Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p12040 Brassica napus HOM05D010845 ORTHO05D002692 6.0e-89 330.9 174 100.0
BcaB08g35844 Brassica carinata HOM05D010845 ORTHO05D002692 2.5e-74 282.3 174 88.5
Sp6g16730 Schrenkiella parvula HOM05D010845 ORTHO05D002692 3.3e-71 271.9 174 83.9
BraA10t43305Z Brassica rapa HOM05D010845 ORTHO05D002692 1.3e-67 260.0 137 100.0
BolC9t57396H Brassica oleracea HOM05D010845 ORTHO05D002692 3.9e-64 248.4 143 92.3
AL8G30220 Arabidopsis lyrata HOM05D010845 ORTHO05D002692 2.8e-62 242.3 174 76.4
C09p45220 Brassica napus HOM05D010845 ORTHO05D002692 3.7e-62 241.9 139 93.5
AT5G54790 Arabidopsis thaliana HOM05D010845 ORTHO05D002692 4.5e-60 235.0 174 74.7
CARHR268130 Cardamine hirsuta HOM05D010845 ORTHO05D002692 1.9e-58 229.6 177 75.7
A02p10030 Brassica napus HOM05D010845 ORTHO05D002692 7.2e-58 227.6 174 74.1
Thhalv10015916m.g Eutrema salsugineum HOM05D010845 ORTHO05D002692 1.2e-57 226.9 174 72.4
BcaB05g22158 Brassica carinata HOM05D010845 ORTHO05D002692 6.1e-57 224.6 174 74.1
BraA02t06071Z Brassica rapa HOM05D010845 ORTHO05D002692 1.0e-56 223.8 174 73.0
Carub.0008s1506 Capsella rubella HOM05D010845 ORTHO05D002692 2.2e-54 216.1 176 73.3
BolC2t07773H Brassica oleracea HOM05D010845 ORTHO05D002692 2.8e-54 215.7 176 71.6
BcaC03g14288 Brassica carinata HOM05D010845 ORTHO05D002692 1.2e-52 210.3 173 70.5
C02p16670 Brassica napus HOM05D010845 ORTHO05D002692 4.0e-40 168.7 140 70.7
Aa31LG3G10720 Aethionema arabicum HOM05D010845 ORTHO05D002692 5.2e-16 88.6 173 39.9
Duzib213G0532 Durio zibethinus HOM05D002846 ORTHO05D002692 4.9e-14 82.0 192 37.5
THA.LOC104813418 Tarenaya hassleriana HOM05D010845 ORTHO05D002692 4.1e-13 79.0 188 37.8
TWI38G1873 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 2.0e-12 76.6 192 36.5
Thecc.07G046400 Theobroma cacao HOM05D002846 ORTHO05D002692 1.9e-10 70.1 191 35.6
Gohir.A01G076300 Gossypium hirsutum HOM05D002846 ORTHO05D002692 7.3e-10 68.2 183 34.4
Gohir.D01G063800 Gossypium hirsutum HOM05D002846 ORTHO05D002692 1.2e-09 67.4 182 33.0
Gorai.013G163000 Gossypium raimondii HOM05D002846 ORTHO05D002692 1.6e-09 67.0 164 34.8
TPR.G19979 Trifolium pratense HOM05D002846 ORTHO05D002692 2.1e-09 66.6 175 34.3
Psat5g264560 Pisum sativum HOM05D002846 ORTHO05D002692 2.8e-09 66.2 186 37.1
TWI38G2122 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 2.8e-09 66.2 194 34.5
Gorai.002G084300 Gossypium raimondii HOM05D002846 ORTHO05D002692 4.7e-09 65.5 184 35.9
Gohir.A13G140400 Gossypium hirsutum HOM05D002846 ORTHO05D002692 6.2e-09 65.1 164 34.8
