Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p09300 Brassica napus HOM05D004547 ORTHO05D005133 1.1e-47 193.0 96 100.0
A10p09340 Brassica napus HOM05D004547 ORTHO05D005133 2.0e-46 188.7 96 99.0
BraA10t43010Z Brassica rapa HOM05D004547 ORTHO05D005133 2.0e-46 188.7 96 99.0
BcaB08g35501 Brassica carinata HOM05D004547 ORTHO05D005133 5.9e-46 187.2 96 97.9
A10p09160 Brassica napus HOM05D004547 ORTHO05D005133 7.7e-46 186.8 96 97.9
A10p09220 Brassica napus HOM05D004547 ORTHO05D005133 1.0e-45 186.4 96 97.9
BraA10t43002Z Brassica rapa HOM05D004547 ORTHO05D005133 1.7e-45 185.7 96 95.8
BcaC04g20676 Brassica carinata HOM05D004547 ORTHO05D005133 8.6e-45 183.3 96 96.9
C09p40720 Brassica napus HOM05D004547 ORTHO05D005133 8.6e-45 183.3 96 96.9
BolC9t56951H Brassica oleracea HOM05D004547 ORTHO05D005133 8.6e-45 183.3 96 96.9
Sp6g13590 Schrenkiella parvula HOM05D004547 ORTHO05D005133 4.2e-44 181.0 96 94.8
Carub.0008s1145 Capsella rubella HOM05D004547 ORTHO05D005133 9.5e-44 179.9 96 93.8
Thhalv10012691m.g Eutrema salsugineum HOM05D004547 ORTHO05D005133 1.2e-43 179.5 96 93.8
BcaC03g14608 Brassica carinata HOM05D004547 ORTHO05D005133 2.1e-43 178.7 96 93.8
A02p12350 Brassica napus HOM05D004547 ORTHO05D005133 2.1e-43 178.7 96 93.8
BolC2t08183H Brassica oleracea HOM05D004547 ORTHO05D005133 2.1e-43 178.7 96 93.8
AL8G25720 Arabidopsis lyrata HOM05D004547 ORTHO05D005133 4.7e-43 177.6 96 91.7
C02p20480 Brassica napus HOM05D004547 ORTHO05D005133 6.1e-43 177.2 95 92.6
AT5G51430 Arabidopsis thaliana HOM05D004547 ORTHO05D005133 5.2e-42 174.1 96 91.7
CARHR264160 Cardamine hirsuta HOM05D004547 ORTHO05D005133 5.2e-42 174.1 96 91.7
Aa31sc202G10 Aethionema arabicum HOM05D004547 ORTHO05D005133 1.2e-41 172.9 96 89.6
COL.COLO4_14121 Corchorus olitorius HOM05D004547 ORTHO05D005133 1.8e-39 165.6 95 83.2
Duzib205G1908 Durio zibethinus HOM05D004547 ORTHO05D005133 1.8e-39 165.6 95 83.2
Manes.06G134600 Manihot esculenta HOM05D004547 ORTHO05D005133 3.2e-39 164.9 96 84.4
TWI39G0203 Tripterygium wilfordii HOM05D004547 ORTHO05D005133 3.2e-39 164.9 96 83.3
THA.LOC104811522 Tarenaya hassleriana HOM05D004547 ORTHO05D005133 4.1e-39 164.5 96 84.4
Thecc.03G155600 Theobroma cacao HOM05D004547 ORTHO05D005133 4.1e-39 164.5 95 82.1
Prupe.2G277000 Prunus persica HOM05D004547 ORTHO05D005133 9.2e-39 163.3 96 81.2
QL09p005748 Quercus lobata HOM05D004547 ORTHO05D005133 9.2e-39 163.3 95 82.1
Glyma.09G224000 Glycine max HOM05D004547 ORTHO05D005133 1.2e-38 162.9 95 81.1
