Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p11250 Brassica napus HOM05D006845 ORTHO05D009300 3.6e-252 874.4 423 100.0
C09p43870 Brassica napus HOM05D006845 ORTHO05D009300 7.9e-252 873.2 423 99.8
BcaC04g20411 Brassica carinata HOM05D006845 ORTHO05D009300 3.7e-249 864.4 423 98.8
BcaB08g35745 Brassica carinata HOM05D006845 ORTHO05D009300 4.5e-247 857.4 423 97.4
Sp6g15920 Schrenkiella parvula HOM05D006845 ORTHO05D009300 1.8e-243 845.5 423 95.7
Thhalv10013651m.g Eutrema salsugineum HOM05D006845 ORTHO05D009300 1.1e-240 836.3 423 93.9
AL8G28920 Arabidopsis lyrata HOM05D006845 ORTHO05D009300 2.4e-240 835.1 423 94.8
AT5G53860 Arabidopsis thaliana HOM05D006845 ORTHO05D009300 2.0e-239 832.0 423 94.3
Carub.0008s1415 Capsella rubella HOM05D006845 ORTHO05D009300 7.7e-239 830.1 423 93.4
CARHR266990 Cardamine hirsuta HOM05D006845 ORTHO05D009300 5.0e-238 827.4 423 93.9
BolC9t57269H Brassica oleracea HOM05D006845 ORTHO05D009300 1.6e-231 805.8 434 91.5
BraA10t43218Z Brassica rapa HOM05D006845 ORTHO05D009300 2.9e-230 801.6 468 86.3
Aa31LG3G10070 Aethionema arabicum HOM05D006845 ORTHO05D009300 9.1e-224 780.0 402 93.3
THA.LOC104811867 Tarenaya hassleriana HOM05D006845 ORTHO05D009300 1.6e-212 742.7 423 83.7
Thecc.07G091800 Theobroma cacao HOM05D006845 ORTHO05D009300 9.2e-208 726.9 423 79.4
Gohir.D08G031900 Gossypium hirsutum HOM05D006845 ORTHO05D009300 1.3e-206 723.0 423 79.0
Gohir.A08G021200 Gossypium hirsutum HOM05D006845 ORTHO05D009300 8.6e-206 720.3 423 78.7
Gorai.004G029400 Gossypium raimondii HOM05D006845 ORTHO05D009300 3.3e-205 718.4 423 78.5
Prupe.4G179900 Prunus persica HOM05D006845 ORTHO05D009300 1.8e-203 712.6 423 77.5
Manes.15G087900 Manihot esculenta HOM05D006845 ORTHO05D009300 3.0e-203 711.8 423 78.3
PGR083G0376 Punica granatum HOM05D006845 ORTHO05D009300 2.6e-202 708.8 423 77.8
Ciclev10008389m.g Citrus clementina HOM05D006845 ORTHO05D009300 2.4e-200 702.2 427 76.8
Eucgr.F01150 Eucalyptus grandis HOM05D006845 ORTHO05D009300 5.4e-200 701.0 424 76.4
CANSAT56G3540 Cannabis sativa HOM05D006845 ORTHO05D009300 1.0e-198 696.8 426 75.4
GSVIVG01014313001 Vitis vinifera HOM05D006845 ORTHO05D009300 1.0e-198 696.8 424 75.5
COL.COLO4_27185 Corchorus olitorius HOM05D006845 ORTHO05D009300 5.0e-198 694.5 423 75.7
Potri.011G118000 Populus trichocarpa HOM05D006845 ORTHO05D009300 5.0e-198 694.5 421 75.8
Potri.001G398900 Populus trichocarpa HOM05D006845 ORTHO05D009300 6.6e-198 694.1 411 77.6
MD11G1250000 Malus domestica HOM05D006845 ORTHO05D009300 1.9e-197 692.6 420 75.0
