Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p23880 Brassica napus HOM05D003833 ORTHO05D004209 1.4e-143 513.1 277 100.0
BraA10t44452Z Brassica rapa HOM05D003833 ORTHO05D004209 1.2e-142 510.0 277 99.6
BcaC04g19007 Brassica carinata HOM05D003833 ORTHO05D004209 3.4e-142 508.4 277 98.9
BolC9t59073H Brassica oleracea HOM05D003833 ORTHO05D004209 7.5e-142 507.3 277 98.9
C09p62360 Brassica napus HOM05D003833 ORTHO05D004209 1.7e-141 506.1 277 98.6
BcaB08g36945 Brassica carinata HOM05D003833 ORTHO05D004209 3.7e-141 505.0 277 98.2
Thhalv10014353m.g Eutrema salsugineum HOM05D003833 ORTHO05D004209 1.0e-138 496.9 277 96.0
Sp6g29240 Schrenkiella parvula HOM05D003833 ORTHO05D004209 1.7e-138 496.1 277 96.0
Carub.0006s1298 Capsella rubella HOM05D003833 ORTHO05D004209 3.0e-135 485.3 277 93.1
CARHR198510 Cardamine hirsuta HOM05D003833 ORTHO05D004209 1.2e-134 483.4 277 92.8
AL6G25600 Arabidopsis lyrata HOM05D003833 ORTHO05D004209 4.4e-134 481.5 277 92.8
AT5G14800 Arabidopsis thaliana HOM05D003833 ORTHO05D004209 1.7e-133 479.6 277 92.4
A03p06820 Brassica napus HOM05D003833 ORTHO05D004209 3.8e-130 468.4 277 90.6
BcaB01g05096 Brassica carinata HOM05D003833 ORTHO05D004209 2.5e-129 465.7 277 90.6
C03p07820 Brassica napus HOM05D003833 ORTHO05D004209 2.5e-129 465.7 277 90.6
BolC3t13281H Brassica oleracea HOM05D003833 ORTHO05D004209 2.5e-129 465.7 277 90.6
BraA03t10007Z Brassica rapa HOM05D003833 ORTHO05D004209 3.6e-128 461.8 281 89.3
Aa31LG11G14650 Aethionema arabicum HOM05D003833 ORTHO05D004209 3.5e-123 445.3 319 78.7
THA.LOC104816595 Tarenaya hassleriana HOM05D003833 ORTHO05D004209 7.8e-115 417.5 279 80.3
QL07p007726 Quercus lobata HOM05D003833 ORTHO05D004209 1.1e-113 413.7 276 78.3
Manes.09G008001 Manihot esculenta HOM05D003833 ORTHO05D004209 8.1e-112 407.5 277 76.9
Prupe.7G045500 Prunus persica HOM05D003833 ORTHO05D004209 1.8e-111 406.4 276 76.8
Phvul.001G124300 Phaseolus vulgaris HOM05D003833 ORTHO05D004209 2.3e-111 406.0 274 76.6
CANSAT64G1401 Cannabis sativa HOM05D003833 ORTHO05D004209 4.0e-111 405.2 274 77.7
ClCG04G004210 Citrullus lanatus HOM05D003833 ORTHO05D004209 4.0e-111 405.2 274 76.6
Thecc.05G140900 Theobroma cacao HOM05D003833 ORTHO05D004209 4.0e-111 405.2 277 76.2
Lj1g0026826 Lotus japonicus HOM05D003833 ORTHO05D004209 5.2e-111 404.8 274 77.4
Haze_19732 Corylus avellana HOM05D003833 ORTHO05D004209 2.0e-110 402.9 277 75.8
Gohir.A07G024700 Gossypium hirsutum HOM05D003833 ORTHO05D004209 2.0e-110 402.9 277 75.8
Glyma.19G131500 Glycine max HOM05D003833 ORTHO05D004209 2.6e-110 402.5 274 75.9
TPR.G9312 Trifolium pratense HOM05D003833 ORTHO05D004209 2.6e-110 402.5 274 75.5
