Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p10270 Brassica napus HOM05D003606 ORTHO05D004650 1.5e-122 443.0 233 100.0
BraA10t43107Z Brassica rapa HOM05D003606 ORTHO05D004650 1.6e-121 439.5 233 99.6
Thhalv10013442m.g Eutrema salsugineum HOM05D003606 ORTHO05D004650 2.0e-92 342.8 254 77.2
BcaB05g21983 Brassica carinata HOM05D003606 ORTHO05D004650 1.0e-91 340.5 259 76.1
BcaC03g14497 Brassica carinata HOM05D003606 ORTHO05D004650 1.9e-90 336.3 260 75.8
C02p19350 Brassica napus HOM05D003606 ORTHO05D004650 1.9e-90 336.3 260 75.8
BolC2t08070H Brassica oleracea HOM05D003606 ORTHO05D004650 1.9e-90 336.3 260 75.8
A02p11600 Brassica napus HOM05D003606 ORTHO05D004650 1.6e-89 333.2 260 75.4
BraA02t06222Z Brassica rapa HOM05D003606 ORTHO05D004650 1.6e-89 333.2 260 75.4
Sp6g14980 Schrenkiella parvula HOM05D003606 ORTHO05D004650 5.8e-87 324.7 246 76.0
Carub.0008s1298 Capsella rubella HOM05D003606 ORTHO05D004650 3.7e-86 322.0 254 72.8
CARHR265750 Cardamine hirsuta HOM05D003606 ORTHO05D004650 1.1e-85 320.5 258 72.1
AT5G52820 Arabidopsis thaliana HOM05D003606 ORTHO05D004650 3.2e-85 318.9 257 71.6
AL8G27260 Arabidopsis lyrata HOM05D003606 ORTHO05D004650 7.1e-85 317.8 248 73.4
BcaC04g20537 Brassica carinata HOM05D003606 ORTHO05D004650 1.0e-83 313.9 256 70.7
Aa31LG3G9060 Aethionema arabicum HOM05D003606 ORTHO05D004650 8.6e-83 310.8 259 71.0
BcaB08g35635 Brassica carinata HOM05D003606 ORTHO05D004650 1.7e-78 296.6 263 63.1
THA.LOC104819092 Tarenaya hassleriana HOM05D003606 ORTHO05D004650 3.5e-76 288.9 261 65.5
Ah.10g038660 Amaranthus hybridus HOM05D003606 ORTHO05D004650 3.1e-72 275.8 268 53.4
Ciclev10015115m.g Citrus clementina HOM05D003606 ORTHO05D004650 3.1e-72 275.8 256 62.9
SalBow4G1900 Salvia bowleyana HOM05D003606 ORTHO05D004650 4.4e-71 271.9 266 60.9
SGA_v2.0_scaffold138G35254 Striga asiatica HOM05D003606 ORTHO05D004650 5.8e-71 271.6 256 62.1
Actinidia02534 Actinidia chinensis HOM05D000009 ORTHO05D004650 2.9e-70 269.2 260 61.2
ClCG10G012220 Citrullus lanatus HOM05D003606 ORTHO05D004650 3.8e-70 268.9 253 64.0
PGR031G1688 Punica granatum HOM05D003606 ORTHO05D004650 8.4e-70 267.7 261 62.1
C09p70260 Brassica napus HOM05D003606 ORTHO05D004650 1.4e-69 266.9 261 62.5
RcHm_v2.0_Chr1g0317321 Rosa chinensis HOM05D003606 ORTHO05D004650 1.9e-69 266.5 261 61.7
BcaNung04849 Brassica carinata HOM05D003606 ORTHO05D004650 1.6e-68 263.5 252 62.7
BolC9t59770H Brassica oleracea HOM05D003606 ORTHO05D004650 1.6e-68 263.5 252 62.7
BraA10t45027Z Brassica rapa HOM05D003606 ORTHO05D004650 7.8e-68 261.2 252 62.3
arahy.Tifrunner.gnm1.ann1.ZXEF1Z Arachis hypogaea HOM05D003606 ORTHO05D004650 1.3e-67 260.4 219 59.4
FAN01G0800 Fragaria x ananassa HOM05D003606 ORTHO05D004650 1.5e-66 256.9 261 59.0
arahy.Tifrunner.gnm1.ann1.GAUK41 Arachis hypogaea HOM05D003606 ORTHO05D004650 1.9e-66 256.5 219 67.1
