Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p08800 Brassica napus HOM05D000743 ORTHO05D000580 3.7e-20 100.5 49 100.0
BraSC37t46124Z Brassica rapa HOM05D000743 ORTHO05D000580 3.7e-20 100.5 49 100.0
Aa31sc2803G10 Aethionema arabicum HOM05D000743 ORTHO05D000580 6.6e-09 63.2 40 77.5
BcaC05g26872 Brassica carinata HOM05D000743 ORTHO05D000580 6.6e-09 63.2 40 77.5
BcaC08g43718 Brassica carinata HOM05D000743 ORTHO05D000580 6.6e-09 63.2 40 77.5
BNapus_Darmor_BZH_scaffold_234p00150 Brassica napus HOM05D000743 ORTHO05D000580 6.6e-09 63.2 40 77.5
C04p19640 Brassica napus HOM05D000743 ORTHO05D000580 6.6e-09 63.2 40 77.5
BolC4t23499H Brassica oleracea HOM05D000743 ORTHO05D000580 6.6e-09 63.2 40 77.5
BolSC28t60351H Brassica oleracea HOM05D000743 ORTHO05D000580 6.6e-09 63.2 40 77.5
BraSC48t46275Z Brassica rapa HOM05D000743 ORTHO05D000580 6.6e-09 63.2 40 77.5
BraSC77t46655Z Brassica rapa HOM05D000743 ORTHO05D000580 6.6e-09 63.2 40 77.5
CARHR283420 Cardamine hirsuta HOM05D000743 ORTHO05D000580 6.6e-09 63.2 40 77.5
Sp3g25910 Schrenkiella parvula HOM05D000743 ORTHO05D000580 6.6e-09 63.2 40 77.5
AT2G07698 Arabidopsis thaliana HOM05D000743 ORTHO05D000580 1.5e-08 62.0 40 75.0
ATMG01190 Arabidopsis thaliana HOM05D000743 ORTHO05D000580 1.5e-08 62.0 40 75.0
SHI39077 Sapria himalayana HOM05D000743 ORTHO05D000580 1.5e-08 62.0 40 75.0
SHI49632 Sapria himalayana HOM05D000743 ORTHO05D000580 1.5e-08 62.0 40 72.5
SHI36077 Sapria himalayana HOM05D000743 ORTHO05D000580 1.9e-08 61.6 41 70.7
SHI46272 Sapria himalayana HOM05D000743 ORTHO05D000580 1.9e-08 61.6 40 75.0
BolC9t57492H Brassica oleracea HOM05D000743 ORTHO05D000580 2.5e-08 61.2 40 75.0
AUR62034209 Chenopodium quinoa HOM05D000743 ORTHO05D000580 3.3e-08 60.8 40 72.5
Lsat_1_v5_gn_5_138100 Lactuca sativa HOM05D000743 ORTHO05D000580 3.3e-08 60.8 40 72.5
SHI35236 Sapria himalayana HOM05D000743 ORTHO05D000580 3.3e-08 60.8 40 72.5
SHI46361 Sapria himalayana HOM05D000743 ORTHO05D000580 3.3e-08 60.8 29 96.6
arahy.Tifrunner.gnm1.ann1.4E2K1J Arachis hypogaea HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
arahy.Tifrunner.gnm1.ann1.4R8S2X Arachis hypogaea HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
arahy.Tifrunner.gnm1.ann1.NM4EZ4 Arachis hypogaea HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
arahy.Tifrunner.gnm1.ann1.YBNI57 Arachis hypogaea HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
EL10Ac5g11445 Beta vulgaris HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
CANSAT16G0054 Cannabis sativa HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
CDE02G1641 Ceratophyllum demersum HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
CDE02G3004 Ceratophyllum demersum HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
AUR62042354 Chenopodium quinoa HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
AUR62043788 Chenopodium quinoa HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
AUR62043899 Chenopodium quinoa HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
