Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p11370 Brassica napus HOM05D006017 ORTHO05D007821 1.2e-129 466.5 221 100.0
Sp6g16110 Schrenkiella parvula HOM05D006017 ORTHO05D007821 2.9e-48 196.1 249 50.2
BcaB05g22107 Brassica carinata HOM05D006017 ORTHO05D007821 1.1e-47 194.1 249 50.2
A02p10590 Brassica napus HOM05D006017 ORTHO05D007821 1.5e-47 193.7 249 49.8
C02p17670 Brassica napus HOM05D006017 ORTHO05D007821 1.5e-47 193.7 249 49.8
BraA02t06124Z Brassica rapa HOM05D006017 ORTHO05D007821 1.5e-47 193.7 249 49.8
BolC2t07897H Brassica oleracea HOM05D006017 ORTHO05D007821 1.9e-47 193.4 249 49.4
Aa31LG3G9950 Aethionema arabicum HOM05D006017 ORTHO05D007821 2.5e-47 193.0 248 50.0
BcaC03g14354 Brassica carinata HOM05D006017 ORTHO05D007821 2.5e-47 193.0 249 49.4
AL8G29200 Arabidopsis lyrata HOM05D006017 ORTHO05D007821 5.5e-47 191.8 249 50.2
CARHR267270 Cardamine hirsuta HOM05D006017 ORTHO05D007821 9.5e-47 191.0 249 49.8
Gorai.002G065000 Gossypium raimondii HOM05D006017 ORTHO05D007821 9.5e-47 191.0 249 51.4
Gohir.D01G045400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 1.6e-46 190.3 249 51.4
Gohir.A01G059400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 3.6e-46 189.1 249 51.0
Potri.001G374100 Populus trichocarpa HOM05D006017 ORTHO05D007821 3.6e-46 189.1 249 48.2
Cpa.g.sc131.80 Carica papaya HOM05D006017 ORTHO05D007821 4.7e-46 188.7 249 49.0
Carub.0008s1436 Capsella rubella HOM05D006017 ORTHO05D007821 6.1e-46 188.3 254 50.0
Migut.M00760 Erythranthe guttata HOM05D006017 ORTHO05D007821 6.1e-46 188.3 249 49.4
Thecc.07G102400 Theobroma cacao HOM05D006017 ORTHO05D007821 6.1e-46 188.3 249 49.4
AT5G54080 Arabidopsis thaliana HOM05D006017 ORTHO05D007821 8.0e-46 188.0 254 50.0
EL10Ac4g08290 Beta vulgaris HOM05D006017 ORTHO05D007821 8.0e-46 188.0 252 47.2
Cc05_g11510 Coffea canephora HOM05D006017 ORTHO05D007821 8.0e-46 188.0 249 49.0
DCAR_028453 Daucus carota HOM05D006017 ORTHO05D007821 8.0e-46 188.0 249 47.4
Dinv14956 Davidia involucrata HOM05D006017 ORTHO05D007821 8.0e-46 188.0 249 47.4
Manes.03G103900 Manihot esculenta HOM05D006017 ORTHO05D007821 8.0e-46 188.0 249 49.0
Nn1g04303 Nelumbo nucifera HOM05D006017 ORTHO05D007821 1.4e-45 187.2 249 48.6
CDE02G3882 Ceratophyllum demersum HOM05D006017 ORTHO05D007821 1.8e-45 186.8 229 50.2
Lsat_1_v5_gn_9_98620 Lactuca sativa HOM05D006017 ORTHO05D007821 1.8e-45 186.8 249 47.8
Lj8A152T86 Lonicera japonica HOM05D006017 ORTHO05D007821 1.8e-45 186.8 249 48.6
CAN.G739.4 Capsicum annuum HOM05D006017 ORTHO05D007821 2.3e-45 186.4 252 48.0
Hma1.2p1_0416F.1_g148570 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 2.3e-45 186.4 249 47.8
ClCG07G009900 Citrullus lanatus HOM05D006017 ORTHO05D007821 3.0e-45 186.0 250 49.2
AUR62019513 Chenopodium quinoa HOM05D006017 ORTHO05D007821 4.0e-45 185.7 255 45.9
Rhsim04G0023700 Rhododendron simsii HOM05D006017 ORTHO05D007821 4.0e-45 185.7 251 46.6
MSTRG.14945 Avicennia marina HOM05D006017 ORTHO05D007821 5.2e-45 185.3 249 48.2
Ciclev10008509m.g Citrus clementina HOM05D006017 ORTHO05D007821 5.2e-45 185.3 252 48.0
Sabra16G0246500 Salix brachista HOM05D006017 ORTHO05D007821 6.8e-45 184.9 249 47.8
Solyc12g014100.2 Solanum lycopersicum HOM05D006017 ORTHO05D007821 8.8e-45 184.5 249 47.4
Sopen12g005880 Solanum pennellii HOM05D006017 ORTHO05D007821 8.8e-45 184.5 249 47.4