FAN03G2659 Fragaria x ananassa HOM05D003606 ORTHO05D004650 1.9e-66 256.5 255 59.2
FAN10G3084 Fragaria x ananassa HOM05D003606 ORTHO05D004650 1.9e-66 256.5 255 59.2
FvH4_7g01500 Fragaria vesca HOM05D003606 ORTHO05D004650 3.3e-66 255.8 261 59.0
Dinv09318 Davidia involucrata HOM05D003606 ORTHO05D004650 4.3e-66 255.4 261 58.6
arahy.Tifrunner.gnm1.ann1.F9F3MK Arachis hypogaea HOM05D003606 ORTHO05D004650 5.6e-66 255.0 219 66.7
Cc02_g29020 Coffea canephora HOM05D003606 ORTHO05D004650 5.6e-66 255.0 253 60.5
FAN06G2132 Fragaria x ananassa HOM05D003606 ORTHO05D004650 1.6e-65 253.4 258 58.1
arahy.Tifrunner.gnm1.ann1.V59V4E Arachis hypogaea HOM05D003606 ORTHO05D004650 2.1e-65 253.1 219 66.2
BolC7t45366H Brassica oleracea HOM05D003606 ORTHO05D004650 2.1e-65 253.1 253 60.1
Thecc.01G407200 Theobroma cacao HOM05D003606 ORTHO05D004650 2.8e-65 252.7 262 58.8
Thhalv10025051m.g Eutrema salsugineum HOM05D003606 ORTHO05D004650 4.8e-65 251.9 253 58.9
Nn5g28763 Nelumbo nucifera HOM05D003606 ORTHO05D004650 1.1e-64 250.8 261 59.4
Atru.chr11.2590 Acer truncatum HOM05D003606 ORTHO05D004650 1.4e-64 250.4 256 59.8
HanXRQChr16g0524861 Helianthus annuus HOM05D003606 ORTHO05D004650 1.4e-64 250.4 251 61.0
Sabra09G0042600 Salix brachista HOM05D003606 ORTHO05D004650 1.4e-64 250.4 251 59.4
HanXRQChr17g0563081 Helianthus annuus HOM05D003606 ORTHO05D004650 1.8e-64 250.0 260 59.2
VMungo0464G1676 Vigna mungo HOM05D003606 ORTHO05D004650 2.4e-64 249.6 251 59.4
Eucgr.G03357 Eucalyptus grandis HOM05D003606 ORTHO05D004650 3.1e-64 249.2 251 60.6
Prupe.2G020500 Prunus persica HOM05D003606 ORTHO05D004650 3.1e-64 249.2 249 60.2
SGA_v2.0_scaffold1G00601 Striga asiatica HOM05D003606 ORTHO05D004650 3.1e-64 249.2 256 59.8
GSVIVG01032166001 Vitis vinifera HOM05D003606 ORTHO05D004650 3.1e-64 249.2 261 57.5
Migut.D00412 Erythranthe guttata HOM05D003606 ORTHO05D004650 5.3e-64 248.4 249 60.6
Lj5g0022697 Lotus japonicus HOM05D003606 ORTHO05D004650 5.3e-64 248.4 251 59.0
Gohir.D08G163700 Gossypium hirsutum HOM05D003606 ORTHO05D004650 6.9e-64 248.1 262 58.4
Gorai.004G170600 Gossypium raimondii HOM05D003606 ORTHO05D004650 6.9e-64 248.1 262 58.4
CDE02G3858 Ceratophyllum demersum HOM05D003606 ORTHO05D004650 9.0e-64 247.7 251 59.8
Gohir.A08G142700 Gossypium hirsutum HOM05D003606 ORTHO05D004650 9.0e-64 247.7 262 58.4
Lj3A990T71 Lonicera japonica HOM05D003606 ORTHO05D004650 9.0e-64 247.7 251 59.0
MSTRG.2635 Avicennia marina HOM05D003606 ORTHO05D004650 1.2e-63 247.3 256 58.6
Cpa.g.sc19.249 Carica papaya HOM05D003606 ORTHO05D004650 1.2e-63 247.3 252 59.1
Cfa010803 Carpinus fangiana HOM05D003606 ORTHO05D004650 1.5e-63 246.9 252 59.1
Lsat_1_v5_gn_4_31941 Lactuca sativa HOM05D003606 ORTHO05D004650 2.0e-63 246.5 260 59.2
