Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p14180 Brassica napus HOM05D007210 ORTHO05D006152 2.9e-114 415.2 211 100.0
C09p48590 Brassica napus HOM05D007210 ORTHO05D006152 1.9e-84 316.2 213 78.9
BraA10t43511Z Brassica rapa HOM05D007210 ORTHO05D006152 4.6e-83 311.6 180 91.7
BcaB08g36043 Brassica carinata HOM05D007210 ORTHO05D006152 2.5e-81 305.8 210 79.0
A10p14200 Brassica napus HOM05D007210 ORTHO05D006152 2.5e-81 305.8 218 76.6
BraA10t43513Z Brassica rapa HOM05D007210 ORTHO05D006152 2.5e-81 305.8 218 76.6
BcaB08g36040 Brassica carinata HOM05D007210 ORTHO05D006152 1.5e-78 296.6 214 78.0
BcaC04g20042 Brassica carinata HOM05D007210 ORTHO05D019922 4.8e-72 275.0 144 90.3
A10p14190 Brassica napus HOM05D007210 ORTHO05D006152 1.2e-70 270.4 214 72.4
BolC9t57696H Brassica oleracea HOM05D007210 ORTHO05D006152 3.8e-61 238.8 126 91.3
BraA10t43512Z Brassica rapa HOM05D007210 ORTHO05D006152 5.4e-60 235.0 220 65.0
BcaB08g36045 Brassica carinata HOM05D007210 ORTHO05D006152 9.3e-52 207.6 152 70.4
BolC3t13970H Brassica oleracea HOM05D007210 ORTHO05D006152 6.0e-51 204.9 218 54.1
BcaC01g06454 Brassica carinata HOM05D007210 ORTHO05D006152 1.0e-50 204.1 217 55.8
C03p15300 Brassica napus HOM05D007210 ORTHO05D006152 1.0e-50 204.1 217 55.8
BcaB01g04427 Brassica carinata HOM05D007210 ORTHO05D006152 2.3e-50 203.0 217 55.3
A03p13080 Brassica napus HOM05D007210 ORTHO05D006152 3.9e-50 202.2 212 55.7
BraA03t10619Z Brassica rapa HOM05D007210 ORTHO05D006152 3.9e-50 202.2 199 55.8
BcaNung05243 Brassica carinata HOM05D007210 ORTHO05D006152 8.2e-48 194.5 217 54.4
Carub.0008s1740 Capsella rubella HOM05D007210 ORTHO05D006152 2.2e-45 186.4 197 51.8
BcaC01g06453 Brassica carinata HOM05D007210 ORTHO05D006152 2.9e-45 186.0 212 52.8
BcaNung05242 Brassica carinata HOM05D007210 ORTHO05D006152 2.9e-45 186.0 212 52.8
BcaB01g04428 Brassica carinata HOM05D007210 ORTHO05D006152 3.8e-45 185.7 183 56.3
BraA03t10618Z Brassica rapa HOM05D007210 ORTHO05D006152 6.5e-45 184.9 199 54.3
BolC3t13971H Brassica oleracea HOM05D007210 ORTHO05D006152 4.6e-43 178.7 212 51.9
C03p15310 Brassica napus HOM05D007210 ORTHO05D006152 1.0e-42 177.6 213 51.2
A03p13090 Brassica napus HOM05D007210 ORTHO05D006152 1.9e-41 173.3 212 50.0
BcaC01g06452 Brassica carinata HOM05D007210 ORTHO05D006152 4.3e-41 172.2 176 56.8
CARHR270660 Cardamine hirsuta HOM05D007210 ORTHO05D006152 2.8e-40 169.5 168 53.6
C09p48560 Brassica napus HOM05D007210 ORTHO05D006152 6.9e-39 164.9 104 79.8
BolC3t13972H Brassica oleracea HOM05D007210 ORTHO05D006152 1.6e-35 153.7 151 55.6
BolC9t57698H Brassica oleracea HOM05D007210 ORTHO05D006152 1.2e-27 127.5 69 89.9
AL8G32780 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.1e-27 126.7 196 41.3
BcaC01g06451 Brassica carinata HOM05D007210 ORTHO05D006152 2.4e-23 113.2 172 41.3
A09p15630 Brassica napus HOM05D007210 ORTHO05D006152 4.2e-20 102.4 189 33.9
