Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p14870 Brassica napus HOM05D007223 ORTHO05D008932 5.2e-102 374.4 189 100.0
BraA10t43566Z Brassica rapa HOM05D007223 ORTHO05D008932 4.7e-95 351.3 189 95.8
C09p49290 Brassica napus HOM05D007223 ORTHO05D008932 5.5e-88 327.8 189 91.0
BolC9t57780H Brassica oleracea HOM05D007223 ORTHO05D008932 5.5e-88 327.8 189 91.0
BcaC04g19969 Brassica carinata HOM05D007223 ORTHO05D008932 2.4e-67 259.2 134 98.5
BcaB08g36098 Brassica carinata HOM05D007223 ORTHO05D008932 3.2e-67 258.8 134 97.0
Sp6g19140 Schrenkiella parvula HOM05D007223 ORTHO05D008932 1.1e-56 223.8 134 86.6
BcaC03g14153 Brassica carinata HOM05D007223 ORTHO05D008932 1.5e-56 223.4 134 86.6
C02p14240 Brassica napus HOM05D007223 ORTHO05D008932 1.5e-56 223.4 134 86.6
BolC2t07548H Brassica oleracea HOM05D007223 ORTHO05D008932 1.5e-56 223.4 134 86.6
A02p08480 Brassica napus HOM05D007223 ORTHO05D008932 6.2e-55 218.0 134 83.6
Thhalv10015874m.g Eutrema salsugineum HOM05D007223 ORTHO05D008932 1.1e-54 217.2 134 85.8
BraA02t05920Z Brassica rapa HOM05D007223 ORTHO05D008932 1.8e-54 216.5 134 82.8
BcaB05g22346 Brassica carinata HOM05D007223 ORTHO05D008932 2.1e-50 203.0 138 80.4
AT5G57420 Arabidopsis thaliana HOM05D007223 ORTHO05D008932 3.6e-47 192.2 136 80.9
Carub.0008s1794 Capsella rubella HOM05D007223 ORTHO05D008932 5.2e-46 188.3 137 79.6
AL8G33400 Arabidopsis lyrata HOM05D007223 ORTHO05D008932 2.0e-45 186.4 136 79.4
CARHR271220 Cardamine hirsuta HOM05D007223 ORTHO05D008932 4.9e-44 181.8 136 73.5
Aa31LG3G13310 Aethionema arabicum HOM05D007223 ORTHO05D008932 1.7e-36 156.8 131 63.4
THA.LOC104817792 Tarenaya hassleriana HOM05D007223 ORTHO05D008932 8.4e-36 154.5 168 56.0
THA.LOC104813522 Tarenaya hassleriana HOM05D007223 ORTHO05D008932 2.1e-34 149.8 131 64.9
COL.COLO4_37700 Corchorus olitorius HOM05D007223 ORTHO05D008932 2.7e-34 149.4 116 68.1
Duzib168G2276 Durio zibethinus HOM05D007223 ORTHO05D008932 5.1e-33 145.2 137 63.5
CiPaw.08G036200 Carya illinoinensis HOM05D007223 ORTHO05D008932 1.5e-32 143.7 126 63.5
Haze_22095 Corylus avellana HOM05D007223 ORTHO05D008932 2.5e-32 142.9 136 58.8
MD13G1253600 Malus domestica HOM05D007223 ORTHO05D008932 3.3e-32 142.5 110 71.8
RcHm_v2.0_Chr4g0402441 Rosa chinensis HOM05D007223 ORTHO05D008932 4.3e-32 142.1 129 63.6
FAN17G0481 Fragaria x ananassa HOM05D007223 ORTHO05D008932 9.6e-32 141.0 129 62.8
Cfa013503 Carpinus fangiana HOM05D007223 ORTHO05D008932 1.6e-31 140.2 128 64.1
Prupe.1G085900 Prunus persica HOM05D007223 ORTHO05D008932 2.1e-31 139.8 127 64.6
Dinv41246 Davidia involucrata HOM05D007223 ORTHO05D008932 2.8e-31 139.4 133 58.6
FAN22G1200 Fragaria x ananassa HOM05D007223 ORTHO05D008932 3.6e-31 139.0 129 63.6
FAN07G1685 Fragaria x ananassa HOM05D007223 ORTHO05D008932 4.8e-31 138.7 129 64.3
Oeu004200.1 Olea europaea HOM05D007223 ORTHO05D008932 4.8e-31 138.7 127 63.8
CSS0040203 Camellia sinensis var. sinensis HOM05D007223 ORTHO05D008932 6.2e-31 138.3 108 65.7
QL02p097776 Quercus lobata HOM05D007223 ORTHO05D008932 8.1e-31 137.9 134 64.9
Atru.chr7.623 Acer truncatum HOM05D007223 ORTHO05D008932 1.1e-30 137.5 90 78.9
Ciclev10010470m.g Citrus clementina HOM05D007223 ORTHO05D008932 1.1e-30 137.5 123 65.0