Glyma.12G013000 Glycine max HOM05D004547 ORTHO05D005133 1.2e-38 162.9 95 81.1
Lj3g0004511 Lotus japonicus HOM05D004547 ORTHO05D005133 1.2e-38 162.9 95 82.1
FvH4_7g27490 Fragaria vesca HOM05D004547 ORTHO05D005133 2.0e-38 162.2 96 80.2
FAN01G0567 Fragaria x ananassa HOM05D004547 ORTHO05D005133 2.0e-38 162.2 96 80.2
FAN03G1184 Fragaria x ananassa HOM05D004547 ORTHO05D005133 2.0e-38 162.2 96 80.2
Gohir.D12G200900 Gossypium hirsutum HOM05D004547 ORTHO05D005133 2.0e-38 162.2 96 82.3
Gorai.008G216000 Gossypium raimondii HOM05D004547 ORTHO05D005133 2.0e-38 162.2 96 82.3
Lj1A979T84 Lonicera japonica HOM05D004547 ORTHO05D005133 2.7e-38 161.8 95 80.0
CiPaw.03G093300 Carya illinoinensis HOM05D004547 ORTHO05D005133 3.5e-38 161.4 96 81.2
FAN06G1879 Fragaria x ananassa HOM05D004547 ORTHO05D005133 3.5e-38 161.4 96 80.2
Cpa.g.sc3.324 Carica papaya HOM05D004547 ORTHO05D005133 4.5e-38 161.0 96 80.2
Gohir.A12G198300 Gossypium hirsutum HOM05D004547 ORTHO05D005133 4.5e-38 161.0 96 81.2
MD01G1182800 Malus domestica HOM05D004547 ORTHO05D005133 5.9e-38 160.6 96 84.4
Eucgr.A02893 Eucalyptus grandis HOM05D004547 ORTHO05D005133 7.8e-38 160.2 96 80.2
Phvul.011G016000 Phaseolus vulgaris HOM05D004547 ORTHO05D005133 7.8e-38 160.2 95 78.9
RcHm_v2.0_Chr1g0374281 Rosa chinensis HOM05D004547 ORTHO05D005133 7.8e-38 160.2 96 80.2
Sopen05g002910 Solanum pennellii HOM05D004547 ORTHO05D005133 7.8e-38 160.2 96 81.2
PGSC0003DMG400017618 Solanum tuberosum HOM05D004547 ORTHO05D005133 7.8e-38 160.2 96 81.2
Nitab4.5_0000895g0220 Nicotiana tabacum HOM05D004547 ORTHO05D005133 1.0e-37 159.8 95 81.1
Potri.003G109100 Populus trichocarpa HOM05D004547 ORTHO05D005133 1.0e-37 159.8 96 80.2
GSVIVG01018659001 Vitis vinifera HOM05D004547 ORTHO05D005133 1.3e-37 159.5 96 79.2
Nitab4.5_0004665g0060 Nicotiana tabacum HOM05D004547 ORTHO05D005133 1.7e-37 159.1 96 80.2
VMungo1127G1242 Vigna mungo HOM05D004547 ORTHO05D005133 1.7e-37 159.1 95 78.9
CSS0028755 Camellia sinensis var. sinensis HOM05D004547 ORTHO05D005133 2.9e-37 158.3 95 78.9
Ciclev10004313m.g Citrus clementina HOM05D004547 ORTHO05D005133 2.9e-37 158.3 96 79.2
Cc02_g04280 Coffea canephora HOM05D004547 ORTHO05D005133 3.9e-37 157.9 97 79.4
CANSAT56G3837 Cannabis sativa HOM05D004547 ORTHO05D005133 5.0e-37 157.5 97 82.5
Atru.chr1.728 Acer truncatum HOM05D004547 ORTHO05D005133 8.6e-37 156.8 96 78.1
PGR042G2008 Punica granatum HOM05D004547 ORTHO05D005133 8.6e-37 156.8 96 78.1
Peaxi162Scf00023g01214 Petunia axillaris HOM05D004547 ORTHO05D005133 1.1e-36 156.4 96 80.2