VMungo1383G2371 Vigna mungo HOM05D003833 ORTHO05D004209 2.6e-110 402.5 274 75.5
Cpa.g.sc49.96 Carica papaya HOM05D003833 ORTHO05D004209 5.8e-110 401.4 277 76.2
Ciclev10005607m.g Citrus clementina HOM05D003833 ORTHO05D004209 5.8e-110 401.4 274 76.6
Potri.006G042600 Populus trichocarpa HOM05D003833 ORTHO05D004209 5.8e-110 401.4 274 77.0
COL.COLO4_33945 Corchorus olitorius HOM05D003833 ORTHO05D004209 7.5e-110 401.0 277 76.9
CsaV3_4G027860 Cucumis sativus L. HOM05D003833 ORTHO05D004209 7.5e-110 401.0 274 76.6
Sed0017232 Sechium edule HOM05D003833 ORTHO05D004209 7.5e-110 401.0 274 75.9
FvH4_6g25150 Fragaria vesca HOM05D003833 ORTHO05D004209 9.8e-110 400.6 277 75.5
TWI53G1459 Tripterygium wilfordii HOM05D003833 ORTHO05D004209 9.8e-110 400.6 274 75.5
MELO3C019039.2 Cucumis melo HOM05D003833 ORTHO05D004209 1.3e-109 400.2 274 75.9
FAN05G1327 Fragaria x ananassa HOM05D003833 ORTHO05D004209 1.3e-109 400.2 277 75.5
FAN05G4135 Fragaria x ananassa HOM05D003833 ORTHO05D004209 1.3e-109 400.2 277 75.5
MD12G1094200 Malus domestica HOM05D003833 ORTHO05D004209 1.7e-109 399.8 277 75.5
Cfa016709 Carpinus fangiana HOM05D003833 ORTHO05D004209 2.2e-109 399.4 277 74.7
Sed0027268 Sechium edule HOM05D003833 ORTHO05D004209 2.9e-109 399.1 273 75.8
Duzib093G1609 Durio zibethinus HOM05D003833 ORTHO05D004209 3.7e-109 398.7 276 75.4
RcHm_v2.0_Chr1g0334171 Rosa chinensis HOM05D003833 ORTHO05D004209 3.7e-109 398.7 277 75.5
Glyma.03G129100 Glycine max HOM05D003833 ORTHO05D004209 4.9e-109 398.3 274 75.2
PGR142G2709 Punica granatum HOM05D003833 ORTHO05D004209 6.4e-109 397.9 277 75.5
FAN02G2058 Fragaria x ananassa HOM05D003833 ORTHO05D004209 3.2e-108 395.6 277 74.7
Gorai.001G029600 Gossypium raimondii HOM05D003833 ORTHO05D004209 3.2e-108 395.6 277 74.4
PGR042G2932 Punica granatum HOM05D003833 ORTHO05D004209 4.1e-108 395.2 277 75.1
Sabra06G0028900 Salix brachista HOM05D003833 ORTHO05D004209 4.1e-108 395.2 274 75.9
Atru.chr1.1464 Acer truncatum HOM05D003833 ORTHO05D004209 7.1e-108 394.4 277 74.7
Gohir.D07G028300 Gossypium hirsutum HOM05D003833 ORTHO05D004209 7.1e-108 394.4 277 74.0
MD14G1084400 Malus domestica HOM05D003833 ORTHO05D004209 7.1e-108 394.4 277 74.4
Atru.chr1.1452 Acer truncatum HOM05D003833 ORTHO05D004209 1.6e-107 393.3 277 74.7
arahy.Tifrunner.gnm1.ann1.C9KHWR Arachis hypogaea HOM05D003833 ORTHO05D004209 1.6e-107 393.3 274 74.8
Ca_08401_v3 Cicer arietinum L. HOM05D003833 ORTHO05D004209 6.0e-107 391.3 274 74.8
Lalb_Chr14g0365931 Lupinus albus HOM05D003833 ORTHO05D004209 7.8e-107 391.0 274 75.5
CiPaw.09G044700 Carya illinoinensis HOM05D003833 ORTHO05D004209 1.0e-106 390.6 277 74.4