Atru.chr2.2344 Acer truncatum HOM05D006017 ORTHO05D007821 1.2e-44 184.1 249 48.6
CANSAT35G1773 Cannabis sativa HOM05D006017 ORTHO05D007821 1.2e-44 184.1 249 47.4
CiPaw.12G115700 Carya illinoinensis HOM05D006017 ORTHO05D007821 1.5e-44 183.7 249 47.0
ECA240G4517 Erigeron canadensis HOM05D006017 ORTHO05D007821 1.5e-44 183.7 249 47.4
RcHm_v2.0_Chr5g0031821 Rosa chinensis HOM05D006017 ORTHO05D007821 1.5e-44 183.7 249 47.8
QL08p027671 Quercus lobata HOM05D006017 ORTHO05D007821 2.0e-44 183.3 249 47.4
HPP92_003902 Vanilla planifolia HOM05D006017 ORTHO05D007821 2.0e-44 183.3 249 49.8
MELO3C016089.2 Cucumis melo HOM05D006017 ORTHO05D007821 2.6e-44 183.0 252 49.2
CsaV3_4G008430 Cucumis sativus L. HOM05D006017 ORTHO05D007821 2.6e-44 183.0 252 48.8
MBI07_g06432_MAGBIO Magnolia biondii HOM05D006017 ORTHO05D007821 2.6e-44 183.0 249 47.4
Sc03g0010290 Simmondsia chinensis HOM05D006017 ORTHO05D007821 2.6e-44 183.0 251 47.4
Sed0020976 Sechium edule HOM05D006017 ORTHO05D007821 3.4e-44 182.6 253 49.0
arahy.Tifrunner.gnm1.ann1.DSNA77 Arachis hypogaea HOM05D006017 ORTHO05D007821 4.4e-44 182.2 249 47.0
Eucgr.F01185 Eucalyptus grandis HOM05D006017 ORTHO05D007821 5.7e-44 181.8 251 47.8
THA.LOC104811882 Tarenaya hassleriana HOM05D006017 ORTHO05D007821 7.5e-44 181.4 252 49.6
Eucgr.F01184 Eucalyptus grandis HOM05D006017 ORTHO05D007821 9.8e-44 181.0 251 46.2
FAN11G3087 Fragaria x ananassa HOM05D006017 ORTHO05D007821 9.8e-44 181.0 249 46.6
PSO541G6385 Papaver somniferum HOM05D006017 ORTHO05D007821 9.8e-44 181.0 250 47.2
TWI38G0439 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 9.8e-44 181.0 249 47.0
arahy.Tifrunner.gnm1.ann1.FV2XB3 Arachis hypogaea HOM05D006017 ORTHO05D007821 1.3e-43 180.6 249 46.6
Cfa019614 Carpinus fangiana HOM05D006017 ORTHO05D007821 1.3e-43 180.6 249 47.0
CiPaw.11G165400 Carya illinoinensis HOM05D006017 ORTHO05D007821 1.3e-43 180.6 250 47.2
HanXRQChr03g0070991 Helianthus annuus HOM05D006017 ORTHO05D007821 1.3e-43 180.6 249 47.0
Lalb_Chr03g0030841 Lupinus albus HOM05D006017 ORTHO05D007821 1.3e-43 180.6 251 46.2
PGSC0003DMG400015330 Solanum tuberosum HOM05D006017 ORTHO05D007821 1.3e-43 180.6 249 47.0
VMungo1127G0952 Vigna mungo HOM05D006017 ORTHO05D007821 1.3e-43 180.6 251 46.2
CSS0036883 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 1.7e-43 180.3 249 47.4
GSVIVG01014248001 Vitis vinifera HOM05D006017 ORTHO05D007821 1.7e-43 180.3 249 48.2
Prupe.4G172100 Prunus persica HOM05D006017 ORTHO05D007821 2.2e-43 179.9 249 47.0
PGR083G0123 Punica granatum HOM05D006017 ORTHO05D007821 2.2e-43 179.9 249 47.0
Phvul.011G148800 Phaseolus vulgaris HOM05D006017 ORTHO05D007821 3.7e-43 179.1 251 46.2
ATR0749G089 Amborella trichopoda HOM05D006017 ORTHO05D007821 4.9e-43 178.7 249 45.8
Glyma.12G158600 Glycine max HOM05D006017 ORTHO05D007821 4.9e-43 178.7 252 45.2
Os06g0103300 Oryza sativa ssp. japonica HOM05D006017 ORTHO05D007821 6.3e-43 178.3 249 47.0
PSO675G4947 Papaver somniferum HOM05D006017 ORTHO05D007821 1.4e-42 177.2 258 45.7
Actinidia18784 Actinidia chinensis HOM05D006017 ORTHO05D007821 1.8e-42 176.8 252 46.0
FAN16G2700 Fragaria x ananassa HOM05D006017 ORTHO05D007821 1.8e-42 176.8 249 46.2
Aqoxy1G02214 Aquilegia oxysepala HOM05D006017 ORTHO05D007821 2.4e-42 176.4 250 45.6
Lj3g0015312 Lotus japonicus HOM05D006017 ORTHO05D007821 2.4e-42 176.4 252 46.0
Psat4g138640 Pisum sativum HOM05D006017 ORTHO05D007821 2.4e-42 176.4 252 44.8