Ca_17162_v3 Cicer arietinum L. HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
CsaV3_UNG210320 Cucumis sativus L. HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
ECA039G0013 Erigeron canadensis HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
Gorai.013G213000 Gossypium raimondii HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
HanXRQChr00c0055g0571381 Helianthus annuus HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
HanXRQMTg0579551 Helianthus annuus HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
Hma1.2p1_0547F.1_g176650 Hydrangea macrophylla HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
Lsat_1_v5_gn_0_17620 Lactuca sativa HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
Lsat_1_v5_gn_0_38060 Lactuca sativa HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
Lsat_1_v5_gn_1_2921 Lactuca sativa HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
Lsat_1_v5_gn_5_148960 Lactuca sativa HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
Lsat_1_v5_gn_5_181820 Lactuca sativa HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
Lsat_1_v5_gn_9_53101 Lactuca sativa HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
LjContig00439g0018024 Lotus japonicus HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
Medtr0212s0040 Medicago truncatula HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
Nn003s41390 Nelumbo nucifera HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
Nn044s41816 Nelumbo nucifera HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
Nn1g09935 Nelumbo nucifera HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
Nn1g10007 Nelumbo nucifera HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
Nn1g10146 Nelumbo nucifera HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
Psat7g138400 Pisum sativum HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
Potri.007G062242 Populus trichocarpa HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
PGR028G0002 Punica granatum HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
SabraMtG0010000 Salix brachista HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
SHI35290 Sapria himalayana HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
SHI38845 Sapria himalayana HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
SHI45577 Sapria himalayana HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
SHI50288 Sapria himalayana HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
Hund12892 Selenicereus undatus HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
Hund28637 Selenicereus undatus HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
Hund28902 Selenicereus undatus HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
Hund29815 Selenicereus undatus HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
Hund30932 Selenicereus undatus HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
Sc11g0004370 Simmondsia chinensis HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
TAR477G0001 Trochodendron aralioides HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