FAN14G1808 Fragaria x ananassa HOM05D003833 ORTHO05D004209 1.7e-106 389.8 288 72.6
Psat3g078000 Pisum sativum HOM05D003833 ORTHO05D004209 3.9e-106 388.7 274 74.5
Aqoxy2G03781 Aquilegia oxysepala HOM05D003833 ORTHO05D004209 6.6e-106 387.9 272 74.6
Medtr7g090160 Medicago truncatula HOM05D003833 ORTHO05D004209 8.6e-106 387.5 274 72.6
BolC3t20513H Brassica oleracea HOM05D003833 ORTHO05D004209 1.5e-105 386.7 255 83.1
DCAR_020545 Daucus carota HOM05D003833 ORTHO05D004209 1.5e-105 386.7 274 74.5
Aqoxy2G00325 Aquilegia oxysepala HOM05D003833 ORTHO05D004209 1.9e-105 386.3 272 73.9
EL10Ac3g07192 Beta vulgaris HOM05D003833 ORTHO05D004209 3.3e-105 385.6 277 72.9
Lj1A1105T22 Lonicera japonica HOM05D003833 ORTHO05D004209 7.3e-105 384.4 274 74.1
CSS0041120 Camellia sinensis var. sinensis HOM05D003833 ORTHO05D004209 9.5e-105 384.0 271 74.5
Lsat_1_v5_gn_4_129320 Lactuca sativa HOM05D003833 ORTHO05D004209 1.2e-104 383.6 273 75.1
Dinv08489 Davidia involucrata HOM05D003833 ORTHO05D004209 2.8e-104 382.5 274 73.7
ECA232G1919 Erigeron canadensis HOM05D003833 ORTHO05D004209 3.6e-104 382.1 273 76.2
MSTRG.15651 Avicennia marina HOM05D003833 ORTHO05D004209 4.7e-104 381.7 274 73.4
PGSC0003DMG400010441 Solanum tuberosum HOM05D003833 ORTHO05D004209 4.7e-104 381.7 270 74.1
Ah.04g151120 Amaranthus hybridus HOM05D003833 ORTHO05D004209 1.1e-103 380.6 278 72.7
AUR62030362 Chenopodium quinoa HOM05D003833 ORTHO05D004209 1.8e-103 379.8 277 72.2
arahy.Tifrunner.gnm1.ann1.LP5CTB Arachis hypogaea HOM05D003833 ORTHO05D004209 2.3e-103 379.4 304 68.1
MSTRG.10798 Avicennia marina HOM05D003833 ORTHO05D004209 3.1e-103 379.0 274 73.4
Lj2A394G34 Lonicera japonica HOM05D003833 ORTHO05D004209 3.1e-103 379.0 273 74.0
Solyc02g068640.3 Solanum lycopersicum HOM05D003833 ORTHO05D004209 3.1e-103 379.0 273 73.6
Sopen02g017810 Solanum pennellii HOM05D003833 ORTHO05D004209 3.1e-103 379.0 273 73.6
HanXRQChr09g0266491 Helianthus annuus HOM05D003833 ORTHO05D004209 8.9e-103 377.5 273 74.0
PSO210G1377 Papaver somniferum HOM05D003833 ORTHO05D004209 8.9e-103 377.5 277 71.1
PSO832G0079 Papaver somniferum HOM05D003833 ORTHO05D004209 2.0e-102 376.3 277 71.1
Actinidia39173 Actinidia chinensis HOM05D003833 ORTHO05D004209 2.6e-102 375.9 270 71.5
Migut.K00123 Erythranthe guttata HOM05D003833 ORTHO05D004209 2.6e-102 375.9 274 72.3
SGA_v2.0_scaffold94G28522 Striga asiatica HOM05D003833 ORTHO05D004209 3.4e-102 375.6 271 73.4
Sc13g0001320 Simmondsia chinensis HOM05D003833 ORTHO05D004209 5.8e-102 374.8 273 73.3
BolC4t23181H Brassica oleracea HOM05D003833 ORTHO05D004209 9.9e-102 374.0 255 82.0
