Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p09180 Brassica napus HOM05D012344 ORTHO05D014513 6.5e-100 367.5 195 100.0
A10p09320 Brassica napus HOM05D012344 ORTHO05D014513 7.0e-86 320.9 195 90.3
BraA10t43003Z Brassica rapa HOM05D012344 ORTHO05D014513 7.0e-86 320.9 195 89.7
C09p70590 Brassica napus HOM05D012344 ORTHO05D014513 3.8e-84 315.1 195 87.7
BraA10t45056Z Brassica rapa HOM05D012344 ORTHO05D014513 3.8e-84 315.1 195 87.7
A10p30180 Brassica napus HOM05D012344 ORTHO05D014513 1.5e-83 313.2 195 87.2
A10p09260 Brassica napus HOM05D012344 ORTHO05D014513 4.0e-73 278.5 200 81.0
A10p09240 Brassica napus HOM05D012344 ORTHO05D014513 2.4e-46 189.5 97 97.9
A10p09250 Brassica napus HOM05D012344 ORTHO05D014513 2.4e-46 189.5 97 97.9
BolC9t59807H Brassica oleracea HOM05D012344 ORTHO05D014513 8.9e-41 171.0 98 91.8
BolC9t59812H Brassica oleracea HOM05D012344 ORTHO05D014513 8.9e-41 171.0 98 91.8
BolC9t59803H Brassica oleracea HOM05D012344 ORTHO05D014513 5.8e-40 168.3 98 90.8
BcaNung05841 Brassica carinata HOM05D012344 ORTHO05D014513 2.9e-23 112.8 69 85.5
BcaC06g32357 Brassica carinata HOM05D008733 ORTHO05D010810 6.2e-18 95.1 123 52.0
BcaC06g32569 Brassica carinata HOM05D008733 ORTHO05D010810 1.4e-17 94.0 123 51.2
BcaC06g32568 Brassica carinata HOM05D008733 ORTHO05D010810 5.3e-17 92.0 123 50.4
C09p70280 Brassica napus HOM05D008733 ORTHO05D010810 7.6e-16 88.2 143 44.8
BolC9t59772H Brassica oleracea HOM05D008733 ORTHO05D010810 7.6e-16 88.2 143 44.8
C09p70310 Brassica napus HOM05D008733 ORTHO05D010810 2.9e-15 86.3 143 44.1
BolC9t59776H Brassica oleracea HOM05D008733 ORTHO05D010810 2.9e-15 86.3 143 44.1
A10p30160 Brassica napus HOM05D008733 ORTHO05D010810 1.2e-13 80.9 90 57.8
C09p70570 Brassica napus HOM05D008733 ORTHO05D010810 1.2e-13 80.9 90 57.8
BraA10t45054Z Brassica rapa HOM05D008733 ORTHO05D010810 1.2e-13 80.9 90 57.8
A10p29910 Brassica napus HOM05D008733 ORTHO05D010810 4.6e-13 79.0 92 55.4
BolC9t59802H Brassica oleracea HOM05D008733 ORTHO05D010810 4.6e-13 79.0 91 56.0
BraA10t45030Z Brassica rapa HOM05D008733 ORTHO05D010810 4.6e-13 79.0 92 55.4
BcaC06g32344 Brassica carinata HOM05D008733 ORTHO05D010810 1.8e-12 77.0 91 54.9
Thhalv10016044m.g Eutrema salsugineum HOM05D000307 ORTHO05D010810 1.8e-12 77.0 143 39.9
C09p71930 Brassica napus HOM05D030936 ORTHO05D027891 3.9e-12 75.9 112 45.5
A10p31290 Brassica napus HOM05D030936 ORTHO05D027891 1.9e-11 73.6 114 41.2
BcaC06g32343 Brassica carinata HOM05D008733 ORTHO05D010810 2.5e-11 73.2 90 54.4
Sp6g36360 Schrenkiella parvula HOM05D008733 ORTHO05D010810 3.3e-11 72.8 141 39.7
A10p09280 Brassica napus HOM05D008733 ORTHO05D010810 2.1e-10 70.1 90 53.3
BcaC06g32338 Brassica carinata HOM05D008733 ORTHO05D010810 4.8e-10 68.9 90 53.3
BcaC06g32339 Brassica carinata HOM05D008733 ORTHO05D010810 4.8e-10 68.9 90 53.3
BcaC06g32342 Brassica carinata HOM05D008733 ORTHO05D010810 4.8e-10 68.9 90 53.3
A10p09200 Brassica napus HOM05D008733 ORTHO05D010810 4.8e-10 68.9 90 53.3
BolC9t59774H Brassica oleracea HOM05D008733 ORTHO05D010810 4.8e-10 68.9 45 80.0
BolC9t59805H Brassica oleracea HOM05D008733 ORTHO05D010810 4.8e-10 68.9 90 53.3
BolC9t59810H Brassica oleracea HOM05D008733 ORTHO05D010810 4.8e-10 68.9 90 53.3
BolC9t59817H Brassica oleracea HOM05D008733 ORTHO05D010810 6.2e-10 68.6 90 52.2
C09p70610 Brassica napus HOM05D008733 ORTHO05D010810 2.4e-09 66.6 90 51.1
BraA10t43005Z Brassica rapa HOM05D008733 ORTHO05D010810 2.4e-09 66.6 90 51.1
BraA10t45058Z Brassica rapa HOM05D008733 ORTHO05D010810 2.4e-09 66.6 90 51.1
BraA10t43009Z Brassica rapa HOM05D008733 ORTHO05D010810 6.9e-09 65.1 90 52.2
BcaB05g21666 Brassica carinata HOM05D008733 ORTHO05D010810 2.6e-08 63.2 141 36.2
BcaC03g13165 Brassica carinata HOM05D000307 ORTHO05D000166 3.4e-08 62.8 145 32.4
C02p02730 Brassica napus HOM05D000307 ORTHO05D000166 3.4e-08 62.8 145 32.4
BolC2t06238H Brassica oleracea HOM05D000307 ORTHO05D000166 3.4e-08 62.8 145 32.4
BraA10t43001Z Brassica rapa HOM05D008733 ORTHO05D010810 3.4e-08 62.8 90 48.9
BcaC06g32410 Brassica carinata HOM05D008733 ORTHO05D024404 5.8e-08 62.0 106 45.3
C09p69800 Brassica napus HOM05D008733 ORTHO05D024404 5.8e-08 62.0 106 45.3
BolC9t59724H Brassica oleracea HOM05D008733 ORTHO05D024404 5.8e-08 62.0 106 45.3
BolC9t59815H Brassica oleracea HOM05D012344 ORTHO05D014513 1.3e-07 60.8 31 96.8
BcaNung05840 Brassica carinata HOM05D008733 ORTHO05D010810 6.5e-07 58.5 39 82.1
A10p29420 Brassica napus HOM05D008733 ORTHO05D024404 1.1e-06 57.8 102 43.1
BraA02t04882Z Brassica rapa HOM05D000307 ORTHO05D000166 3.2e-06 56.2 145 30.3
BraA10t44986Z Brassica rapa HOM05D008733 ORTHO05D024404 4.2e-06 55.8 102 42.2


User provided reference genes

Program Settings