Sc23g0005910 Simmondsia chinensis HOM05D003606 ORTHO05D004650 2.0e-63 246.5 256 58.6
Haze_03155 Corylus avellana HOM05D003606 ORTHO05D004650 2.6e-63 246.1 260 58.5
COL.COLO4_04879 Corchorus olitorius HOM05D003606 ORTHO05D004650 3.4e-63 245.7 262 58.8
MELO3C023992.2 Cucumis melo HOM05D003606 ORTHO05D004650 4.5e-63 245.4 252 60.3
CsaV3_3G031990 Cucumis sativus L. HOM05D003606 ORTHO05D004650 4.5e-63 245.4 252 60.3
Dinv43413 Davidia involucrata HOM05D003606 ORTHO05D004650 4.5e-63 245.4 261 57.1
Duzib138G0203 Durio zibethinus HOM05D003606 ORTHO05D004650 4.5e-63 245.4 262 58.0
Glyma.16G165100 Glycine max HOM05D003606 ORTHO05D004650 4.5e-63 245.4 251 58.2
Phvul.004G092500 Phaseolus vulgaris HOM05D003606 ORTHO05D004650 4.5e-63 245.4 266 56.8
QL06p005538 Quercus lobata HOM05D003606 ORTHO05D004650 4.5e-63 245.4 261 57.1
BcaC06g33533 Brassica carinata HOM05D003606 ORTHO05D004650 5.8e-63 245.0 278 55.0
Potri.009G058000 Populus trichocarpa HOM05D003606 ORTHO05D004650 7.6e-63 244.6 251 58.6
Manes.10G139000 Manihot esculenta HOM05D003606 ORTHO05D004650 9.9e-63 244.2 251 59.0
Aqoxy2G00153 Aquilegia oxysepala HOM05D003606 ORTHO05D004650 1.3e-62 243.8 252 59.5
vmacro13693 Vaccinium macrocarpon HOM05D003606 ORTHO05D004650 1.7e-62 243.4 254 57.9
TWI32G0899 Tripterygium wilfordii HOM05D003606 ORTHO05D004650 2.2e-62 243.0 261 57.1
AUR62023088 Chenopodium quinoa HOM05D003606 ORTHO05D004650 3.8e-62 242.3 261 56.7
AUR62029807 Chenopodium quinoa HOM05D003606 ORTHO05D004650 3.8e-62 242.3 261 56.7
CiPaw.05G162700 Carya illinoinensis HOM05D003606 ORTHO05D004650 8.4e-62 241.1 261 57.1
CiPaw.05G024300 Carya illinoinensis HOM05D003606 ORTHO05D004650 1.4e-61 240.4 261 56.7
Glyma.02G080600 Glycine max HOM05D003606 ORTHO05D004650 1.9e-61 240.0 251 57.4
PSO675G6796 Papaver somniferum HOM05D003606 ORTHO05D004650 1.9e-61 240.0 263 57.0
Solyc03g112530.3 Solanum lycopersicum HOM05D003606 ORTHO05D004650 1.9e-61 240.0 258 57.0
Sopen03g031590 Solanum pennellii HOM05D003606 ORTHO05D004650 1.9e-61 240.0 258 57.0
PGSC0003DMG400018107 Solanum tuberosum HOM05D003606 ORTHO05D004650 1.9e-61 240.0 258 57.0
C07p48580 Brassica napus HOM05D003606 ORTHO05D004650 5.4e-61 238.4 287 52.6
MD17G1287700 Malus domestica HOM05D003606 ORTHO05D004650 5.4e-61 238.4 250 59.2
TWI34G0860 Tripterygium wilfordii HOM05D003606 ORTHO05D004650 7.1e-61 238.0 261 56.7
Nitab4.5_0001284g0090 Nicotiana tabacum HOM05D003606 ORTHO05D004650 9.3e-61 237.7 260 56.9
PSO541G2647 Papaver somniferum HOM05D003606 ORTHO05D004650 2.1e-60 236.5 263 55.9
Rhsim07G0058400 Rhododendron simsii HOM05D003606 ORTHO05D004650 2.1e-60 236.5 253 57.7
CAN.G338.7 Capsicum annuum HOM05D003606 ORTHO05D004650 4.6e-60 235.3 262 56.5
ECA234G3512 Erigeron canadensis HOM05D003606 ORTHO05D004650 4.6e-60 235.3 262 57.6