TAR623G1635 Trochodendron aralioides HOM05D003833 ORTHO05D004209 1.7e-101 373.2 273 71.1
C03p82420 Brassica napus HOM05D003833 ORTHO05D004209 2.2e-101 372.9 282 74.8
Peaxi162Scf00149g00116 Petunia axillaris HOM05D003833 ORTHO05D004209 2.2e-101 372.9 284 71.5
C03p82400 Brassica napus HOM05D003833 ORTHO05D004209 3.7e-101 372.1 282 75.2
Dinv34388 Davidia involucrata HOM05D003833 ORTHO05D004209 1.1e-100 370.5 293 68.6
GSVIVG01033588001 Vitis vinifera HOM05D003833 ORTHO05D004209 1.1e-100 370.5 273 71.4
BcaC02g10661 Brassica carinata HOM05D003833 ORTHO05D004209 2.4e-100 369.4 258 81.0
Oeu029492.1 Olea europaea HOM05D003833 ORTHO05D004209 3.2e-100 369.0 281 69.4
BolC4t24169H Brassica oleracea HOM05D003833 ORTHO05D004209 4.1e-100 368.6 259 81.1
Sc13g0001340 Simmondsia chinensis HOM05D003833 ORTHO05D004209 1.2e-99 367.1 273 72.5
BcaC06g33558 Brassica carinata HOM05D003833 ORTHO05D004209 6.0e-99 364.8 282 74.5
PSO782G0909 Papaver somniferum HOM05D003833 ORTHO05D004209 1.0e-98 364.0 275 68.7
BcaC02g11392 Brassica carinata HOM05D003833 ORTHO05D004209 3.0e-98 362.5 282 74.5
Ah.13g077020 Amaranthus hybridus HOM05D003833 ORTHO05D004209 1.5e-97 360.1 291 67.4
Hund24632 Selenicereus undatus HOM05D003833 ORTHO05D004209 1.5e-97 360.1 277 68.2
C04p16080 Brassica napus HOM05D003833 ORTHO05D004209 2.5e-97 359.4 282 74.1
AUR62040845 Chenopodium quinoa HOM05D003833 ORTHO05D004209 3.3e-97 359.0 277 70.4
CDE02G3693 Ceratophyllum demersum HOM05D003833 ORTHO05D004209 3.1e-95 352.4 272 68.8
CDE09G0749 Ceratophyllum demersum HOM05D003833 ORTHO05D004209 8.9e-95 350.9 272 68.0
Nitab4.5_0003379g0050 Nicotiana tabacum HOM05D003833 ORTHO05D004209 3.4e-94 349.0 336 59.8
SHI05043 Sapria himalayana HOM05D003833 ORTHO05D004209 3.4e-94 349.0 269 69.9
MBI13_g29520_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 3.8e-93 345.5 270 67.4
Nn7g36480 Nelumbo nucifera HOM05D003833 ORTHO05D004209 6.4e-93 344.7 273 68.9
Os01g0948400 Oryza sativa ssp. japonica HOM05D003833 ORTHO05D004209 8.4e-93 344.4 271 66.8
HPP92_001015 Vanilla planifolia HOM05D003833 ORTHO05D004209 1.2e-91 340.5 268 66.4
Nitab4.5_0006282g0020 Nicotiana tabacum HOM05D003833 ORTHO05D004209 6.0e-91 338.2 323 60.7
BolC6t37672H Brassica oleracea HOM05D003833 ORTHO05D004209 6.6e-90 334.7 226 82.7
vmacro07822 Vaccinium macrocarpon HOM05D003833 ORTHO05D004209 1.9e-89 333.2 368 53.5
ATR0721G010 Amborella trichopoda HOM05D003833 ORTHO05D004209 9.6e-89 330.9 272 65.4
unitig_26.g8850 Utricularia gibba HOM05D003833 ORTHO05D004209 3.1e-87 325.9 251 68.9
C04p26360 Brassica napus HOM05D003833 ORTHO05D004209 4.4e-86 322.0 256 73.0
C06p25140 Brassica napus HOM05D003833 ORTHO05D004209 1.3e-85 320.5 281 68.7
