig_8.g4952 Utricularia gibba HOM05D003773 ORTHO05D004377 4.7e-21 105.1 72 63.9
MCO02G125 Micromonas commoda HOM05D003773 ORTHO05D004377 5.2e-20 101.7 88 53.4
Eucgr.G01407 Eucalyptus grandis HOM05D003773 ORTHO05D004377 6.8e-20 101.3 96 55.2
Nn5g31474 Nelumbo nucifera HOM05D003773 ORTHO05D004377 1.5e-19 100.1 68 69.1
Cfa027002 Carpinus fangiana HOM05D003773 ORTHO05D123979 2.8e-18 95.9 141 37.6
PRCOL_00001116 Prasinoderma coloniale HOM05D003773 ORTHO05D004377 4.9e-18 95.1 97 47.4
Cre01.g053500 Chlamydomonas reinhardtii HOM05D003773 ORTHO05D004377 1.4e-17 93.6 96 45.8
SalBow3G2878 Salvia bowleyana HOM05D006351 ORTHO05D007796 1.8e-17 93.2 59 67.8
Os03g0193700 Oryza sativa ssp. japonica HOM05D003773 ORTHO05D004377 1.0e-15 87.4 99 43.4
DCAR_026891 Daucus carota HOM05D003773 ORTHO05D004377 9.5e-14 80.9 53 67.9
Pp3c2_3550 Physcomitrium patens HOM05D003773 ORTHO05D004377 6.1e-13 78.2 79 49.4
SEGI_16055 Sequoiadendron giganteum HOM05D003773 ORTHO05D004377 1.7e-10 70.1 71 46.5
Lj6C712G2 Lonicera japonica HOM05D003773 ORTHO05D004377 2.2e-10 69.7 42 73.8
Lj6C717T13 Lonicera japonica HOM05D003773 ORTHO05D004377 8.3e-10 67.8 80 45.0
BcaC05g28627 Brassica carinata HOM05D033925 ORTHO05D032173 5.0e-07 58.5 63 44.4


User provided reference genes

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