Os11g0594200 Oryza sativa ssp. japonica HOM05D003606 ORTHO05D004650 7.9e-60 234.6 260 56.2
ATR0626G036 Amborella trichopoda HOM05D003606 ORTHO05D004650 1.3e-59 233.8 251 56.6
A10p29890 Brassica napus HOM05D003606 ORTHO05D004650 1.8e-59 233.4 259 57.5
Sed0024972 Sechium edule HOM05D003606 ORTHO05D004650 1.8e-59 233.4 251 58.6
DCAR_003761 Daucus carota HOM05D003606 ORTHO05D004650 2.3e-59 233.0 261 55.6
MD02G1305600 Malus domestica HOM05D003606 ORTHO05D004650 3.0e-59 232.6 261 55.6
Ca_19553_v3 Cicer arietinum L. HOM05D003606 ORTHO05D004650 3.9e-59 232.3 251 57.0
MD09G1280600 Malus domestica HOM05D003606 ORTHO05D004650 3.9e-59 232.3 253 57.3
Oeu025828.1 Olea europaea HOM05D003606 ORTHO05D004650 1.1e-58 230.7 362 44.2
Os10g0104500 Oryza sativa ssp. japonica HOM05D003606 ORTHO05D004650 1.1e-58 230.7 256 55.1
TPR.G14490 Trifolium pratense HOM05D003606 ORTHO05D004650 1.5e-58 230.3 251 56.6
Lalb_Chr21g0315701 Lupinus albus HOM05D003606 ORTHO05D004650 7.4e-58 228.0 256 54.3
Peaxi162Scf00089g01530 Petunia axillaris HOM05D003606 ORTHO05D004650 9.6e-58 227.6 226 61.9
Zm00001eb297740 Zea mays HOM05D003606 ORTHO05D004650 1.6e-57 226.9 248 56.5
CANSAT01G2566 Cannabis sativa HOM05D003606 ORTHO05D004650 1.4e-56 223.8 255 52.9
Manes.07G008500 Manihot esculenta HOM05D003606 ORTHO05D004650 3.1e-56 222.6 221 59.3
BcaNung04664 Brassica carinata HOM05D003606 ORTHO05D004650 1.5e-55 220.3 253 56.5
Medtr1g054300 Medicago truncatula HOM05D003606 ORTHO05D004650 2.0e-55 219.9 251 55.0
Hund00228 Selenicereus undatus HOM05D003606 ORTHO05D004650 2.0e-55 219.9 258 51.9
Psat6g110240 Pisum sativum HOM05D003606 ORTHO05D004650 2.9e-54 216.1 251 54.2
SGA_v2.0_scaffold90G27689 Striga asiatica HOM05D003606 ORTHO05D004650 3.8e-54 215.7 173 72.8
PSO541G4704 Papaver somniferum HOM05D003606 ORTHO05D004650 8.4e-54 214.5 241 54.8
SEGI_00890 Sequoiadendron giganteum HOM05D003606 ORTHO05D004650 4.2e-53 212.2 248 52.4
TPR.G7603 Trifolium pratense HOM05D003606 ORTHO05D004650 3.9e-51 205.7 176 68.8
TAR633G2243 Trochodendron aralioides HOM05D003606 ORTHO05D004650 6.7e-51 204.9 170 70.0
Hund21610 Selenicereus undatus HOM05D003606 ORTHO05D004650 8.7e-51 204.5 268 50.4
SHI00285 Sapria himalayana HOM05D003606 ORTHO05D004650 9.6e-50 201.1 286 46.9
Nitab4.5_0012005g0010 Nicotiana tabacum HOM05D003606 ORTHO05D004650 2.4e-48 196.4 254 51.6
CBR_g38286 Chara braunii HOM05D003606 ORTHO05D004650 1.2e-47 194.1 259 48.6
AUR62009405 Chenopodium quinoa HOM05D003606 ORTHO05D004650 5.8e-47 191.8 223 56.1
Mapoly0082s0085 Marchantia polymorpha HOM05D003606 ORTHO05D004650 1.4e-45 187.2 252 49.6
BcaC06g32566 Brassica carinata HOM05D003606 ORTHO05D004650 7.1e-45 184.9 237 46.4
COL.COLO4_04880 Corchorus olitorius HOM05D003606 ORTHO05D004650 1.2e-44 184.1 161 67.7
BcaNung05838 Brassica carinata HOM05D003606 ORTHO05D004650 1.6e-44 183.7 233 46.8
