Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p20470 Brassica napus HOM05D004989 ORTHO05D039594 4.4e-42 174.1 81 100.0
BcaC04g18592 Brassica carinata HOM05D004989 ORTHO05D039594 5.2e-19 97.4 53 90.6
AL6G30570 Arabidopsis lyrata HOM05D004989 ORTHO05D006335 3.7e-09 64.7 42 78.6
Carub.0006s1748 Capsella rubella HOM05D004989 ORTHO05D006335 4.9e-09 64.3 42 78.6
Sp6g25210 Schrenkiella parvula HOM05D004989 ORTHO05D006335 4.9e-09 64.3 42 78.6
AT5G19150 Arabidopsis thaliana HOM05D004989 ORTHO05D006335 1.9e-08 62.4 42 76.2
Aa31LG11G10490 Aethionema arabicum HOM05D004989 ORTHO05D006335 2.4e-08 62.0 41 78.0
BcaB01g04874 Brassica carinata HOM05D004989 ORTHO05D006335 2.4e-08 62.0 42 73.8
Thhalv10013830m.g Eutrema salsugineum HOM05D004989 ORTHO05D006335 2.4e-08 62.0 42 76.2
BraA02t05485Z Brassica rapa HOM05D004989 ORTHO05D006335 4.1e-08 61.2 41 75.6
BcaC03g13646 Brassica carinata HOM05D004989 ORTHO05D006335 7.1e-08 60.5 41 73.2
C02p10390 Brassica napus HOM05D004989 ORTHO05D006335 7.1e-08 60.5 41 73.2
BolC2t06940H Brassica oleracea HOM05D004989 ORTHO05D006335 7.1e-08 60.5 41 73.2
A02p05270 Brassica napus HOM05D004989 ORTHO05D006335 9.2e-08 60.1 42 71.4
CARHR193800 Cardamine hirsuta HOM05D004989 ORTHO05D006335 1.6e-07 59.3 42 71.4
C03p10860 Brassica napus HOM05D004989 ORTHO05D006335 2.1e-07 58.9 42 71.4
C03p10950 Brassica napus HOM05D004989 ORTHO05D006335 2.1e-07 58.9 42 73.8
BcaB01g05136 Brassica carinata HOM05D004989 ORTHO05D006335 2.7e-07 58.5 42 71.4
A03p09380 Brassica napus HOM05D004989 ORTHO05D006335 2.7e-07 58.5 42 71.4
C03p10910 Brassica napus HOM05D004989 ORTHO05D006335 2.7e-07 58.5 42 71.4
C03p10960 Brassica napus HOM05D004989 ORTHO05D006335 2.7e-07 58.5 42 71.4
BolC3t13560H Brassica oleracea HOM05D004989 ORTHO05D006335 2.7e-07 58.5 42 71.4
BraA03t10257Z Brassica rapa HOM05D004989 ORTHO05D006335 2.7e-07 58.5 42 71.4
Ciclev10005119m.g Citrus clementina HOM05D004989 ORTHO05D006335 4.6e-07 57.8 49 61.2
Hund03167 Selenicereus undatus HOM05D004989 ORTHO05D006335 4.6e-07 57.8 70 47.1
BcaB01g05294 Brassica carinata HOM05D004989 ORTHO05D006335 6.0e-07 57.4 42 69.0
THA.LOC104818802 Tarenaya hassleriana HOM05D004989 ORTHO05D006335 6.0e-07 57.4 42 69.0
BcaB05g23373 Brassica carinata HOM05D004989 ORTHO05D006335 1.7e-06 55.8 42 69.0
CiPaw.02G093300 Carya illinoinensis HOM05D004989 ORTHO05D006335 1.7e-06 55.8 42 64.3
Sc13g0004100 Simmondsia chinensis HOM05D004989 ORTHO05D006335 1.7e-06 55.8 42 66.7
TWI73G0966 Tripterygium wilfordii HOM05D004989 ORTHO05D006335 1.7e-06 55.8 42 64.3
GSVIVG01017902001 Vitis vinifera HOM05D004989 ORTHO05D006335 2.3e-06 55.5 42 66.7
Atru.chr4.2544 Acer truncatum HOM05D004989 ORTHO05D006335 3.0e-06 55.1 49 57.1
Haze_00947 Corylus avellana HOM05D004989 ORTHO05D006335 3.0e-06 55.1 42 64.3
vmacro15315 Vaccinium macrocarpon HOM05D004989 ORTHO05D006335 3.0e-06 55.1 42 59.5
CSS0017868 Camellia sinensis var. sinensis HOM05D004989 ORTHO05D006335 3.9e-06 54.7 42 61.9
HanXRQChr12g0359311 Helianthus annuus HOM05D004989 ORTHO05D006335 5.1e-06 54.3 41 65.9
Dinv38405 Davidia involucrata HOM05D004989 ORTHO05D006335 6.6e-06 53.9 41 63.4
Thecc.04G224100 Theobroma cacao HOM05D004989 ORTHO05D006335 6.6e-06 53.9 60 46.7
Actinidia36991 Actinidia chinensis HOM05D004989 ORTHO05D006335 8.6e-06 53.5 42 61.9
MBI14_g28267_MAGBIO Magnolia biondii HOM05D004989 ORTHO05D006335 8.6e-06 53.5 42 61.9
MD16G1186000 Malus domestica HOM05D004989 ORTHO05D006335 8.6e-06 53.5 42 61.9


User provided reference genes

Program Settings