Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p09270 Brassica napus HOM05D008756 ORTHO05D003415 4.1e-27 124.0 64 100.0
BraA10t43000Z Brassica rapa HOM05D008756 ORTHO05D003415 5.4e-27 123.6 64 98.4
BraA10t43004Z Brassica rapa HOM05D008756 ORTHO05D003415 5.4e-27 123.6 64 98.4
A10p30190 Brassica napus HOM05D008756 ORTHO05D003415 3.5e-26 120.9 64 96.9
C09p70600 Brassica napus HOM05D008756 ORTHO05D003415 3.5e-26 120.9 64 96.9
BraA10t45057Z Brassica rapa HOM05D008756 ORTHO05D003415 3.5e-26 120.9 64 96.9
BraA10t43008Z Brassica rapa HOM05D008756 ORTHO05D003415 5.9e-26 120.2 64 96.9
A10p09190 Brassica napus HOM05D008756 ORTHO05D003415 1.0e-25 119.4 64 96.9
A10p09330 Brassica napus HOM05D008756 ORTHO05D003415 1.0e-22 109.4 63 85.7
BolC9t59806H Brassica oleracea HOM05D008756 ORTHO05D003415 3.4e-21 104.4 60 88.3
BolC9t59813H Brassica oleracea HOM05D008756 ORTHO05D003415 4.4e-21 104.0 63 84.1
BcaC06g32337 Brassica carinata HOM05D008756 ORTHO05D003415 7.5e-21 103.2 63 82.5
BolC9t59816H Brassica oleracea HOM05D008756 ORTHO05D003415 1.3e-20 102.4 63 82.5
BolC9t59818H Brassica oleracea HOM05D008756 ORTHO05D003415 1.7e-20 102.1 63 81.0
BolC9t59804H Brassica oleracea HOM05D008756 ORTHO05D003415 7.0e-19 96.7 63 77.8
BraA10t45055Z Brassica rapa HOM05D008756 ORTHO05D003415 1.2e-18 95.9 67 76.1
BcaC06g32356 Brassica carinata HOM05D008756 ORTHO05D003415 2.7e-18 94.7 64 82.8
BolC9t59814H Brassica oleracea HOM05D008756 ORTHO05D003415 1.0e-17 92.8 56 83.9
CARHR206980 Cardamine hirsuta HOM05D008756 ORTHO05D003415 1.3e-17 92.4 64 75.0
Sp6g36600 Schrenkiella parvula HOM05D008756 ORTHO05D003415 8.6e-17 89.7 64 73.4
BcaNung05843 Brassica carinata HOM05D008756 ORTHO05D003415 5.6e-16 87.0 58 79.3
BcaNung05844 Brassica carinata HOM05D008756 ORTHO05D003415 5.6e-16 87.0 58 79.3
Carub.0006s0515 Capsella rubella HOM05D008756 ORTHO05D003415 5.6e-16 87.0 64 75.0
AL6G16290 Arabidopsis lyrata HOM05D008756 ORTHO05D003415 1.2e-15 85.9 64 73.4
Aa31sc52G60 Aethionema arabicum HOM05D008756 ORTHO05D003415 2.1e-15 85.1 64 68.8
AT5G06265 Arabidopsis thaliana HOM05D008756 ORTHO05D003415 1.0e-14 82.8 64 71.9
A10p30210 Brassica napus HOM05D008756 ORTHO05D003415 3.1e-14 81.3 64 67.2
A10p09210 Brassica napus HOM05D008756 ORTHO05D003415 1.5e-13 79.0 45 88.9
A10p09290 Brassica napus HOM05D008756 ORTHO05D003415 5.8e-13 77.0 45 86.7
THA.LOC104826814 Tarenaya hassleriana HOM05D003660 ORTHO05D003415 1.1e-11 72.8 62 59.7
C09p70620 Brassica napus HOM05D008756 ORTHO05D003415 3.2e-11 71.2 64 60.9
BraA10t45059Z Brassica rapa HOM05D008756 ORTHO05D003415 3.2e-11 71.2 64 60.9
A10p30170 Brassica napus HOM05D008756 ORTHO05D000925 5.6e-08 60.5 41 78.0
C09p70580 Brassica napus HOM05D008756 ORTHO05D000925 1.2e-07 59.3 41 75.6
Sed0020241 Sechium edule HOM05D003660 ORTHO05D003415 2.8e-07 58.2 64 51.6
CANSAT64G0684 Cannabis sativa HOM05D003660 ORTHO05D003415 1.4e-06 55.8 66 50.0
CiPaw.10G014700 Carya illinoinensis HOM05D003660 ORTHO05D003415 1.4e-06 55.8 66 51.5
MD14G1033900 Malus domestica HOM05D003660 ORTHO05D003415 3.1e-06 54.7 66 48.5
ClCG10G018570 Citrullus lanatus HOM05D003660 ORTHO05D003415 4.0e-06 54.3 64 48.4


User provided reference genes

Program Settings