TAR628G1600 Trochodendron aralioides HOM05D000743 ORTHO05D000580 4.3e-08 60.5 40 72.5
Lsat_1_v5_gn_0_43360 Lactuca sativa HOM05D000743 ORTHO05D000580 5.6e-08 60.1 40 72.5
Aa31csc464G20 Aethionema arabicum HOM05D000743 ORTHO05D000580 7.3e-08 59.7 38 76.3
HanXRQChr01g0003491 Helianthus annuus HOM05D000743 ORTHO05D000580 9.5e-08 59.3 40 70.0
HanXRQChr14g0434331 Helianthus annuus HOM05D000743 ORTHO05D000580 9.5e-08 59.3 29 93.1
Lsat_1_v5_gn_2_51020 Lactuca sativa HOM05D000580 ORTHO05D001362 9.5e-08 59.3 29 93.1
Lalb_Chr00c29g0408021 Lupinus albus HOM05D000743 ORTHO05D000580 9.5e-08 59.3 40 70.0
Nitab4.5_0001788g0060 Nicotiana tabacum HOM05D000743 ORTHO05D000580 9.5e-08 59.3 40 70.0
QL06p018440 Quercus lobata HOM05D000743 ORTHO05D000580 9.5e-08 59.3 29 93.1
SHI35977 Sapria himalayana HOM05D000743 ORTHO05D000580 9.5e-08 59.3 40 70.0
SHI36137 Sapria himalayana HOM05D000743 ORTHO05D000580 9.5e-08 59.3 29 93.1
SHI37066 Sapria himalayana HOM05D000743 ORTHO05D000580 9.5e-08 59.3 29 93.1
SHI38032 Sapria himalayana HOM05D000743 ORTHO05D000580 9.5e-08 59.3 40 70.0
SHI38101 Sapria himalayana HOM05D000743 ORTHO05D000580 9.5e-08 59.3 40 70.0
SHI38900 Sapria himalayana HOM05D000743 ORTHO05D000580 9.5e-08 59.3 29 93.1
SHI43389 Sapria himalayana HOM05D000743 ORTHO05D000580 9.5e-08 59.3 29 93.1
Zm00001eb434640 Zea mays HOM05D000743 ORTHO05D000580 9.5e-08 59.3 40 70.0
Zm00001eb436190 Zea mays HOM05D000743 ORTHO05D000580 9.5e-08 59.3 40 70.0
Zm00001eb436240 Zea mays HOM05D000743 ORTHO05D000580 9.5e-08 59.3 40 70.0
Zm00001eb436300 Zea mays HOM05D000743 ORTHO05D000580 9.5e-08 59.3 40 70.0
Zm00001eb436340 Zea mays HOM05D000743 ORTHO05D000580 9.5e-08 59.3 40 70.0
Zm00001eb436480 Zea mays HOM05D000743 ORTHO05D000580 9.5e-08 59.3 40 70.0
Zm00001eb437040 Zea mays HOM05D000743 ORTHO05D000580 9.5e-08 59.3 40 70.0
Zm00001eb437490 Zea mays HOM05D000743 ORTHO05D000580 9.5e-08 59.3 40 70.0
Zm00001eb437510 Zea mays HOM05D000743 ORTHO05D000580 9.5e-08 59.3 40 70.0
Zm00001eb441850 Zea mays HOM05D000743 ORTHO05D000580 9.5e-08 59.3 40 70.0
Zm00001eb442490 Zea mays HOM05D000743 ORTHO05D000580 9.5e-08 59.3 40 70.0
Zm00001eb442780 Zea mays HOM05D000743 ORTHO05D000580 9.5e-08 59.3 40 70.0
Zm00001eb442880 Zea mays HOM05D000743 ORTHO05D000580 9.5e-08 59.3 40 70.0
Ah.10g028530 Amaranthus hybridus HOM05D000743 ORTHO05D000580 1.2e-07 58.9 40 70.0
Aqoxy4G01617 Aquilegia oxysepala HOM05D000743 ORTHO05D000580 1.2e-07 58.9 40 70.0
MELO3C020639.2 Cucumis melo HOM05D000743 ORTHO05D000580 1.2e-07 58.9 40 70.0
Lj2A1231T102 Lonicera japonica HOM05D000743 ORTHO05D000580 1.2e-07 58.9 40 70.0
Lj2C1236T50 Lonicera japonica HOM05D000743 ORTHO05D000580 1.2e-07 58.9 40 70.0
Lj2P1232T89 Lonicera japonica HOM05D000743 ORTHO05D000580 1.2e-07 58.9 40 70.0
SHI34625 Sapria himalayana HOM05D000743 ORTHO05D000580 1.2e-07 58.9 40 70.0
SHI35978 Sapria himalayana HOM05D000743 ORTHO05D000580 1.2e-07 58.9 40 70.0
SHI37137 Sapria himalayana HOM05D000743 ORTHO05D000580 1.2e-07 58.9 40 67.5
