Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p19460 Brassica napus HOM05D004483 ORTHO05D101033 3.0e-31 137.9 70 100.0
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 2.5e-09 65.1 84 51.2
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 2.5e-09 65.1 84 51.2
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 3.6e-08 61.2 37 81.1
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 3.6e-08 61.2 37 81.1
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 3.6e-08 61.2 37 81.1
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 3.6e-08 61.2 37 81.1
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 3.6e-08 61.2 37 81.1
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 3.6e-08 61.2 37 81.1
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 3.6e-08 61.2 37 81.1
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 3.6e-08 61.2 37 81.1
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 3.6e-08 61.2 37 81.1
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 3.6e-08 61.2 37 81.1
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 3.6e-08 61.2 37 81.1
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 3.6e-08 61.2 37 81.1
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 1.0e-07 59.7 37 78.4
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 1.8e-07 58.9 37 75.7
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 8.8e-07 56.6 33 84.8
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 1.5e-06 55.8 33 84.8
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 1.5e-06 55.8 33 84.8
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 1.5e-06 55.8 33 84.8
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 1.5e-06 55.8 33 84.8
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 2.0e-06 55.5 33 81.8
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 2.0e-06 55.5 37 70.3
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 2.0e-06 55.5 33 81.8
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 2.0e-06 55.5 37 70.3
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 2.0e-06 55.5 33 81.8
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 2.0e-06 55.5 37 70.3
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 2.6e-06 55.1 33 78.8
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 2.6e-06 55.1 33 81.8
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 3.3e-06 54.7 33 81.8
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.3e-06 54.7 33 81.8
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.3e-06 54.7 33 81.8
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 3.3e-06 54.7 33 81.8
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 3.3e-06 54.7 33 81.8
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 3.3e-06 54.7 33 81.8
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 3.3e-06 54.7 31 83.9
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 3.3e-06 54.7 33 81.8
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 3.3e-06 54.7 33 81.8
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 4.4e-06 54.3 33 78.8
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 4.4e-06 54.3 33 81.8
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 5.7e-06 53.9 33 75.8
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 5.7e-06 53.9 33 81.8
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 5.7e-06 53.9 33 81.8
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 5.7e-06 53.9 33 81.8
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 5.7e-06 53.9 33 81.8
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 7.5e-06 53.5 33 78.8
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 7.5e-06 53.5 33 78.8
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 7.5e-06 53.5 33 81.8
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 7.5e-06 53.5 33 81.8
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 7.5e-06 53.5 33 81.8
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 9.7e-06 53.1 33 78.8
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 9.7e-06 53.1 33 78.8
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 9.7e-06 53.1 37 67.6
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 9.7e-06 53.1 33 75.8


User provided reference genes

Program Settings