AL2G12260 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 7.2e-20 101.7 147 40.8
AL2G12250 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.6e-19 100.5 156 39.1
BraA09t37203Z Brassica rapa HOM05D007210 ORTHO05D006152 1.6e-19 100.5 184 34.2
C03p15280 Brassica napus HOM05D008242 ORTHO05D010974 2.1e-19 100.1 157 39.5
Carub.0002s0168 Capsella rubella HOM05D007210 ORTHO05D006152 1.4e-18 97.4 160 33.8
CARHR208050 Cardamine hirsuta HOM05D008885 ORTHO05D006152 5.2e-18 95.5 139 41.0
AT1G63205 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 1.5e-17 94.0 157 38.2
Carub.0002s0167 Capsella rubella HOM05D007210 ORTHO05D006152 4.4e-17 92.4 167 35.3
AL52U10010 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 7.5e-17 91.7 116 44.0
BcaB07g31387 Brassica carinata HOM05D007210 ORTHO05D006152 1.3e-16 90.9 170 33.5
BcaC05g24442 Brassica carinata HOM05D007210 ORTHO05D006152 3.7e-16 89.4 135 37.8
Carub.0002s0166 Capsella rubella HOM05D007210 ORTHO05D006152 3.7e-16 89.4 156 36.5
AL2G12230 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 4.8e-16 89.0 136 37.5
AL2G12220 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.1e-15 87.8 144 35.4
C05p03140 Brassica napus HOM05D007210 ORTHO05D006152 1.1e-15 87.8 160 35.6
BolC5t29096H Brassica oleracea HOM05D007210 ORTHO05D006152 1.1e-15 87.8 148 38.5
CARHR048290 Cardamine hirsuta HOM05D007210 ORTHO05D006152 1.8e-15 87.0 139 35.3
Carub.0002s0170 Capsella rubella HOM05D007210 ORTHO05D006152 3.1e-15 86.3 131 34.4
AT1G63190 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 4.1e-15 85.9 161 34.8
AT1G63206 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 4.1e-15 85.9 148 34.5
BcaC04g22476 Brassica carinata HOM05D007210 ORTHO05D006152 4.1e-15 85.9 161 35.4
BolC9t54788H Brassica oleracea HOM05D007210 ORTHO05D006152 4.1e-15 85.9 161 35.4
Carub.0004s1936 Capsella rubella HOM05D007210 ORTHO05D006152 4.1e-15 85.9 137 38.7
Thhalv10023855m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 4.1e-15 85.9 147 36.1
AL2G12270 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 5.3e-15 85.5 153 34.6
BcaB07g31384 Brassica carinata HOM05D007210 ORTHO05D006152 5.3e-15 85.5 155 37.4
A10p03420 Brassica napus HOM05D007210 ORTHO05D006152 5.3e-15 85.5 139 36.0
A09p15620 Brassica napus HOM05D007210 ORTHO05D006152 7.0e-15 85.1 163 36.2
BraA09t37202Z Brassica rapa HOM05D007210 ORTHO05D006152 7.0e-15 85.1 163 36.2
AL2G12280 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 9.1e-15 84.7 147 36.7
Carub.0004s1937 Capsella rubella HOM05D007210 ORTHO05D006152 9.1e-15 84.7 137 38.0
AT1G63200 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 1.2e-14 84.3 153 35.3
BraA10t42618Z Brassica rapa HOM05D007210 ORTHO05D006152 2.6e-14 83.2 164 34.8
AL2G12300 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 5.9e-14 82.0 141 36.2
BcaB01g02146 Brassica carinata HOM05D007210 ORTHO05D006152 1.0e-13 81.3 143 35.0