SEGI_35199 Sequoiadendron giganteum HOM05D003833 ORTHO05D004209 2.2e-85 319.7 266 63.2
Cc06_g18620 Coffea canephora HOM05D003833 ORTHO05D004209 8.4e-85 317.8 257 65.8
Prupe.7G045400 Prunus persica HOM05D003833 ORTHO05D004209 3.5e-83 312.4 271 59.0
MD12G1091800 Malus domestica HOM05D003833 ORTHO05D004209 2.3e-82 309.7 275 58.2
Eucgr.K01625 Eucalyptus grandis HOM05D003833 ORTHO05D004209 2.5e-81 306.2 211 75.4
Zm00001eb141220 Zea mays HOM05D003833 ORTHO05D004209 3.6e-80 302.4 269 60.2
Mapoly0029s0092 Marchantia polymorpha HOM05D003833 ORTHO05D004209 5.8e-78 295.0 267 58.8
SMO337G0103 Selaginella moellendorffii HOM05D003833 ORTHO05D004209 6.4e-77 291.6 264 58.3
Rhsim03G0034800 Rhododendron simsii HOM05D003833 ORTHO05D004209 1.2e-75 287.3 486 41.4
RhsimUnG0217200 Rhododendron simsii HOM05D003833 ORTHO05D004209 2.1e-75 286.6 486 41.4
AagrBONN_evm.TU.Sc2ySwM_368.156 Anthoceros agrestis HOM05D003833 ORTHO05D004209 3.5e-75 285.8 264 56.4
Pp3c10_15650 Physcomitrium patens HOM05D003833 ORTHO05D004209 1.0e-74 284.3 267 57.3
AagrBONN_evm.TU.Sc2ySwM_368.1806 Anthoceros agrestis HOM05D003833 ORTHO05D004209 6.7e-74 281.6 264 56.1
BcaC02g10122 Brassica carinata HOM05D003833 ORTHO05D004209 9.6e-73 277.7 252 65.1
CBR_g16006 Chara braunii HOM05D003833 ORTHO05D004209 3.1e-71 272.7 279 53.4
BcaC08g44899 Brassica carinata HOM05D003833 ORTHO05D004209 6.9e-71 271.6 267 62.5
Cre03.g154550 Chlamydomonas reinhardtii HOM05D003833 ORTHO05D004209 1.4e-68 263.8 276 52.5
Duzib056G0002 Durio zibethinus HOM05D003833 ORTHO05D004209 1.0e-66 257.7 258 58.9
Dinv03868 Davidia involucrata HOM05D003833 ORTHO05D004209 7.4e-65 251.5 205 68.8
FAN10G2875 Fragaria x ananassa HOM05D005759 ORTHO05D007172 4.5e-62 242.3 300 52.3
MCO05G631 Micromonas commoda HOM05D003833 ORTHO05D004209 1.4e-60 237.3 267 52.1
BolC3t20511H Brassica oleracea HOM05D003833 ORTHO05D004209 5.5e-60 235.3 131 95.4
RcHm_v2.0_Chr2g0125021 Rosa chinensis HOM05D003833 ORTHO05D004209 4.1e-55 219.2 140 79.3
Rhsim13G0081800 Rhododendron simsii HOM05D003833 ORTHO05D004209 6.7e-50 201.8 272 47.1
Eucgr.K01616 Eucalyptus grandis HOM05D003833 ORTHO05D004209 7.9e-43 178.3 136 71.3
SEGI_40635 Sequoiadendron giganteum HOM05D003833 ORTHO05D004209 1.4e-42 177.6 131 72.5
MCO04G012 Micromonas commoda HOM05D003833 ORTHO05D004209 5.2e-42 175.6 415 34.9
MD12G1094100 Malus domestica HOM05D003833 ORTHO05D004209 1.3e-40 171.0 138 63.0
MBI03_g45406_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 2.8e-40 169.9 148 63.5
FAN06G3481 Fragaria x ananassa HOM05D003833 ORTHO05D004209 9.1e-39 164.9 164 60.4