RcHm_v2.0_Chr5g0033181 Rosa chinensis HOM05D006845 ORTHO05D009300 2.5e-197 692.2 417 75.5
CSS0022560 Camellia sinensis var. sinensis HOM05D006845 ORTHO05D009300 7.3e-197 690.6 425 73.4
QL08p022228 Quercus lobata HOM05D006845 ORTHO05D009300 1.2e-196 689.9 422 74.6
Nn1g06500 Nelumbo nucifera HOM05D006845 ORTHO05D009300 2.1e-196 689.1 423 74.0
Atru.chr2.2481 Acer truncatum HOM05D006845 ORTHO05D009300 6.2e-196 687.6 412 77.4
FvH4_3g19780 Fragaria vesca HOM05D006845 ORTHO05D009300 8.0e-196 687.2 417 75.5
ClCG11G018010 Citrullus lanatus HOM05D006845 ORTHO05D009300 1.1e-195 686.8 412 75.7
Sed0008037 Sechium edule HOM05D006845 ORTHO05D009300 4.0e-195 684.9 423 74.5
CiPaw.11G170600 Carya illinoinensis HOM05D006845 ORTHO05D009300 8.9e-195 683.7 423 74.7
Solyc12g013890.2 Solanum lycopersicum HOM05D006845 ORTHO05D009300 1.2e-194 683.3 425 73.2
Sopen12g007210 Solanum pennellii HOM05D006845 ORTHO05D009300 1.5e-194 682.9 425 72.9
Dinv14926 Davidia involucrata HOM05D006845 ORTHO05D009300 1.7e-193 679.5 420 74.0
CsaV3_4G033630 Cucumis sativus L. HOM05D006845 ORTHO05D009300 2.2e-193 679.1 423 73.3
TAR627G0110 Trochodendron aralioides HOM05D006845 ORTHO05D009300 2.2e-193 679.1 424 71.9
Cfa020572 Carpinus fangiana HOM05D006845 ORTHO05D009300 4.9e-193 677.9 412 76.7
Lj3g0006633 Lotus japonicus HOM05D006845 ORTHO05D009300 4.9e-193 677.9 417 76.0
Lalb_Chr25g0286311 Lupinus albus HOM05D006845 ORTHO05D009300 1.9e-192 676.0 416 76.2
MELO3C016692.2 Cucumis melo HOM05D006845 ORTHO05D009300 2.4e-192 675.6 417 73.1
arahy.Tifrunner.gnm1.ann1.61G52X Arachis hypogaea HOM05D006845 ORTHO05D009300 5.4e-192 674.5 417 74.8
MD03G1229200 Malus domestica HOM05D006845 ORTHO05D009300 7.0e-192 674.1 421 74.8
PSO541G3085 Papaver somniferum HOM05D006845 ORTHO05D009300 1.2e-191 673.3 424 71.7
PSO675G5588 Papaver somniferum HOM05D006845 ORTHO05D009300 1.2e-191 673.3 424 71.5
TWI39G1089 Tripterygium wilfordii HOM05D006845 ORTHO05D009300 2.0e-191 672.5 423 73.5
CAN.G213.11 Capsicum annuum HOM05D006845 ORTHO05D009300 6.0e-191 671.0 414 74.2
arahy.Tifrunner.gnm1.ann1.ME6152 Arachis hypogaea HOM05D006845 ORTHO05D009300 3.0e-190 668.7 417 74.1
Hma1.2p1_0898F.1_g234490 Hydrangea macrophylla HOM05D006845 ORTHO05D009300 3.0e-190 668.7 412 73.5
Glyma.12G225400 Glycine max HOM05D006845 ORTHO05D009300 6.6e-190 667.5 424 73.3
FAN11G1119 Fragaria x ananassa HOM05D006845 ORTHO05D009300 4.7e-188 661.4 411 74.7