Carub.0002s0174 Capsella rubella HOM05D007210 ORTHO05D006152 1.0e-13 81.3 132 36.4
AL2G12320 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.7e-13 80.5 123 37.4
Sp2g01360 Schrenkiella parvula HOM05D007210 ORTHO05D006152 1.7e-13 80.5 168 32.7
AT5G05040 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 3.8e-13 79.3 116 39.7
A09p13520 Brassica napus HOM05D007210 ORTHO05D006152 3.8e-13 79.3 135 35.6
BraA05t19960Z Brassica rapa HOM05D007210 ORTHO05D006152 5.0e-13 79.0 164 33.5
CARHR284440 Cardamine hirsuta HOM05D007210 ORTHO05D006152 5.0e-13 79.0 154 34.4
Thhalv10023669m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 5.0e-13 79.0 131 37.4
Sp6g37770 Schrenkiella parvula HOM05D008885 ORTHO05D006152 5.0e-13 79.0 111 44.1
BcaC07g41054 Brassica carinata HOM05D007210 ORTHO05D006152 1.1e-12 77.8 145 34.5
AT5G05060 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 1.5e-12 77.4 113 40.7
BraA09t37003Z Brassica rapa HOM05D007210 ORTHO05D006152 1.9e-12 77.0 135 34.1
AT2G37435 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 2.5e-12 76.6 111 36.0
BcaC02g10394 Brassica carinata HOM05D007210 ORTHO05D006152 2.5e-12 76.6 147 34.0
A05p10190 Brassica napus HOM05D007210 ORTHO05D006152 2.5e-12 76.6 171 32.2
C03p93270 Brassica napus HOM05D007210 ORTHO05D006152 2.5e-12 76.6 132 34.8
BolC3t21625H Brassica oleracea HOM05D007210 ORTHO05D006152 2.5e-12 76.6 132 34.8
Carub.0002s0171 Capsella rubella HOM05D007210 ORTHO05D006152 2.5e-12 76.6 170 33.5
AL5G33880 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 3.2e-12 76.3 111 37.8
Carub.0002s0169 Capsella rubella HOM05D007210 ORTHO05D006152 3.2e-12 76.3 178 30.9
A07p12710 Brassica napus HOM05D008885 ORTHO05D006152 5.5e-12 75.5 109 40.4
Sp2g04770 Schrenkiella parvula HOM05D007210 ORTHO05D006152 1.2e-11 74.3 118 39.0
AL4G33850 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.7e-11 73.2 204 28.9
BraA07t29049Z Brassica rapa HOM05D008885 ORTHO05D006152 2.7e-11 73.2 109 39.4
BolC5t30124H Brassica oleracea HOM05D007210 ORTHO05D006152 3.6e-11 72.8 172 30.2
BraA08t32080Z Brassica rapa HOM05D007210 ORTHO05D006152 3.6e-11 72.8 154 31.8
BcaB07g31391 Brassica carinata HOM05D007210 ORTHO05D006152 8.0e-11 71.6 142 36.6
C05p13910 Brassica napus HOM05D007210 ORTHO05D006152 8.0e-11 71.6 154 31.8
Carub.0002s0173 Capsella rubella HOM05D007210 ORTHO05D006152 8.0e-11 71.6 113 38.9
AL6G14830 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 1.4e-10 70.9 110 37.3
Thhalv10015529m.g Eutrema salsugineum HOM05D008885 ORTHO05D006152 3.0e-10 69.7 111 37.8
Thhalv10015607m.g Eutrema salsugineum HOM05D008885 ORTHO05D006152 8.8e-10 68.2 98 38.8
A08p00230 Brassica napus HOM05D007210 ORTHO05D006152 1.2e-09 67.8 142 31.7
BcaB05g21736 Brassica carinata HOM05D008885 ORTHO05D006152 4.4e-09 65.9 109 34.9
AL2G12200 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 5.7e-09 65.5 80 38.8