Duzib170G0975 Durio zibethinus HOM05D007223 ORTHO05D008932 1.1e-30 137.5 141 57.4
FvH4_4g08200 Fragaria vesca HOM05D007223 ORTHO05D008932 1.4e-30 137.1 130 61.5
FAN12G3200 Fragaria x ananassa HOM05D007223 ORTHO05D008932 1.4e-30 137.1 130 61.5
Gorai.004G099600 Gossypium raimondii HOM05D007223 ORTHO05D008932 1.4e-30 137.1 116 66.4
Gohir.A08G084300 Gossypium hirsutum HOM05D007223 ORTHO05D008932 1.8e-30 136.7 116 66.4
Manes.14G153900 Manihot esculenta HOM05D007223 ORTHO05D008932 1.8e-30 136.7 130 64.6
Cpa.g.sc233.11 Carica papaya HOM05D007223 ORTHO05D008932 4.0e-30 135.6 135 60.0
Lj4g0003272 Lotus japonicus HOM05D007223 ORTHO05D008932 4.0e-30 135.6 119 63.9
Sabra06G0129600 Salix brachista HOM05D007223 ORTHO05D008932 4.0e-30 135.6 127 58.3
MSTRG.6217 Avicennia marina HOM05D007223 ORTHO05D008932 5.3e-30 135.2 111 66.7
Psat4g012360 Pisum sativum HOM05D007223 ORTHO05D008932 5.3e-30 135.2 86 79.1
Cc06_g13230 Coffea canephora HOM05D007223 ORTHO05D008932 9.0e-30 134.4 129 57.4
Gohir.D08G093900 Gossypium hirsutum HOM05D007223 ORTHO05D008932 9.0e-30 134.4 116 65.5
Potri.018G092300 Populus trichocarpa HOM05D007223 ORTHO05D008932 9.0e-30 134.4 140 56.4
Thecc.09G177700 Theobroma cacao HOM05D007223 ORTHO05D008932 9.0e-30 134.4 107 68.2
MSTRG.19707 Avicennia marina HOM05D007223 ORTHO05D008932 1.2e-29 134.0 125 60.8
Phvul.003G145600 Phaseolus vulgaris HOM05D007223 ORTHO05D008932 1.2e-29 134.0 161 51.6
Oeu042168.1 Olea europaea HOM05D007223 ORTHO05D008932 1.5e-29 133.7 128 60.2
TAR383G1061 Trochodendron aralioides HOM05D007223 ORTHO05D008932 1.5e-29 133.7 88 75.0
Actinidia04146 Actinidia chinensis HOM05D007223 ORTHO05D008932 2.0e-29 133.3 126 60.3
arahy.Tifrunner.gnm1.ann1.LBMC6N Arachis hypogaea HOM05D007223 ORTHO05D008932 2.6e-29 132.9 133 62.4
Rhsim01G0004500 Rhododendron simsii HOM05D007223 ORTHO05D008932 2.6e-29 132.9 98 72.4
Dinv42721 Davidia involucrata HOM05D007223 ORTHO05D008932 4.5e-29 132.1 87 77.0
Dinv43380 Davidia involucrata HOM05D007223 ORTHO05D008932 4.5e-29 132.1 87 77.0
Eucgr.C02329 Eucalyptus grandis HOM05D007223 ORTHO05D008932 4.5e-29 132.1 117 61.5
vmacro13125 Vaccinium macrocarpon HOM05D007223 ORTHO05D008932 4.5e-29 132.1 99 71.7
Lalb_Chr07g0180471 Lupinus albus HOM05D007223 ORTHO05D008932 5.8e-29 131.7 86 77.9
Medtr4g128070 Medicago truncatula HOM05D007223 ORTHO05D008932 7.6e-29 131.3 91 76.9
Potri.006G166900 Populus trichocarpa HOM05D007223 ORTHO05D008932 1.3e-28 130.6 104 64.4
arahy.Tifrunner.gnm1.ann1.1E3WXN Arachis hypogaea HOM05D007223 ORTHO05D008932 1.7e-28 130.2 134 60.4
Nn8g40486 Nelumbo nucifera HOM05D007223 ORTHO05D008932 1.7e-28 130.2 108 65.7
GSVIVG01029215001 Vitis vinifera HOM05D007223 ORTHO05D008932 2.2e-28 129.8 137 59.1
Ca_21226_v3 Cicer arietinum L. HOM05D007223 ORTHO05D008932 6.4e-28 128.3 133 54.9
TPR.G5371 Trifolium pratense HOM05D007223 ORTHO05D008932 6.4e-28 128.3 85 76.5
TAR625G0650 Trochodendron aralioides HOM05D007223 ORTHO05D008932 1.9e-27 126.7 131 53.4
Lalb_Chr13g0300221 Lupinus albus HOM05D007223 ORTHO05D008932 2.4e-27 126.3 88 73.9
Peaxi162Scf00231g00621 Petunia axillaris HOM05D007223 ORTHO05D008932 2.4e-27 126.3 91 69.2
PGR102G0813 Punica granatum HOM05D007223 ORTHO05D008932 2.4e-27 126.3 117 60.7
Hma1.2p1_1025F.1_g249310 Hydrangea macrophylla HOM05D007223 ORTHO05D008932 4.2e-27 125.6 125 57.6