vmacro09508 Vaccinium macrocarpon HOM05D006017 ORTHO05D007821 2.4e-42 176.4 267 43.1
Zm00001eb379510 Zea mays HOM05D006017 ORTHO05D007821 2.4e-42 176.4 263 46.4
Haze_09368 Corylus avellana HOM05D006017 ORTHO05D007821 5.4e-42 175.3 269 45.4
Ca_23058_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 9.2e-42 174.5 251 45.0
Ca_30664_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 9.2e-42 174.5 251 45.0
Medtr8g463280 Medicago truncatula HOM05D006017 ORTHO05D007821 1.2e-41 174.1 249 45.4
Peaxi162Scf00000g00262 Petunia axillaris HOM05D006017 ORTHO05D007821 1.6e-41 173.7 249 46.6
Hund22764 Selenicereus undatus HOM05D006017 ORTHO05D007821 1.6e-41 173.7 270 42.6
Oeu061327.1 Olea europaea HOM05D006017 ORTHO05D007821 1.0e-40 171.0 283 41.3
Oeu061328.1 Olea europaea HOM05D006017 ORTHO05D007821 1.0e-40 171.0 283 41.3
FAN21G1753 Fragaria x ananassa HOM05D006017 ORTHO05D007821 2.9e-40 169.5 278 41.7
Thhalv10013691m.g Eutrema salsugineum HOM05D006017 ORTHO05D007821 1.1e-39 167.5 217 48.4
unitig_46.g18314 Utricularia gibba HOM05D006017 ORTHO05D007821 2.5e-39 166.4 252 44.0
Mapoly0078s0002 Marchantia polymorpha HOM05D006017 ORTHO05D007821 3.6e-38 162.5 251 42.6
AUR62036125 Chenopodium quinoa HOM05D006017 ORTHO05D007821 6.1e-38 161.8 255 42.7
Duzib170G0488 Durio zibethinus HOM05D006017 ORTHO05D007821 4.0e-37 159.1 213 47.9
Hma1.2p1_0416F.1_g148580 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 4.4e-36 155.6 213 46.0
SalBow8G4076 Salvia bowleyana HOM05D006017 ORTHO05D007821 3.7e-35 152.5 213 46.5
Pp3c16_940 Physcomitrium patens HOM05D006017 ORTHO05D007821 1.8e-34 150.2 254 40.2
FvH4_3g19020 Fragaria vesca HOM05D006017 ORTHO05D007821 3.2e-34 149.4 252 42.1
Nitab4.5_0003077g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 4.1e-34 149.1 243 42.0
AagrBONN_evm.TU.Sc2ySwM_228.2578 Anthoceros agrestis HOM05D006017 ORTHO05D007821 5.4e-34 148.7 251 41.4
SMO119G0176 Selaginella moellendorffii HOM05D006017 ORTHO05D007821 7.0e-34 148.3 250 42.4
Nitab4.5_0005445g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 1.7e-32 143.7 256 41.8
MD03G1237500 Malus domestica HOM05D006017 ORTHO05D007821 3.6e-30 136.0 197 44.2
SGA_v2.0_scaffold73G24213 Striga asiatica HOM05D006017 ORTHO05D007821 2.0e-28 130.2 268 38.8
PRCOL_00000185 Prasinoderma coloniale HOM05D006017 ORTHO05D007821 3.7e-27 125.9 267 36.7
Cre02.g091200 Chlamydomonas reinhardtii HOM05D006017 ORTHO05D007821 1.1e-26 124.4 252 36.9
C09p44170 Brassica napus HOM05D006017 ORTHO05D017343 1.9e-26 123.6 200 43.5
Ah.04g164440 Amaranthus hybridus HOM05D006017 ORTHO05D007821 3.5e-25 119.4 228 39.0
FAN25G2436 Fragaria x ananassa HOM05D006017 ORTHO05D007821 5.0e-24 115.5 92 63.0
TPR.G22540 Trifolium pratense HOM05D006017 ORTHO05D007821 7.3e-23 111.7 238 36.1
BraA10t43231Z Brassica rapa HOM05D006017 ORTHO05D017343 2.6e-20 103.2 53 90.6
BcaC04g20394 Brassica carinata HOM05D006017 ORTHO05D007821 5.4e-18 95.5 129 48.1
Glyma.06G234200 Glycine max HOM05D006017 ORTHO05D007821 7.3e-15 85.1 164 37.8
CSS0003418 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 2.9e-11 73.2 169 37.3
Nitab4.5_0004022g0010 Nicotiana tabacum HOM05D006017 ORTHO05D007821 1.0e-08 64.7 36 80.6
MD03G1237300 Malus domestica HOM05D006017 ORTHO05D007821 6.2e-06 55.5 48 62.5


User provided reference genes

Program Settings