SHI37900 Sapria himalayana HOM05D001560 ORTHO05D003613 1.2e-07 58.9 40 67.5
SHI39989 Sapria himalayana HOM05D000743 ORTHO05D000580 1.2e-07 58.9 40 70.0
SHI40933 Sapria himalayana HOM05D000743 ORTHO05D000580 1.2e-07 58.9 40 70.0
Solyc00g500345.1 Solanum lycopersicum HOM05D000743 ORTHO05D000580 1.2e-07 58.9 40 70.0
Solyc00g500358.1 Solanum lycopersicum HOM05D000743 ORTHO05D000580 1.2e-07 58.9 40 70.0
Sopen00g001040 Solanum pennellii HOM05D000743 ORTHO05D000580 1.2e-07 58.9 40 70.0
TPR.G18523 Trifolium pratense HOM05D000743 ORTHO05D000580 1.2e-07 58.9 40 70.0
Dinv06721 Davidia involucrata HOM05D000743 ORTHO05D000580 1.6e-07 58.5 40 70.0
Gohir.D06G053900 Gossypium hirsutum HOM05D000743 ORTHO05D000580 1.6e-07 58.5 40 70.0
SHI34999 Sapria himalayana HOM05D000743 ORTHO05D000580 1.6e-07 58.5 40 70.0
SHI40316 Sapria himalayana HOM05D000743 ORTHO05D000580 1.6e-07 58.5 40 70.0
Lalb_Chr01g0011011 Lupinus albus HOM05D000743 ORTHO05D000580 2.1e-07 58.2 29 89.7
RcHm_v2.0_Chr5g0029951 Rosa chinensis HOM05D000743 ORTHO05D000580 2.1e-07 58.2 29 89.7
Zm00001eb238260 Zea mays HOM05D000743 ORTHO05D000580 2.1e-07 58.2 29 89.7
FvH4_2g28400 Fragaria vesca HOM05D000743 ORTHO05D000580 2.8e-07 57.8 40 67.5
RcHm_v2.0_MTg0498251 Rosa chinensis HOM05D000743 ORTHO05D000580 2.8e-07 57.8 40 67.5
SHI36371 Sapria himalayana HOM05D000743 ORTHO05D000580 2.8e-07 57.8 40 70.0
SHI36772 Sapria himalayana HOM05D000743 ORTHO05D000580 2.8e-07 57.8 29 89.7
SHI36783 Sapria himalayana HOM05D000743 ORTHO05D000580 2.8e-07 57.8 29 89.7
Solyc11g039980.3 Solanum lycopersicum HOM05D000743 ORTHO05D000580 2.8e-07 57.8 40 67.5
C09p46280 Brassica napus HOM05D000743 ORTHO05D000580 3.6e-07 57.4 40 72.5
AUR62026822 Chenopodium quinoa HOM05D000743 ORTHO05D000580 3.6e-07 57.4 40 70.0
ClCG11G003810 Citrullus lanatus HOM05D000743 ORTHO05D000580 3.6e-07 57.4 29 89.7
SalBow1G7966 Salvia bowleyana HOM05D000743 ORTHO05D000580 3.6e-07 57.4 40 70.0
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 3.6e-07 57.4 40 70.0
SHI36573 Sapria himalayana HOM05D000743 ORTHO05D000580 3.6e-07 57.4 29 89.7
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 3.6e-07 57.4 29 89.7
SHI41243 Sapria himalayana HOM05D000743 ORTHO05D000580 3.6e-07 57.4 40 70.0
SGA_v2.0_scaffold400G50835 Striga asiatica HOM05D000743 ORTHO05D000580 3.6e-07 57.4 40 70.0
unitig_87.g27985 Utricularia gibba HOM05D000743 ORTHO05D000580 3.6e-07 57.4 40 70.0
HanXRQChr11g0335391 Helianthus annuus HOM05D000743 ORTHO05D000580 4.7e-07 57.0 29 89.7
SHI33105 Sapria himalayana HOM05D000743 ORTHO05D000580 4.7e-07 57.0 29 89.7
ECA238G4293 Erigeron canadensis HOM05D000743 ORTHO05D000580 6.2e-07 56.6 29 89.7
Nitab4.5_0010333g0080 Nicotiana tabacum HOM05D000743 ORTHO05D000580 6.2e-07 56.6 40 67.5
Peaxi162Scf00625g00027 Petunia axillaris HOM05D000743 ORTHO05D000580 6.2e-07 56.6 40 65.0
SHI34615 Sapria himalayana HOM05D000743 ORTHO05D000580 6.2e-07 56.6 40 67.5
SHI37011 Sapria himalayana HOM05D000743 ORTHO05D000580 6.2e-07 56.6 29 89.7
Sopen03g010800 Solanum pennellii HOM05D000743 ORTHO05D000580 6.2e-07 56.6 29 86.2
