Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p07820 Brassica napus HOM05D013546 ORTHO05D014955 1.7e-105 386.0 183 100.0
BraA03t10225Z Brassica rapa HOM05D013546 ORTHO05D014955 1.7e-105 386.0 183 100.0
C01p40840 Brassica napus HOM05D013546 ORTHO05D014955 2.5e-85 318.9 178 87.1
BolC1t03583H Brassica oleracea HOM05D013546 ORTHO05D014955 8.3e-81 303.9 178 83.7
C01p36250 Brassica napus HOM05D013546 ORTHO05D014955 9.2e-80 300.4 166 88.6
C07p15310 Brassica napus HOM05D013546 ORTHO05D014955 1.7e-25 120.2 85 77.6
BolC1t04040H Brassica oleracea HOM05D013546 ORTHO05D014955 8.2e-20 101.3 74 74.3
CARHR076510 Cardamine hirsuta HOM05D000189 ORTHO05D006628 9.3e-16 87.8 77 59.7
Sp3g01540 Schrenkiella parvula HOM05D000189 ORTHO05D006628 1.6e-15 87.0 74 62.2
BcaB08g36882 Brassica carinata HOM05D000189 ORTHO05D006628 3.5e-15 85.9 77 58.4
A10p23010 Brassica napus HOM05D000189 ORTHO05D006628 6.0e-15 85.1 77 58.4
BolC9t58945H Brassica oleracea HOM05D000189 ORTHO05D006628 6.0e-15 85.1 77 58.4
BraA10t44370Z Brassica rapa HOM05D000189 ORTHO05D006628 6.0e-15 85.1 77 58.4
AL3G11870 Arabidopsis lyrata HOM05D000189 ORTHO05D006628 1.8e-14 83.6 74 59.5
Thhalv10013742m.g Eutrema salsugineum HOM05D000189 ORTHO05D006628 1.8e-14 83.6 77 57.1
THA.LOC104820953 Tarenaya hassleriana HOM05D000189 ORTHO05D006628 1.8e-14 83.6 77 57.1
Aa31LG11G13570 Aethionema arabicum HOM05D000189 ORTHO05D006628 2.3e-14 83.2 77 57.1
BNapus_Darmor_BZH_scaffold_99p00030 Brassica napus HOM05D000189 ORTHO05D006628 2.3e-14 83.2 74 59.5
BolC1t05899H Brassica oleracea HOM05D000189 ORTHO05D006628 2.3e-14 83.2 74 59.5
CARHR197270 Cardamine hirsuta HOM05D000189 ORTHO05D006628 2.3e-14 83.2 77 57.1
BcaC04g18913 Brassica carinata HOM05D000189 ORTHO05D006628 5.1e-14 82.0 77 57.1
C09p60980 Brassica napus HOM05D000189 ORTHO05D006628 5.1e-14 82.0 77 57.1
Cpa.g.sc179.18 Carica papaya HOM05D000189 ORTHO05D006628 5.1e-14 82.0 77 57.1
Carub.0006s1423 Capsella rubella HOM05D000189 ORTHO05D006628 1.5e-13 80.5 77 54.5
BNapus_Darmor_BZH_scaffold_122p00020 Brassica napus HOM05D000189 ORTHO05D006628 1.9e-13 80.1 74 58.1
CANSAT64G0905 Cannabis sativa HOM05D000189 ORTHO05D006628 1.9e-13 80.1 77 55.8
Potri.017G113200 Populus trichocarpa HOM05D000189 ORTHO05D006628 1.9e-13 80.1 77 55.8
BcaC09g47706 Brassica carinata HOM05D000189 ORTHO05D006628 2.5e-13 79.7 74 58.1
Ciclev10011926m.g Citrus clementina HOM05D000189 ORTHO05D006628 3.3e-13 79.3 77 55.8
BcaB06g26615 Brassica carinata HOM05D013546 ORTHO05D014955 5.7e-13 78.6 69 58.0
Phvul.004G064300 Phaseolus vulgaris HOM05D000189 ORTHO05D006628 5.7e-13 78.6 77 54.5
