Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p09920 Brassica napus HOM05D006981 ORTHO05D008719 8.1e-67 256.9 128 100.0
BraA10t43072Z Brassica rapa HOM05D006981 ORTHO05D008719 5.3e-66 254.2 128 98.4
BcaC04g20601 Brassica carinata HOM05D006981 ORTHO05D008719 4.6e-62 241.1 126 95.2
C09p41630 Brassica napus HOM05D006981 ORTHO05D008719 1.8e-61 239.2 126 94.4
BolC9t57050H Brassica oleracea HOM05D006981 ORTHO05D008719 4.0e-58 228.0 120 95.0
BcaB08g35575 Brassica carinata HOM05D006981 ORTHO05D008719 4.9e-56 221.1 116 94.0
Thhalv10015042m.g Eutrema salsugineum HOM05D006981 ORTHO05D008719 3.2e-55 218.4 116 92.2
Sp6g14470 Schrenkiella parvula HOM05D006981 ORTHO05D008719 1.3e-53 213.0 115 91.3
Aa31LG3G8600 Aethionema arabicum HOM05D006981 ORTHO05D008719 5.8e-49 197.6 116 82.8
Carub.0008s1231 Capsella rubella HOM05D006981 ORTHO05D008719 8.4e-48 193.7 126 79.4
AL8G26600 Arabidopsis lyrata HOM05D006981 ORTHO05D008719 3.2e-47 191.8 116 84.5
AT5G52220 Arabidopsis thaliana HOM05D006981 ORTHO05D008719 3.2e-47 191.8 116 84.5
THA.LOC104825097 Tarenaya hassleriana HOM05D006981 ORTHO05D008719 1.2e-46 189.9 117 78.6
CARHR265140 Cardamine hirsuta HOM05D006981 ORTHO05D008719 4.6e-46 188.0 116 81.9
Thecc.03G174800 Theobroma cacao HOM05D006981 ORTHO05D008719 3.0e-37 158.7 121 68.6
TWI14G0356 Tripterygium wilfordii HOM05D006981 ORTHO05D008719 2.5e-36 155.6 118 71.2
CDE08G1025 Ceratophyllum demersum HOM05D006981 ORTHO05D008719 4.3e-36 154.8 119 64.7
Duzib084G0697 Durio zibethinus HOM05D006981 ORTHO05D008719 4.3e-36 154.8 122 68.9
Eucgr.K00242 Eucalyptus grandis HOM05D006981 ORTHO05D008719 1.7e-35 152.9 122 64.8
Duzib205G0859 Durio zibethinus HOM05D006981 ORTHO05D008719 2.2e-35 152.5 121 63.6
Manes.06G146000 Manihot esculenta HOM05D006981 ORTHO05D008719 3.7e-35 151.8 119 68.9
Nitab4.5_0019580g0020 Nicotiana tabacum HOM05D006981 ORTHO05D008719 4.8e-35 151.4 127 63.8
vmacro06697 Vaccinium macrocarpon HOM05D006981 ORTHO05D008719 4.8e-35 151.4 120 61.7
GSVIVG01010548001 Vitis vinifera HOM05D006981 ORTHO05D008719 6.3e-35 151.0 119 67.2
SGA_v2.0_scaffold2G01066 Striga asiatica HOM05D006981 ORTHO05D008719 8.2e-35 150.6 121 64.5
Ciclev10006231m.g Citrus clementina HOM05D006981 ORTHO05D008719 1.1e-34 150.2 120 66.7
VMungo0464G1391 Vigna mungo HOM05D006981 ORTHO05D008719 1.1e-34 150.2 120 67.5
COL.COLO4_14290 Corchorus olitorius HOM05D006981 ORTHO05D008719 1.4e-34 149.8 122 64.8
AUR62021209 Chenopodium quinoa HOM05D006981 ORTHO05D008719 1.8e-34 149.4 118 64.4
Gohir.D08G111300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 1.8e-34 149.4 117 65.8
Gorai.004G119200 Gossypium raimondii HOM05D006981 ORTHO05D008719 1.8e-34 149.4 117 65.8
Glyma.09G140600 Glycine max HOM05D006981 ORTHO05D008719 2.4e-34 149.1 115 67.0
Phvul.004G118000 Phaseolus vulgaris HOM05D006981 ORTHO05D008719 3.1e-34 148.7 115 68.7
Ah.13g068510 Amaranthus hybridus HOM05D006981 ORTHO05D008719 4.1e-34 148.3 126 60.3
EL10Ac3g05672 Beta vulgaris HOM05D006981 ORTHO05D008719 4.1e-34 148.3 120 67.5
AUR62016001 Chenopodium quinoa HOM05D006981 ORTHO05D008719 4.1e-34 148.3 118 61.9
MELO3C005381.2 Cucumis melo HOM05D006981 ORTHO05D008719 5.3e-34 147.9 119 63.9
CsaV3_5G005720 Cucumis sativus L. HOM05D006981 ORTHO05D008719 5.3e-34 147.9 119 63.9
CAN.G28.6 Capsicum annuum HOM05D006981 ORTHO05D008719 6.9e-34 147.5 119 63.0