PRCOL_00005946 Prasinoderma coloniale HOM05D003833 ORTHO05D004209 6.5e-37 158.7 216 46.3
TAR623G0480 Trochodendron aralioides HOM05D003833 ORTHO05D004209 9.4e-36 154.8 96 82.3
MBI09_g02151_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 2.7e-35 153.3 120 70.8
MBI03_g17131_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 4.7e-35 152.5 130 64.6
BolC4t24812H Brassica oleracea HOM05D003833 ORTHO05D004209 2.5e-28 130.2 95 74.7
Haze_26946 Corylus avellana HOM05D003833 ORTHO05D004209 1.8e-26 124.0 257 33.5
Nn1g08168 Nelumbo nucifera HOM05D003833 ORTHO05D004209 2.3e-26 123.6 143 49.7
Medtr1046s0010 Medicago truncatula HOM05D003833 ORTHO05D004209 4.4e-25 119.4 265 32.5
BcaNung06051 Brassica carinata HOM05D003833 ORTHO05D004209 7.5e-25 118.6 111 64.0
Haze_27356 Corylus avellana HOM05D003833 ORTHO05D004209 1.4e-23 114.4 293 29.4
RcHm_v2.0_Chr2g0125031 Rosa chinensis HOM05D003833 ORTHO05D004209 4.1e-23 112.8 139 47.5
FvH4_7g06311 Fragaria vesca HOM05D003833 ORTHO05D004209 2.9e-21 106.7 73 79.5
Aqoxy3G03819 Aquilegia oxysepala HOM05D003833 ORTHO05D004209 2.8e-19 100.1 150 44.7
BcaC02g08088 Brassica carinata HOM05D003833 ORTHO05D004209 1.4e-18 97.8 52 98.1
C04p17110 Brassica napus HOM05D003833 ORTHO05D004209 1.8e-18 97.4 52 96.2
BolC4t23262H Brassica oleracea HOM05D003833 ORTHO05D004209 1.8e-18 97.4 52 96.2
BolC8t47752H Brassica oleracea HOM05D003833 ORTHO05D004209 4.0e-18 96.3 52 96.2
BcaC02g11310 Brassica carinata HOM05D003833 ORTHO05D004209 2.0e-17 94.0 52 94.2
C08p09060 Brassica napus HOM05D003833 ORTHO05D004209 7.5e-17 92.0 50 94.0
Gohir.D06G163101 Gossypium hirsutum HOM05D002585 ORTHO05D002917 7.5e-17 92.0 72 61.1
Gorai.011G171800 Gossypium raimondii HOM05D002585 ORTHO05D002917 7.5e-17 92.0 72 61.1
CBR_g37250 Chara braunii HOM05D003833 ORTHO05D004209 1.7e-16 90.9 69 66.7
MD12G1091600 Malus domestica HOM05D003833 ORTHO05D004209 4.9e-16 89.4 68 64.7
Gohir.D13G165733 Gossypium hirsutum HOM05D002585 ORTHO05D002917 8.3e-16 88.6 72 58.3
Gorai.008G052500 Gossypium raimondii HOM05D002585 ORTHO05D002917 1.1e-15 88.2 72 59.7
Oeu050503.1 Olea europaea HOM05D003833 ORTHO05D004209 1.1e-15 88.2 71 64.8
MBI10_g20272_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 2.4e-15 87.0 59 76.3
FvH4_7g06312 Fragaria vesca HOM05D003833 ORTHO05D004209 3.5e-14 83.2 53 77.4
SGA_v2.0_scaffold44G16671 Striga asiatica HOM05D003833 ORTHO05D004209 9.8e-09 65.1 64 56.2
SalBow6G3161 Salvia bowleyana HOM05D021775 ORTHO05D004209 1.4e-07 61.2 40 77.5
Gohir.D03G082900 Gossypium hirsutum HOM05D002585 ORTHO05D002917 3.2e-07 60.1 52 55.8


User provided reference genes

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