Phvul.005G114400 Phaseolus vulgaris HOM05D002846 ORTHO05D002692 1.4e-08 63.9 176 36.4
TAR627G0783 Trochodendron aralioides HOM05D002846 ORTHO05D002692 1.4e-08 63.9 190 35.8
CsaV3_3G023230 Cucumis sativus L. HOM05D002846 ORTHO05D002692 1.8e-08 63.5 182 31.9
FAN14G0905 Fragaria x ananassa HOM05D002846 ORTHO05D002692 3.1e-08 62.8 183 35.5
Potri.001G419400 Populus trichocarpa HOM05D002846 ORTHO05D002692 4.0e-08 62.4 211 33.6
QL08p033485 Quercus lobata HOM05D002846 ORTHO05D002692 4.0e-08 62.4 182 35.7
VMungo1080G0378 Vigna mungo HOM05D002846 ORTHO05D002692 4.0e-08 62.4 197 35.0
Sabra02G0175700 Salix brachista HOM05D002846 ORTHO05D002692 5.2e-08 62.0 197 37.6
AT1G50930 Arabidopsis thaliana HOM05D010922 ORTHO05D011067 6.8e-08 61.6 202 28.7
Medtr2g083300 Medicago truncatula HOM05D002846 ORTHO05D002692 6.8e-08 61.6 180 37.8
FAN25G2313 Fragaria x ananassa HOM05D002846 ORTHO05D002692 8.9e-08 61.2 193 34.7
Potri.011G135700 Populus trichocarpa HOM05D002846 ORTHO05D002692 8.9e-08 61.2 201 35.8
GSVIVG01001985001 Vitis vinifera HOM05D002846 ORTHO05D002692 8.9e-08 61.2 183 34.4
AUR62037135 Chenopodium quinoa HOM05D002846 ORTHO05D002692 1.2e-07 60.8 165 38.2
ClCG05G014610 Citrullus lanatus HOM05D002846 ORTHO05D002692 1.2e-07 60.8 170 38.2
Cc05_g13390 Coffea canephora HOM05D002846 ORTHO05D002692 1.2e-07 60.8 188 31.4
Hma1.2p1_0948F.1_g240490 Hydrangea macrophylla HOM05D002846 ORTHO05D002692 1.2e-07 60.8 197 34.0
Sp1g37670 Schrenkiella parvula HOM05D010922 ORTHO05D011067 1.2e-07 60.8 200 30.0
TWI36G0639 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 1.2e-07 60.8 195 36.4
Gohir.D13G145200 Gossypium hirsutum HOM05D002846 ORTHO05D002692 1.5e-07 60.5 161 34.8
Psat5g251520 Pisum sativum HOM05D002846 ORTHO05D002692 1.5e-07 60.5 159 30.8
Potri.014G151900 Populus trichocarpa HOM05D002846 ORTHO05D002692 1.5e-07 60.5 191 34.6
FvH4_6g43420 Fragaria vesca HOM05D002846 ORTHO05D002692 2.0e-07 60.1 180 35.0
Actinidia27214 Actinidia chinensis HOM05D002846 ORTHO05D002692 2.6e-07 59.7 182 31.3
Lalb_Chr01g0005591 Lupinus albus HOM05D002846 ORTHO05D002692 2.6e-07 59.7 152 36.2
ATR0697G184 Amborella trichopoda HOM05D002846 ORTHO05D002692 3.4e-07 59.3 164 37.2
AL1G58650 Arabidopsis lyrata HOM05D010922 ORTHO05D011067 3.4e-07 59.3 196 28.6
Cfa020399 Carpinus fangiana HOM05D002846 ORTHO05D002692 3.4e-07 59.3 188 31.9
FAN05G4571 Fragaria x ananassa HOM05D002846 ORTHO05D002692 3.4e-07 59.3 185 34.6
Peaxi162Scf00007g01016 Petunia axillaris HOM05D002846 ORTHO05D002692 3.4e-07 59.3 198 32.8