VMungo0464G0226 Vigna mungo HOM05D000189 ORTHO05D006628 5.7e-13 78.6 77 54.5
ClCG11G005390 Citrullus lanatus HOM05D000189 ORTHO05D006628 1.3e-12 77.4 77 54.5
Prupe.3G239200 Prunus persica HOM05D000189 ORTHO05D006628 1.3e-12 77.4 77 54.5
Sed0006396 Sechium edule HOM05D000189 ORTHO05D006628 1.3e-12 77.4 77 54.5
Atru.chr8.861 Acer truncatum HOM05D000189 ORTHO05D006628 1.6e-12 77.0 77 54.5
MD17G1074800 Malus domestica HOM05D000189 ORTHO05D006628 1.6e-12 77.0 77 54.5
Potri.004G101800 Populus trichocarpa HOM05D000189 ORTHO05D006628 1.6e-12 77.0 77 53.2
Thecc.04G136800 Theobroma cacao HOM05D000189 ORTHO05D006628 2.2e-12 76.6 77 53.2
QL02p051539 Quercus lobata HOM05D000189 ORTHO05D006628 2.8e-12 76.3 77 53.2
MELO3C022092.2 Cucumis melo HOM05D000189 ORTHO05D006628 3.7e-12 75.9 77 53.2
Gohir.A11G162700 Gossypium hirsutum HOM05D000189 ORTHO05D006628 3.7e-12 75.9 77 53.2
Gohir.D11G168900 Gossypium hirsutum HOM05D000189 ORTHO05D006628 3.7e-12 75.9 77 53.2
Gorai.007G180500 Gossypium raimondii HOM05D000189 ORTHO05D006628 3.7e-12 75.9 77 53.2
Sed0002805 Sechium edule HOM05D000189 ORTHO05D006628 3.7e-12 75.9 77 53.2
CsaV3_5G039170 Cucumis sativus L. HOM05D000189 ORTHO05D006628 4.8e-12 75.5 77 51.9
FvH4_6g45310 Fragaria vesca HOM05D000189 ORTHO05D006628 4.8e-12 75.5 77 53.2
FAN05G4849 Fragaria x ananassa HOM05D000298 ORTHO05D000553 4.8e-12 75.5 77 53.2
RcHm_v2.0_Chr2g0163071 Rosa chinensis HOM05D000189 ORTHO05D006628 4.8e-12 75.5 77 53.2
Eucgr.J01476 Eucalyptus grandis HOM05D000189 ORTHO05D006628 6.3e-12 75.1 77 53.2
CiPaw.03G060200 Carya illinoinensis HOM05D000189 ORTHO05D006628 1.1e-11 74.3 77 51.9
AT3G02510 Arabidopsis thaliana HOM05D000189 ORTHO05D006628 1.4e-11 73.9 66 59.1
Lj2g0014953 Lotus japonicus HOM05D000189 ORTHO05D006628 1.4e-11 73.9 77 51.9
MD07G1096100 Malus domestica HOM05D000189 ORTHO05D006628 1.4e-11 73.9 77 51.9
Psat1g078920 Pisum sativum HOM05D000189 ORTHO05D006628 1.4e-11 73.9 77 51.9
arahy.Tifrunner.gnm1.ann1.H2M9W7 Arachis hypogaea HOM05D000189 ORTHO05D006628 2.4e-11 73.2 77 50.6
BcaC02g08415 Brassica carinata HOM05D013546 ORTHO05D014955 4.1e-11 72.4 75 52.0
TWI74G0720 Tripterygium wilfordii HOM05D000189 ORTHO05D006628 4.1e-11 72.4 77 50.6
Ca_13738_v3 Cicer arietinum L. HOM05D000189 ORTHO05D006628 5.3e-11 72.0 77 49.4
arahy.Tifrunner.gnm1.ann1.50M490 Arachis hypogaea HOM05D000189 ORTHO05D006628 6.9e-11 71.6 88 46.6
Medtr0024s0070 Medicago truncatula HOM05D000189 ORTHO05D006628 6.9e-11 71.6 77 49.4
HPP92_026956 Vanilla planifolia HOM05D000189 ORTHO05D006628 6.9e-11 71.6 77 53.2
Lj2A446T44 Lonicera japonica HOM05D000189 ORTHO05D006628 9.0e-11 71.2 77 53.2