Glyma.13G275900 Glycine max HOM05D006845 ORTHO05D009300 6.2e-188 661.0 424 72.9
MSTRG.14352 Avicennia marina HOM05D006845 ORTHO05D009300 8.1e-188 660.6 425 70.6
Migut.H01945 Erythranthe guttata HOM05D006845 ORTHO05D009300 1.4e-187 659.8 425 70.1
Oeu051072.2 Olea europaea HOM05D006845 ORTHO05D009300 6.8e-187 657.5 450 69.3
AUR62039192 Chenopodium quinoa HOM05D006845 ORTHO05D009300 8.9e-187 657.1 424 70.0
FAN21G2917 Fragaria x ananassa HOM05D006845 ORTHO05D009300 3.4e-186 655.2 426 71.8
EL10Ac4g08199 Beta vulgaris HOM05D006845 ORTHO05D009300 1.7e-185 652.9 423 69.7
Duzib213G0603 Durio zibethinus HOM05D006845 ORTHO05D009300 1.9e-184 649.4 423 72.3
Aqoxy1G02380 Aquilegia oxysepala HOM05D006845 ORTHO05D009300 9.2e-184 647.1 403 72.7
VMungo1080G1688 Vigna mungo HOM05D006845 ORTHO05D009300 4.6e-183 644.8 424 72.2
AUR62019438 Chenopodium quinoa HOM05D006845 ORTHO05D009300 7.8e-183 644.0 412 69.9
HanXRQChr12g0364151 Helianthus annuus HOM05D006845 ORTHO05D009300 1.0e-182 643.7 424 68.2
Phvul.005G073100 Phaseolus vulgaris HOM05D006845 ORTHO05D009300 1.9e-181 639.4 418 72.0
FAN25G1923 Fragaria x ananassa HOM05D006845 ORTHO05D009300 5.6e-181 637.9 417 71.0
DCAR_017135 Daucus carota HOM05D006845 ORTHO05D009300 1.2e-180 636.7 407 70.0
Nitab4.5_0003378g0090 Nicotiana tabacum HOM05D006845 ORTHO05D009300 1.1e-179 633.6 425 69.4
Actinidia18770 Actinidia chinensis HOM05D006845 ORTHO05D009300 9.9e-178 627.1 387 71.8
Sabra16G0261500 Salix brachista HOM05D006845 ORTHO05D009300 2.2e-177 625.9 540 58.5
CDE02G1035 Ceratophyllum demersum HOM05D006845 ORTHO05D009300 4.9e-177 624.8 423 67.4
Peaxi162Scf00000g00345 Petunia axillaris HOM05D006845 ORTHO05D009300 8.4e-177 624.0 425 68.7
Lsat_1_v5_gn_9_97520 Lactuca sativa HOM05D006845 ORTHO05D009300 1.0e-174 617.1 418 67.5
FAN16G0640 Fragaria x ananassa HOM05D006845 ORTHO05D009300 6.6e-174 614.4 411 70.6
ATR0737G060 Amborella trichopoda HOM05D006845 ORTHO05D009300 8.7e-174 614.0 422 66.1
SGA_v2.0_scaffold70G23678 Striga asiatica HOM05D006845 ORTHO05D009300 5.2e-171 604.7 409 68.9
Ca_03508_v3 Cicer arietinum L. HOM05D006845 ORTHO05D009300 6.9e-171 604.4 419 68.5
Nitab4.5_0000332g0060 Nicotiana tabacum HOM05D006845 ORTHO05D009300 2.1e-164 582.8 457 62.1
Ah.06g184430 Amaranthus hybridus HOM05D006845 ORTHO05D009300 3.1e-163 578.9 414 66.2
HPP92_003615 Vanilla planifolia HOM05D006845 ORTHO05D009300 4.0e-163 578.6 422 62.3
Medtr2g079060 Medicago truncatula HOM05D006845 ORTHO05D009300 4.8e-156 555.1 413 65.4
Psat5g242160 Pisum sativum HOM05D006845 ORTHO05D009300 2.4e-155 552.7 401 65.6