Actinidia31780 Actinidia chinensis HOM05D004547 ORTHO05D005133 1.5e-36 156.0 95 76.8
EL10Ac2g04890 Beta vulgaris HOM05D004547 ORTHO05D005133 1.5e-36 156.0 95 74.7
Ah.10g036230 Amaranthus hybridus HOM05D004547 ORTHO05D005133 1.9e-36 155.6 95 75.8
Sabra03G0075600 Salix brachista HOM05D004547 ORTHO05D005133 2.5e-36 155.2 96 77.1
Dinv28576 Davidia involucrata HOM05D004547 ORTHO05D005133 3.3e-36 154.8 95 76.8
Hma1.2p1_0432F.1_g151760 Hydrangea macrophylla HOM05D004547 ORTHO05D005133 3.3e-36 154.8 95 75.8
DCAR_020189 Daucus carota HOM05D004547 ORTHO05D005133 4.3e-36 154.5 96 77.1
PSO266G0090 Papaver somniferum HOM05D004547 ORTHO05D005133 4.3e-36 154.5 96 80.2
TPR.G20262 Trifolium pratense HOM05D004547 ORTHO05D005133 4.3e-36 154.5 95 76.8
AUR62022938 Chenopodium quinoa HOM05D004547 ORTHO05D005133 5.6e-36 154.1 95 74.7
SalBow5G1900 Salvia bowleyana HOM05D004547 ORTHO05D005133 7.3e-36 153.7 96 77.1
Lalb_Chr03g0024271 Lupinus albus HOM05D004547 ORTHO05D005133 9.5e-36 153.3 95 78.9
Oeu022486.1 Olea europaea HOM05D004547 ORTHO05D005133 9.5e-36 153.3 96 76.0
AUR62012299 Chenopodium quinoa HOM05D004547 ORTHO05D005133 1.2e-35 152.9 95 73.7
PSO384G4058 Papaver somniferum HOM05D004547 ORTHO05D005133 1.2e-35 152.9 96 80.2
Psat0s2825g0040 Pisum sativum HOM05D004547 ORTHO05D005133 1.2e-35 152.9 95 76.8
SalBow5G5604 Salvia bowleyana HOM05D004547 ORTHO05D005133 1.6e-35 152.5 96 76.0
Sc14g0005530 Simmondsia chinensis HOM05D004547 ORTHO05D005133 1.6e-35 152.5 95 76.8
TAR374G0871 Trochodendron aralioides HOM05D004547 ORTHO05D005133 2.1e-35 152.1 95 74.7
Lsat_1_v5_gn_9_52061 Lactuca sativa HOM05D004547 ORTHO05D005133 3.6e-35 151.4 96 79.2
MSTRG.8826 Avicennia marina HOM05D004547 ORTHO05D005133 4.7e-35 151.0 96 75.0
ECA232G2122 Erigeron canadensis HOM05D004547 ORTHO05D005133 4.7e-35 151.0 96 78.1
TAR375G0699 Trochodendron aralioides HOM05D004547 ORTHO05D005133 4.7e-35 151.0 95 73.7
Medtr0004s0490 Medicago truncatula HOM05D004547 ORTHO05D005133 8.0e-35 150.2 95 74.7
Cfa008167 Carpinus fangiana HOM05D004547 ORTHO05D005133 1.0e-34 149.8 96 76.0
Medtr6g005670 Medicago truncatula HOM05D004547 ORTHO05D005133 1.0e-34 149.8 95 73.7
vmacro06799 Vaccinium macrocarpon HOM05D004547 ORTHO05D005133 1.0e-34 149.8 91 78.0
Ca_19628_v3 Cicer arietinum L. HOM05D004547 ORTHO05D005133 1.4e-34 149.4 96 76.0
HanXRQChr16g0512771 Helianthus annuus HOM05D004547 ORTHO05D005133 1.8e-34 149.1 96 77.1
ATR0317G078 Amborella trichopoda HOM05D004547 ORTHO05D005133 2.3e-34 148.7 96 74.0