MBI16_g39833_MAGBIO Magnolia biondii HOM05D007223 ORTHO05D008932 7.1e-27 124.8 90 70.0
SalBow6G4081 Salvia bowleyana HOM05D007223 ORTHO05D008932 1.2e-26 124.0 85 74.1
VMungo1215G0104 Vigna mungo HOM05D007223 ORTHO05D008932 1.6e-26 123.6 125 56.8
CANSAT11G1503 Cannabis sativa HOM05D007223 ORTHO05D008932 4.6e-26 122.1 129 55.0
MBI14_g17369_MAGBIO Magnolia biondii HOM05D003252 ORTHO05D003640 1.8e-25 120.2 139 51.8
Os04g0653300 Oryza sativa ssp. japonica HOM05D007223 ORTHO05D008932 3.0e-25 119.4 109 54.1
EL10Ac8g18282 Beta vulgaris HOM05D007223 ORTHO05D008932 6.7e-25 118.2 103 59.2
ClCG11G012160 Citrullus lanatus HOM05D007223 ORTHO05D008932 6.7e-25 118.2 92 63.0
CsaV3_2G008380 Cucumis sativus L. HOM05D007223 ORTHO05D008932 1.1e-24 117.5 84 66.7
DCAR_014699 Daucus carota HOM05D007223 ORTHO05D008932 1.9e-24 116.7 99 65.7
MELO3C004026.2 Cucumis melo HOM05D007223 ORTHO05D008932 2.5e-24 116.3 85 65.9
Sed0023808 Sechium edule HOM05D007223 ORTHO05D008932 2.5e-24 116.3 85 65.9
SGA_v2.0_scaffold69G23253 Striga asiatica HOM05D007223 ORTHO05D008932 3.7e-23 112.5 95 60.0
ATR0580G272 Amborella trichopoda HOM05D007223 ORTHO05D008932 4.8e-23 112.1 136 48.5
PSO782G5105 Papaver somniferum HOM05D007223 ORTHO05D008932 4.8e-23 112.1 100 60.0
Migut.J01482 Erythranthe guttata HOM05D007223 ORTHO05D008932 8.1e-23 111.3 143 51.0
HanXRQChr10g0308641 Helianthus annuus HOM05D007223 ORTHO05D008932 8.1e-23 111.3 107 53.3
Lsat_1_v5_gn_5_85421 Lactuca sativa HOM05D007223 ORTHO05D008932 2.4e-22 109.8 115 52.2
Lj5C590T0 Lonicera japonica HOM05D007223 ORTHO05D008932 6.9e-22 108.2 87 67.8
Lj5C7T1 Lonicera japonica HOM05D007223 ORTHO05D008932 6.9e-22 108.2 89 68.5
AUR62033216 Chenopodium quinoa HOM05D007223 ORTHO05D008932 4.5e-21 105.5 93 59.1
Solyc07g019450.3 Solanum lycopersicum HOM05D007223 ORTHO05D008932 5.8e-21 105.1 91 60.4
PGSC0003DMG400043142 Solanum tuberosum HOM05D007223 ORTHO05D008932 9.9e-21 104.4 80 65.0
ECA234G1236 Erigeron canadensis HOM05D007223 ORTHO05D008932 1.9e-19 100.1 84 60.7
Zm00001eb432400 Zea mays HOM05D007223 ORTHO05D008932 4.2e-19 99.0 103 50.5
SEGI_39293 Sequoiadendron giganteum HOM05D007223 ORTHO05D008932 2.7e-18 96.3 132 47.7
HPP92_017414 Vanilla planifolia HOM05D007223 ORTHO05D008932 3.0e-17 92.8 136 44.1
SEGI_19995 Sequoiadendron giganteum HOM05D007223 ORTHO05D008932 5.8e-13 78.6 87 52.9
Nitab4.5_0001972g0010 Nicotiana tabacum HOM05D007223 ORTHO05D008932 1.7e-12 77.0 61 63.9
Glyma.20G083900 Glycine max HOM05D007223 ORTHO05D008932 1.9e-11 73.6 124 46.0
Mapoly0013s0010 Marchantia polymorpha HOM05D007223 ORTHO05D008932 7.1e-11 71.6 78 43.6
SMO170G0055 Selaginella moellendorffii HOM05D058183 ORTHO05D008932 3.5e-10 69.3 75 50.7
SMO141G0094 Selaginella moellendorffii HOM05D058183 ORTHO05D008932 4.6e-10 68.9 103 43.7
CBR_g19697 Chara braunii HOM05D000117 ORTHO05D008932 7.4e-08 61.6 90 36.7
CBR_g39692 Chara braunii HOM05D000117 ORTHO05D000070 9.7e-08 61.2 83 37.3
AagrBONN_evm.TU.Sc2ySwM_117.1187 Anthoceros agrestis HOM05D007223 ORTHO05D008932 1.6e-07 60.5 77 45.5
Aqoxy7G03081 Aquilegia oxysepala HOM05D007223 ORTHO05D008932 3.7e-07 59.3 46 65.2


User provided reference genes

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