Actinidia35244 Actinidia chinensis HOM05D006845 ORTHO05D009300 1.9e-149 533.1 414 60.4
TPR.G7949 Trifolium pratense HOM05D006845 ORTHO05D009300 1.9e-149 533.1 364 68.4
Lj1C841T8 Lonicera japonica HOM05D006845 ORTHO05D009300 7.6e-146 521.2 371 66.0
Sc16g0007040 Simmondsia chinensis HOM05D006845 ORTHO05D009300 9.3e-144 514.2 312 75.0
Haze_09439 Corylus avellana HOM05D006845 ORTHO05D009300 1.3e-140 503.8 380 64.7
Cpa.g.sc80.77 Carica papaya HOM05D006845 ORTHO05D009300 6.9e-139 498.0 423 59.8
ECA240G2176 Erigeron canadensis HOM05D006845 ORTHO05D009300 4.5e-138 495.4 313 71.2
BcaB07g33336 Brassica carinata HOM05D006845 ORTHO05D009300 1.3e-113 414.1 204 96.6
Cc05_g11930 Coffea canephora HOM05D006845 ORTHO05D009300 5.7e-93 345.5 214 71.0
SEGI_13558 Sequoiadendron giganteum HOM05D006845 ORTHO05D009300 2.2e-92 343.6 346 44.8
Pp3c1_32740 Physcomitrium patens HOM05D006845 ORTHO05D009300 2.8e-87 326.6 345 45.5
Cc05_g11920 Coffea canephora HOM05D006845 ORTHO05D009300 1.1e-83 314.7 204 71.6
AagrBONN_evm.TU.Sc2ySwM_344.572 Anthoceros agrestis HOM05D006845 ORTHO05D009300 2.4e-83 313.5 382 41.1
Mapoly0037s0133 Marchantia polymorpha HOM05D006845 ORTHO05D009300 1.2e-74 284.6 347 38.6
SMO143G0137 Selaginella moellendorffii HOM05D006845 ORTHO05D009300 1.4e-62 244.6 280 42.9
unitig_899.g15568 Utricularia gibba HOM05D006845 ORTHO05D009300 2.7e-42 177.2 106 74.5
BcaB04g16942 Brassica carinata HOM05D006845 ORTHO05D009300 4.3e-40 169.9 140 67.9
Sabra11G0103000 Salix brachista HOM05D006845 ORTHO05D009300 1.5e-37 161.4 85 84.7
Lsat_1_v5_gn_7_87221 Lactuca sativa HOM05D003066 ORTHO05D004162 2.2e-36 157.5 103 65.0
Lsat_1_v5_gn_4_31781 Lactuca sativa HOM05D006845 ORTHO05D014206 2.1e-34 151.0 106 62.3
Lsat_1_v5_gn_5_134240 Lactuca sativa HOM05D006845 ORTHO05D014206 2.1e-34 151.0 106 62.3
Lsat_1_v5_gn_7_62660 Lactuca sativa HOM05D006845 ORTHO05D014206 7.9e-34 149.1 103 62.1
FAN12G2298 Fragaria x ananassa HOM05D006845 ORTHO05D014206 3.8e-12 77.0 49 67.3
FAN25G3098 Fragaria x ananassa HOM05D006845 ORTHO05D014206 2.5e-11 74.3 49 65.3
FAN05G4902 Fragaria x ananassa HOM05D006845 ORTHO05D014206 3.2e-11 73.9 50 64.0
MBI02_g32976_MAGBIO Magnolia biondii HOM05D000872 ORTHO05D014206 1.4e-09 68.6 56 55.4
FAN09G2373 Fragaria x ananassa HOM05D006845 ORTHO05D014206 2.0e-08 64.7 48 58.3
Hma1.2p1_0554F.1_g177810 Hydrangea macrophylla HOM05D006845 ORTHO05D014206 1.7e-07 61.6 45 60.0


User provided reference genes

Program Settings