Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p11030 Brassica napus HOM05D004201 ORTHO05D012052 1.2e-89 333.2 168 100.0
BraA10t43195Z Brassica rapa HOM05D004201 ORTHO05D012052 1.2e-89 333.2 168 100.0
BcaB02g06909 Brassica carinata HOM05D004201 ORTHO05D012052 1.8e-61 239.6 154 80.5
AL1G13240 Arabidopsis lyrata HOM05D004201 ORTHO05D012052 6.5e-40 167.9 154 59.1
AL1G13250 Arabidopsis lyrata HOM05D004201 ORTHO05D012052 2.7e-38 162.5 153 60.1
AT1G03710 Arabidopsis thaliana HOM05D004201 ORTHO05D012052 3.5e-33 145.6 154 56.5
A10p02260 Brassica napus HOM05D004201 ORTHO05D012052 4.2e-31 138.7 147 55.1
BraA10t42492Z Brassica rapa HOM05D004201 ORTHO05D012052 4.2e-31 138.7 147 55.1
A10p02210 Brassica napus HOM05D004201 ORTHO05D012052 3.0e-29 132.5 159 51.6
BraA10t42489Z Brassica rapa HOM05D004201 ORTHO05D012052 3.0e-29 132.5 159 51.6
Carub.0001s0282 Capsella rubella HOM05D004201 ORTHO05D012052 1.3e-27 127.1 127 52.8
BcaC05g24515 Brassica carinata HOM05D004201 ORTHO05D012052 1.0e-24 117.5 128 52.3
C05p02080 Brassica napus HOM05D004201 ORTHO05D012052 1.0e-24 117.5 128 52.3
BolC5t28985H Brassica oleracea HOM05D004201 ORTHO05D012052 1.0e-24 117.5 128 52.3
AL1G13200 Arabidopsis lyrata HOM05D004201 ORTHO05D012052 1.2e-20 104.0 111 49.5
Thhalv10008370m.g Eutrema salsugineum HOM05D004201 ORTHO05D012052 9.8e-20 100.9 129 48.1
AL1G13220 Arabidopsis lyrata HOM05D004201 ORTHO05D012052 2.0e-17 93.2 101 47.5
AL1G13230 Arabidopsis lyrata HOM05D004201 ORTHO05D012052 1.3e-16 90.5 103 44.7
THA.LOC104809658 Tarenaya hassleriana HOM05D004201 ORTHO05D012052 1.6e-14 83.6 113 43.4
THA.LOC104809406 Tarenaya hassleriana HOM05D004201 ORTHO05D012052 7.8e-09 64.7 176 32.4
THA.LOC104809407 Tarenaya hassleriana HOM05D004201 ORTHO05D012052 2.3e-08 63.2 176 31.8
BraA01t04445Z Brassica rapa HOM05D014826 ORTHO05D014863 6.6e-08 61.6 126 34.1
CARHR003040 Cardamine hirsuta HOM05D004201 ORTHO05D012052 6.6e-08 61.6 65 44.6
BNapus_Darmor_BZH_scaffold_118p00220 Brassica napus HOM05D014826 ORTHO05D014863 8.6e-08 61.2 126 34.1
THA.LOC104801127 Tarenaya hassleriana HOM05D004201 ORTHO05D012594 5.6e-07 58.5 116 33.6
THA.LOC104801128 Tarenaya hassleriana HOM05D004201 ORTHO05D012594 9.5e-07 57.8 116 33.6
Carub.0001s0281 Capsella rubella HOM05D004201 ORTHO05D012052 2.1e-06 56.6 104 40.4
THA.LOC104801126 Tarenaya hassleriana HOM05D004201 ORTHO05D012594 2.8e-06 56.2 180 30.6
BraA03t12217Z Brassica rapa HOM05D012310 ORTHO05D012594 3.6e-06 55.8 103 35.0
THA.LOC104801147 Tarenaya hassleriana HOM05D004201 ORTHO05D012594 6.2e-06 55.1 175 30.9


User provided reference genes

Program Settings