CsaV3_5G017040 Cucumis sativus L. HOM05D000743 ORTHO05D000580 8.1e-07 56.2 29 89.7
HanXRQChr01g0013361 Helianthus annuus HOM05D000743 ORTHO05D000580 8.1e-07 56.2 29 89.7
Nitab4.5_0000513g0140 Nicotiana tabacum HOM05D000743 ORTHO05D000580 8.1e-07 56.2 40 65.0
RhsimMtG0001000 Rhododendron simsii HOM05D000743 ORTHO05D000580 8.1e-07 56.2 40 65.0
RhsimMtG0007400 Rhododendron simsii HOM05D000743 ORTHO05D000580 8.1e-07 56.2 40 65.0
SHI35456 Sapria himalayana HOM05D000743 ORTHO05D000580 8.1e-07 56.2 29 89.7
SHI36936 Sapria himalayana HOM05D000743 ORTHO05D000580 8.1e-07 56.2 29 89.7
SHI36974 Sapria himalayana HOM05D000743 ORTHO05D000580 8.1e-07 56.2 40 65.0
SHI40905 Sapria himalayana HOM05D000743 ORTHO05D000580 8.1e-07 56.2 40 67.5
SHI42052 Sapria himalayana HOM05D000743 ORTHO05D000580 8.1e-07 56.2 29 86.2
SHI50162 Sapria himalayana HOM05D000743 ORTHO05D000580 8.1e-07 56.2 40 67.5
SGA_v2.0_scaffold687G53454 Striga asiatica HOM05D000743 ORTHO05D000580 8.1e-07 56.2 29 89.7
FAN27G0873 Fragaria x ananassa HOM05D000743 ORTHO05D000580 1.1e-06 55.8 40 65.0
SHI36381 Sapria himalayana HOM05D001560 ORTHO05D003613 1.1e-06 55.8 40 67.5
SHI36586 Sapria himalayana HOM05D000743 ORTHO05D000580 1.1e-06 55.8 34 76.5
SHI39779 Sapria himalayana HOM05D000743 ORTHO05D000580 1.1e-06 55.8 40 67.5
SHI43453 Sapria himalayana HOM05D000743 ORTHO05D000580 1.1e-06 55.8 40 67.5
SHI47631 Sapria himalayana HOM05D000743 ORTHO05D000580 1.1e-06 55.8 29 86.2
SHI47781 Sapria himalayana HOM05D000743 ORTHO05D000580 1.1e-06 55.8 29 86.2
SHI48648 Sapria himalayana HOM05D000743 ORTHO05D000580 1.1e-06 55.8 29 86.2
Dinv02153 Davidia involucrata HOM05D000743 ORTHO05D000580 1.4e-06 55.5 40 65.0
SHI36018 Sapria himalayana HOM05D000743 ORTHO05D000580 1.4e-06 55.5 40 65.0
Psat0s2778g0080 Pisum sativum HOM05D000743 ORTHO05D000580 1.8e-06 55.1 29 82.8
SHI38465 Sapria himalayana HOM05D000743 ORTHO05D000580 1.8e-06 55.1 29 86.2
SHI44331 Sapria himalayana HOM05D000743 ORTHO05D000580 1.8e-06 55.1 40 65.0
HanXRQChr03g0087141 Helianthus annuus HOM05D000743 ORTHO05D000580 2.3e-06 54.7 40 67.5
SHI27344 Sapria himalayana HOM05D000743 ORTHO05D000580 2.3e-06 54.7 29 89.7
SHI34994 Sapria himalayana HOM05D000743 ORTHO05D000580 2.3e-06 54.7 29 82.8
SHI37167 Sapria himalayana HOM05D000743 ORTHO05D000580 2.3e-06 54.7 37 70.3
Nitab4.5_0001170g0170 Nicotiana tabacum HOM05D000743 ORTHO05D000580 3.1e-06 54.3 29 82.8
Oeu030840.1 Olea europaea HOM05D000743 ORTHO05D000580 3.1e-06 54.3 40 62.5
SHI37853 Sapria himalayana HOM05D000743 ORTHO05D000580 3.1e-06 54.3 34 76.5
BcaC05g26883 Brassica carinata HOM05D000743 ORTHO05D000580 5.2e-06 53.5 34 73.5
QL11p017578 Quercus lobata HOM05D000743 ORTHO05D000580 5.2e-06 53.5 34 73.5
SHI35186 Sapria himalayana HOM05D000743 ORTHO05D000580 5.2e-06 53.5 26 92.3
Thecc.02G216100 Theobroma cacao HOM05D000743 ORTHO05D000580 5.2e-06 53.5 40 65.0
AUR62042122 Chenopodium quinoa HOM05D000743 ORTHO05D000580 6.8e-06 53.1 40 65.0


User provided reference genes

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