AagrBONN_evm.TU.Sc2ySwM_344.4930 Anthoceros agrestis HOM05D003606 ORTHO05D004650 2.3e-43 179.9 249 47.8
Pp3c1_35350 Physcomitrium patens HOM05D003606 ORTHO05D004650 4.3e-42 175.6 258 46.5
MCO05G213 Micromonas commoda HOM05D003606 ORTHO05D004650 1.1e-40 171.0 246 45.5
SMO259G0032 Selaginella moellendorffii HOM05D003606 ORTHO05D004650 3.4e-39 166.0 265 36.2
HPP92_026819 Vanilla planifolia HOM05D003606 ORTHO05D004650 3.4e-39 166.0 309 33.3
Oeu060950.1 Olea europaea HOM05D003606 ORTHO05D016710 5.9e-39 165.2 183 48.6
Haze_26363 Corylus avellana HOM05D003606 ORTHO05D004650 3.2e-37 159.5 172 51.2
PRCOL_00003575 Prasinoderma coloniale HOM05D003606 ORTHO05D004650 2.7e-36 156.4 249 43.4
unitig_26.g10141 Utricularia gibba HOM05D003606 ORTHO05D004650 1.1e-32 144.4 275 42.5
CSS0038697 Camellia sinensis var. sinensis HOM05D003606 ORTHO05D016710 3.8e-30 136.0 67 85.1
BcaC01g02187 Brassica carinata HOM05D003606 ORTHO05D016710 2.5e-29 133.3 120 68.3
Ca_22822_v3 Cicer arietinum L. HOM05D003606 ORTHO05D000002 3.6e-28 129.4 69 79.7
C02p14020 Brassica napus HOM05D003606 ORTHO05D016710 1.8e-27 127.1 81 65.4
TAR636G3369 Trochodendron aralioides HOM05D003606 ORTHO05D003127 1.8e-24 117.1 139 46.0
C09p42410 Brassica napus HOM05D003606 ORTHO05D004650 5.3e-24 115.5 154 44.2
BolC9t57121H Brassica oleracea HOM05D003606 ORTHO05D004650 5.3e-24 115.5 154 44.2
SalBow4G2833 Salvia bowleyana HOM05D003606 ORTHO05D004650 4.7e-20 102.4 113 59.3
Sc03g0002540 Simmondsia chinensis HOM05D003606 ORTHO05D004650 4.7e-20 102.4 126 47.6
Cfa026891 Carpinus fangiana HOM05D003606 ORTHO05D004650 6.7e-19 98.6 172 31.4
C09p42400 Brassica napus HOM05D003606 ORTHO05D033191 8.2e-17 91.7 52 86.5
BolC9t57120H Brassica oleracea HOM05D003606 ORTHO05D033191 8.2e-17 91.7 52 86.5
Cre01.g000600 Chlamydomonas reinhardtii HOM05D003606 ORTHO05D004650 4.1e-16 89.4 128 41.4
C03p42670 Brassica napus HOM05D003606 ORTHO05D016710 7.0e-16 88.6 57 63.2
C03p67300 Brassica napus HOM05D003606 ORTHO05D016710 7.0e-16 88.6 57 63.2
BolSC21t60295H Brassica oleracea HOM05D003606 ORTHO05D016710 7.0e-16 88.6 57 63.2
BolC2t06237H Brassica oleracea HOM05D003606 ORTHO05D016710 2.9e-14 83.2 57 61.4
HanXRQChr15g0491881 Helianthus annuus HOM05D003606 ORTHO05D004650 2.5e-13 80.1 38 92.1
BolC2t07520H Brassica oleracea HOM05D003606 ORTHO05D016710 1.2e-12 77.8 47 70.2
CSS0009074 Camellia sinensis var. sinensis HOM05D003606 ORTHO05D043277 2.0e-10 70.5 40 77.5
CSS0037126 Camellia sinensis var. sinensis HOM05D003606 ORTHO05D043277 2.0e-10 70.5 40 77.5
SMO244G0035 Selaginella moellendorffii HOM05D005151 ORTHO05D006322 1.7e-06 57.4 176 24.4
CANSAT51G0014 Cannabis sativa HOM05D003606 ORTHO05D004650 2.9e-06 56.6 26 88.5


User provided reference genes

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