Rhsim03G0167200 Rhododendron simsii HOM05D004547 ORTHO05D005133 2.3e-34 148.7 95 72.6
Migut.F00479 Erythranthe guttata HOM05D004547 ORTHO05D005133 4.0e-34 147.9 96 75.0
Medtr6g005610 Medicago truncatula HOM05D004547 ORTHO05D005133 4.0e-34 147.9 95 72.6
Aqoxy2G03231 Aquilegia oxysepala HOM05D004547 ORTHO05D005133 5.2e-34 147.5 96 72.9
arahy.Tifrunner.gnm1.ann1.J7T2TK Arachis hypogaea HOM05D004547 ORTHO05D005133 6.8e-34 147.1 95 77.9
arahy.Tifrunner.gnm1.ann1.TL2CDN Arachis hypogaea HOM05D004547 ORTHO05D005133 6.8e-34 147.1 95 77.9
MELO3C006811.2 Cucumis melo HOM05D004547 ORTHO05D005133 1.2e-33 146.4 96 72.9
CsaV3_3G016130 Cucumis sativus L. HOM05D004547 ORTHO05D005133 1.5e-33 146.0 96 74.0
Sed0001089 Sechium edule HOM05D004547 ORTHO05D005133 2.0e-33 145.6 96 72.9
Sed0008837 Sechium edule HOM05D004547 ORTHO05D005133 3.4e-33 144.8 96 74.0
SEGI_24302 Sequoiadendron giganteum HOM05D004547 ORTHO05D005133 9.8e-33 143.3 96 72.9
SGA_v2.0_scaffold44G16547 Striga asiatica HOM05D004547 ORTHO05D005133 9.8e-33 143.3 94 72.3
Zm00001eb389950 Zea mays HOM05D004547 ORTHO05D005133 1.3e-32 142.9 96 68.8
Nn1g01023 Nelumbo nucifera HOM05D004547 ORTHO05D005133 2.9e-32 141.7 95 71.6
unitig_37.g11930 Utricularia gibba HOM05D004547 ORTHO05D005133 1.9e-31 139.0 96 67.7
Oeu042559.1 Olea europaea HOM05D004547 ORTHO05D005133 3.2e-31 138.3 92 70.7
AagrBONN_evm.TU.Sc2ySwM_117.1032 Anthoceros agrestis HOM05D004547 ORTHO05D005133 5.0e-29 131.0 92 67.4
ClCG05G007360 Citrullus lanatus HOM05D004547 ORTHO05D005133 8.6e-29 130.2 89 71.9
MD07G1253600 Malus domestica HOM05D004547 ORTHO05D005133 1.1e-28 129.8 86 76.7
CAN.G16.15 Capsicum annuum HOM05D004547 ORTHO05D005133 1.2e-27 126.3 85 71.8
CARHR150020 Cardamine hirsuta HOM05D004547 ORTHO05D005133 1.2e-27 126.3 94 72.3
Mapoly0007s0274 Marchantia polymorpha HOM05D004547 ORTHO05D005133 6.8e-26 120.6 96 60.4
CDE04G0650 Ceratophyllum demersum HOM05D004547 ORTHO05D005133 1.3e-24 116.3 92 63.0
Pp3c7_60 Physcomitrium patens HOM05D004547 ORTHO05D005133 8.3e-24 113.6 95 60.0
SMO134G0015 Selaginella moellendorffii HOM05D004547 ORTHO05D005133 3.2e-23 111.7 92 58.7
HPP92_005318 Vanilla planifolia HOM05D004547 ORTHO05D005133 8.6e-21 103.6 71 69.0
CBR_g31542 Chara braunii HOM05D004547 ORTHO05D005133 9.5e-20 100.1 112 50.0
Hund13892 Selenicereus undatus HOM05D004547 ORTHO05D005133 4.9e-16 87.8 49 89.8
PRCOL_00005609 Prasinoderma coloniale HOM05D004547 ORTHO05D005133 2.1e-06 55.8 93 32.3


User provided reference genes

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