Glyma.16G194500 Glycine max HOM05D006981 ORTHO05D008719 6.9e-34 147.5 115 66.1
Hma1.2p1_0270F.1_g108180 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 6.9e-34 147.5 119 67.2
PGR142G3060 Punica granatum HOM05D006981 ORTHO05D008719 6.9e-34 147.5 122 61.5
Cpa.g.sc107.36 Carica papaya HOM05D006981 ORTHO05D008719 9.1e-34 147.1 127 59.8
Hund11756 Selenicereus undatus HOM05D006981 ORTHO05D008719 1.2e-33 146.7 117 64.1
ClCG01G005500 Citrullus lanatus HOM05D003170 ORTHO05D008719 1.5e-33 146.4 119 63.9
Lj2g0020265 Lotus japonicus HOM05D006981 ORTHO05D008719 1.5e-33 146.4 115 67.0
Nitab4.5_0000080g0060 Nicotiana tabacum HOM05D006981 ORTHO05D008719 1.5e-33 146.4 119 63.9
Sc19g0001580 Simmondsia chinensis HOM05D006981 ORTHO05D008719 2.0e-33 146.0 117 66.7
Solyc06g051300.3 Solanum lycopersicum HOM05D006981 ORTHO05D008719 2.0e-33 146.0 119 61.3
PGSC0003DMG400015647 Solanum tuberosum HOM05D006981 ORTHO05D008719 2.6e-33 145.6 119 61.3
Atru.chr1.479 Acer truncatum HOM05D006981 ORTHO05D008719 3.4e-33 145.2 129 60.5
Manes.09G002400 Manihot esculenta HOM05D006981 ORTHO05D008719 3.4e-33 145.2 119 67.2
Medtr6g471020 Medicago truncatula HOM05D006981 ORTHO05D008719 3.4e-33 145.2 115 67.0
Potri.015G140200 Populus trichocarpa HOM05D006981 ORTHO05D008719 3.4e-33 145.2 132 59.8
CiPaw.03G105000 Carya illinoinensis HOM05D006981 ORTHO05D008719 7.7e-33 144.1 121 62.0
Haze_13729 Corylus avellana HOM05D006981 ORTHO05D008719 7.7e-33 144.1 121 63.6
Sed0011448 Sechium edule HOM05D006981 ORTHO05D008719 7.7e-33 144.1 120 62.5
HanXRQChr08g0209251 Helianthus annuus HOM05D006981 ORTHO05D008719 1.0e-32 143.7 123 60.2
MBI17_g21049_MAGBIO Magnolia biondii HOM05D006981 ORTHO05D008719 1.0e-32 143.7 119 60.5
QL09p014567 Quercus lobata HOM05D006981 ORTHO05D008719 1.0e-32 143.7 119 64.7
Sabra15G0150900 Salix brachista HOM05D006981 ORTHO05D008719 1.0e-32 143.7 126 61.9
TAR375G0811 Trochodendron aralioides HOM05D006981 ORTHO05D008719 1.0e-32 143.7 119 67.2
Cfa008306 Carpinus fangiana HOM05D006981 ORTHO05D008719 1.3e-32 143.3 121 63.6
Gohir.A08G100300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 1.3e-32 143.3 123 63.4
MSTRG.27124 Avicennia marina HOM05D006981 ORTHO05D008719 1.7e-32 142.9 121 62.0
Cc02_g03150 Coffea canephora HOM05D006981 ORTHO05D008719 2.2e-32 142.5 134 57.5
DCAR_009354 Daucus carota HOM05D006981 ORTHO05D008719 2.2e-32 142.5 121 58.7
Migut.F00354 Erythranthe guttata HOM05D006981 ORTHO05D008719 2.2e-32 142.5 128 59.4
Sopen06g017220 Solanum pennellii HOM05D006981 ORTHO05D008719 2.2e-32 142.5 117 60.7
ECA233G5478 Erigeron canadensis HOM05D006981 ORTHO05D008719 3.8e-32 141.7 133 57.1
Nn4g26525 Nelumbo nucifera HOM05D006981 ORTHO05D008719 3.8e-32 141.7 121 61.2
Aqoxy7G00390 Aquilegia oxysepala HOM05D006981 ORTHO05D008719 5.0e-32 141.4 123 56.1
Oeu056238.2 Olea europaea HOM05D006981 ORTHO05D008719 5.0e-32 141.4 121 62.8
Lalb_Chr19g0130931 Lupinus albus HOM05D006981 ORTHO05D008719 6.5e-32 141.0 115 63.5
Zm00001eb309380 Zea mays HOM05D006981 ORTHO05D008719 6.5e-32 141.0 126 58.7
RcHm_v2.0_Chr1g0377021 Rosa chinensis HOM05D006981 ORTHO05D008719 1.1e-31 140.2 115 61.7
SalBow4G2131 Salvia bowleyana HOM05D006981 ORTHO05D008719 1.1e-31 140.2 116 63.8
Ca_25351_v3 Cicer arietinum L. HOM05D000367 ORTHO05D001438 1.4e-31 139.8 115 64.3