Sabra14G0115500 Salix brachista HOM05D002846 ORTHO05D002692 3.4e-07 59.3 193 34.7
Glyma.12G194600 Glycine max HOM05D002846 ORTHO05D002692 4.4e-07 58.9 169 36.1
Prupe.4G205800 Prunus persica HOM05D002846 ORTHO05D002692 4.4e-07 58.9 180 31.7
Sabra16G0285000 Salix brachista HOM05D002846 ORTHO05D002692 4.4e-07 58.9 206 32.5
Thecc.02G312900 Theobroma cacao HOM05D002846 ORTHO05D002692 4.4e-07 58.9 189 32.3
TPR.G4201 Trifolium pratense HOM05D002846 ORTHO05D002692 4.4e-07 58.9 188 34.6
GSVIVG01030606001 Vitis vinifera HOM05D002846 ORTHO05D002692 4.4e-07 58.9 180 33.9
Nn1g07065 Nelumbo nucifera HOM05D002846 ORTHO05D002692 5.8e-07 58.5 191 35.6
Aqoxy4G01970 Aquilegia oxysepala HOM05D002846 ORTHO05D002692 7.5e-07 58.2 185 34.1
DCAR_019769 Daucus carota HOM05D002846 ORTHO05D002692 7.5e-07 58.2 163 35.0
Dinv39698 Davidia involucrata HOM05D002846 ORTHO05D002692 1.3e-06 57.4 201 35.3
FAN09G0250 Fragaria x ananassa HOM05D002846 ORTHO05D002692 1.3e-06 57.4 182 34.1
BcaC05g27377 Brassica carinata HOM05D010922 ORTHO05D011067 1.7e-06 57.0 189 28.6
Peaxi162Scf00407g00210 Petunia axillaris HOM05D002846 ORTHO05D002692 1.7e-06 57.0 165 34.5
MELO3C018090.2 Cucumis melo HOM05D002846 ORTHO05D002692 2.2e-06 56.6 180 33.3
Lalb_Chr14g0367581 Lupinus albus HOM05D002846 ORTHO05D002692 2.2e-06 56.6 182 28.6
Thhalv10011976m.g Eutrema salsugineum HOM05D010922 ORTHO05D011067 2.9e-06 56.2 196 29.1
Gohir.A12G156600 Gossypium hirsutum HOM05D002846 ORTHO05D002692 2.9e-06 56.2 172 33.7
RcHm_v2.0_Chr2g0159761 Rosa chinensis HOM05D002846 ORTHO05D002692 2.9e-06 56.2 180 32.8
FAN21G2316 Fragaria x ananassa HOM05D002846 ORTHO05D002692 3.7e-06 55.8 193 31.6
Medtr2g088590 Medicago truncatula HOM05D002846 ORTHO05D002692 3.7e-06 55.8 162 36.4
Sabra11G0121900 Salix brachista HOM05D002846 ORTHO05D002692 3.7e-06 55.8 181 33.1
TPR.G4595 Trifolium pratense HOM05D002846 ORTHO05D002692 3.7e-06 55.8 188 32.4
Atru.chr6.3164 Acer truncatum HOM05D002846 ORTHO05D002692 4.9e-06 55.5 224 30.4
FAN02G4078 Fragaria x ananassa HOM05D002846 ORTHO05D002692 4.9e-06 55.5 185 33.5
MD09G1107000 Malus domestica HOM05D002846 ORTHO05D002692 4.9e-06 55.5 202 31.7
Duzib251G0618 Durio zibethinus HOM05D002846 ORTHO05D002692 6.4e-06 55.1 195 34.9
Gohir.D12G159433 Gossypium hirsutum HOM05D002846 ORTHO05D002692 6.4e-06 55.1 178 32.6
Gorai.008G172600 Gossypium raimondii HOM05D002846 ORTHO05D002692 8.3e-06 54.7 181 33.7
Peaxi162Scf00932g00218 Petunia axillaris HOM05D002846 ORTHO05D002692 8.3e-06 54.7 192 31.2


User provided reference genes

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