Carub.0006s0398 Capsella rubella HOM05D008885 ORTHO05D006152 5.7e-09 65.5 110 35.5
AL7G39700 Arabidopsis lyrata HOM05D008242 ORTHO05D012602 9.8e-09 64.7 131 35.9
Carub.0006s0396 Capsella rubella HOM05D008885 ORTHO05D006152 2.8e-08 63.2 132 34.1
BraA02t04831Z Brassica rapa HOM05D008885 ORTHO05D006152 3.7e-08 62.8 109 33.9
BcaC03g13143 Brassica carinata HOM05D008885 ORTHO05D006152 4.8e-08 62.4 139 30.2
C02p02150 Brassica napus HOM05D008885 ORTHO05D006152 4.8e-08 62.4 139 30.2
BolC2t06184H Brassica oleracea HOM05D008885 ORTHO05D006152 4.8e-08 62.4 139 30.2
Thhalv10023805m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 4.8e-08 62.4 96 34.4
BcaC03g13142 Brassica carinata HOM05D008885 ORTHO05D006152 6.3e-08 62.0 109 33.9
BolC2t06182H Brassica oleracea HOM05D008885 ORTHO05D006152 6.3e-08 62.0 109 33.9
BraA02t04833Z Brassica rapa HOM05D008885 ORTHO05D006152 6.3e-08 62.0 139 29.5
CARHR208210 Cardamine hirsuta HOM05D008885 ORTHO05D006152 8.3e-08 61.6 110 34.5
THA.LOC104809659 Tarenaya hassleriana HOM05D007210 ORTHO05D006152 1.8e-07 60.5 96 40.6
BcaB05g21588 Brassica carinata HOM05D008885 ORTHO05D006152 2.4e-07 60.1 139 28.8
BcaC03g13144 Brassica carinata HOM05D008885 ORTHO05D006152 3.1e-07 59.7 110 33.6
C02p02160 Brassica napus HOM05D008885 ORTHO05D006152 3.1e-07 59.7 110 33.6
BolC2t06185H Brassica oleracea HOM05D008885 ORTHO05D006152 3.1e-07 59.7 110 33.6
Carub.0007s2602 Capsella rubella HOM05D008242 ORTHO05D012602 5.4e-07 58.9 128 31.2
BcaB05g21732 Brassica carinata HOM05D008885 ORTHO05D006152 7.0e-07 58.5 139 29.5
BcaB05g21733 Brassica carinata HOM05D008885 ORTHO05D006152 7.0e-07 58.5 139 29.5
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 7.0e-07 58.5 121 38.8
C04p12630 Brassica napus HOM05D007210 ORTHO05D006152 9.1e-07 58.2 167 29.9
BolC4t22912H Brassica oleracea HOM05D007210 ORTHO05D006152 9.1e-07 58.2 167 29.9
AL7G39710 Arabidopsis lyrata HOM05D008242 ORTHO05D012602 1.2e-06 57.8 167 31.7
BraA02t04832Z Brassica rapa HOM05D008885 ORTHO05D006152 2.0e-06 57.0 114 32.5
QL10p030102 Quercus lobata HOM05D019990 ORTHO05D007789 2.7e-06 56.6 135 32.6
AL1G58370 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 3.5e-06 56.2 140 30.7
THA.LOC104809406 Tarenaya hassleriana HOM05D004201 ORTHO05D012052 3.5e-06 56.2 116 35.3
THA.LOC104809407 Tarenaya hassleriana HOM05D004201 ORTHO05D012052 3.5e-06 56.2 116 34.5
TPR.G9036 Trifolium pratense HOM05D042142 ORTHO05D037787 3.5e-06 56.2 99 37.4
BcaC02g11660 Brassica carinata HOM05D007210 ORTHO05D006152 4.5e-06 55.8 169 27.8
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 4.5e-06 55.8 121 37.2
CiPaw.10G106500 Carya illinoinensis HOM05D010787 ORTHO05D011812 5.9e-06 55.5 126 34.9
Thhalv10015718m.g Eutrema salsugineum HOM05D008242 ORTHO05D010974 7.7e-06 55.1 108 31.5


User provided reference genes

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