Lj1C995G12 Lonicera japonica HOM05D006981 ORTHO05D008719 1.4e-31 139.8 123 59.3
FvH4_7g29270 Fragaria vesca HOM05D006981 ORTHO05D008719 3.2e-31 138.7 115 60.9
FAN03G1713 Fragaria x ananassa HOM05D006981 ORTHO05D008719 3.2e-31 138.7 115 60.9
FAN10G3446 Fragaria x ananassa HOM05D006981 ORTHO05D008719 3.2e-31 138.7 115 60.9
Lsat_1_v5_gn_8_8340 Lactuca sativa HOM05D006981 ORTHO05D008719 3.2e-31 138.7 126 57.9
PSO782G4575 Papaver somniferum HOM05D006981 ORTHO05D008719 3.2e-31 138.7 129 54.3
SalBow4G1422 Salvia bowleyana HOM05D006981 ORTHO05D008719 5.5e-31 137.9 116 62.9
FAN03G1998 Fragaria x ananassa HOM05D006981 ORTHO05D008719 7.2e-31 137.5 115 60.9
Actinidia32871 Actinidia chinensis HOM05D006981 ORTHO05D008719 9.4e-31 137.1 142 51.4
FAN01G2034 Fragaria x ananassa HOM05D006981 ORTHO05D008719 9.4e-31 137.1 115 60.0
arahy.Tifrunner.gnm1.ann1.8WRD93 Arachis hypogaea HOM05D006981 ORTHO05D008719 1.2e-30 136.7 124 60.5
arahy.Tifrunner.gnm1.ann1.T9EWQW Arachis hypogaea HOM05D006981 ORTHO05D008719 1.2e-30 136.7 123 61.0
PSO478G2189 Papaver somniferum HOM05D006981 ORTHO05D008719 1.2e-30 136.7 130 54.6
Prupe.2G292700 Prunus persica HOM05D006981 ORTHO05D008719 1.2e-30 136.7 117 59.0
MD07G1267100 Malus domestica HOM05D006981 ORTHO05D008719 2.1e-30 136.0 119 59.7
HPP92_028124 Vanilla planifolia HOM05D006981 ORTHO05D008719 2.1e-30 136.0 119 59.7
CANSAT21G0349 Cannabis sativa HOM05D006981 ORTHO05D008719 4.7e-30 134.8 115 60.0
CSS0044451 Camellia sinensis var. sinensis HOM05D006981 ORTHO05D008719 1.8e-29 132.9 114 62.3
FAN06G1994 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.8e-29 132.9 115 60.9
unitig_747.g21767 Utricularia gibba HOM05D006981 ORTHO05D008719 1.8e-29 132.9 121 57.0
SHI13798 Sapria himalayana HOM05D006981 ORTHO05D008719 8.8e-29 130.6 159 45.9
HPP92_020865 Vanilla planifolia HOM05D006981 ORTHO05D008719 8.8e-29 130.6 119 57.1
FAN06G2660 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.8e-27 125.6 115 59.1
SMO141G0174 Selaginella moellendorffii HOM05D006981 ORTHO05D008719 5.0e-24 114.8 121 50.4
Manes.14G129556 Manihot esculenta HOM05D006981 ORTHO05D008719 1.6e-22 109.8 73 75.3
Pp3c14_5260 Physcomitrium patens HOM05D006981 ORTHO05D008719 6.1e-22 107.8 128 50.0
AagrBONN_evm.TU.Sc2ySwM_369.83 Anthoceros agrestis HOM05D006981 ORTHO05D008719 3.0e-21 105.5 121 46.3
Peaxi162Scf00040g00323 Petunia axillaris HOM05D006981 ORTHO05D008719 5.2e-21 104.8 119 48.7
Mapoly0027s0013 Marchantia polymorpha HOM05D006981 ORTHO05D008719 1.5e-20 103.2 129 48.1
Actinidia34099 Actinidia chinensis HOM05D006981 ORTHO05D008719 3.1e-18 95.5 72 59.7
Psat1g030600 Pisum sativum HOM05D006981 ORTHO05D008719 1.7e-16 89.7 64 73.4
PRCOL_00004746 Prasinoderma coloniale HOM05D006981 ORTHO05D008719 3.8e-16 88.6 121 39.7
Cre06.g281750 Chlamydomonas reinhardtii HOM05D006981 ORTHO05D008719 6.1e-14 81.3 110 40.9
Hma1.2p1_0270F.1_g108170 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 4.4e-12 75.1 58 63.8
Psat1g030360 Pisum sativum HOM05D006981 ORTHO05D008719 6.3e-11 71.2 58 55.2
SEGI_30853 Sequoiadendron giganteum HOM05D006981 ORTHO05D008719 9.1e-10 67.4 79 49.4
CBR_g4805 Chara braunii HOM05D006981 ORTHO05D008719 3.8e-08 62.0 108 34.3


User provided reference genes

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