Nn4g23772 Nelumbo nucifera HOM05D000189 ORTHO05D006628 9.0e-11 71.2 77 53.2
Sc11g0008230 Simmondsia chinensis HOM05D000189 ORTHO05D006628 9.0e-11 71.2 77 51.9
Cfa007941 Carpinus fangiana HOM05D000189 ORTHO05D006628 1.2e-10 70.9 77 49.4
Migut.H00204 Erythranthe guttata HOM05D000189 ORTHO05D006628 1.2e-10 70.9 97 45.4
Nn3g17776 Nelumbo nucifera HOM05D000189 ORTHO05D006628 1.2e-10 70.9 77 53.2
Sp6g28090 Schrenkiella parvula HOM05D000189 ORTHO05D006628 1.2e-10 70.9 65 58.5
Carub.0003s0162 Capsella rubella HOM05D000189 ORTHO05D006628 1.5e-10 70.5 63 60.3
TWI74G1546 Tripterygium wilfordii HOM05D000189 ORTHO05D006628 1.5e-10 70.5 77 49.4
AT5G16040 Arabidopsis thaliana HOM05D000189 ORTHO05D006628 2.0e-10 70.1 65 56.9
AUR62008975 Chenopodium quinoa HOM05D000189 ORTHO05D006628 2.0e-10 70.1 75 53.3
AUR62014530 Chenopodium quinoa HOM05D000189 ORTHO05D006628 2.0e-10 70.1 75 53.3
PSO063G6465 Papaver somniferum HOM05D000189 ORTHO05D006628 2.0e-10 70.1 77 51.9
PSO782G3998 Papaver somniferum HOM05D000189 ORTHO05D006628 2.0e-10 70.1 77 51.9
DCAR_017208 Daucus carota HOM05D000189 ORTHO05D006628 2.6e-10 69.7 77 51.9
TPR.G32472 Trifolium pratense HOM05D000189 ORTHO05D006628 2.6e-10 69.7 77 49.4
Aqoxy3G03932 Aquilegia oxysepala HOM05D000189 ORTHO05D006628 3.4e-10 69.3 77 51.9
GSVIVG01031071001 Vitis vinifera HOM05D000189 ORTHO05D006628 3.4e-10 69.3 77 51.9
COL.COLO4_16185 Corchorus olitorius HOM05D000189 ORTHO05D006628 4.5e-10 68.9 156 35.3
Hma1.2p1_0136F.1_g062140 Hydrangea macrophylla HOM05D000189 ORTHO05D006628 4.5e-10 68.9 77 50.6
Rhsim10G0063200 Rhododendron simsii HOM05D000189 ORTHO05D006628 4.5e-10 68.9 77 51.9
SHI28229 Sapria himalayana HOM05D000189 ORTHO05D006628 4.5e-10 68.9 75 49.3
Ah.16g101890 Amaranthus hybridus HOM05D000298 ORTHO05D006628 5.9e-10 68.6 77 49.4
PGR042G3999 Punica granatum HOM05D000189 ORTHO05D006628 5.9e-10 68.6 65 56.9
MSTRG.23563 Avicennia marina HOM05D000189 ORTHO05D006628 7.7e-10 68.2 77 50.6
Solyc02g085780.3 Solanum lycopersicum HOM05D000189 ORTHO05D006628 7.7e-10 68.2 77 50.6
Sopen02g030470 Solanum pennellii HOM05D000189 ORTHO05D006628 7.7e-10 68.2 77 50.6
PGSC0003DMG401012656 Solanum tuberosum HOM05D000189 ORTHO05D006628 7.7e-10 68.2 77 50.6
ATR0097G025 Amborella trichopoda HOM05D000189 ORTHO05D006628 1.0e-09 67.8 77 50.6
Cc07_g08940 Coffea canephora HOM05D000189 ORTHO05D006628 1.0e-09 67.8 77 51.9
Peaxi162Scf01327g00132 Petunia axillaris HOM05D000189 ORTHO05D006628 1.0e-09 67.8 77 50.6
SGA_v2.0_scaffold33G13475 Striga asiatica HOM05D000189 ORTHO05D006628 1.0e-09 67.8 77 49.4
Nitab4.5_0002288g0060 Nicotiana tabacum HOM05D000189 ORTHO05D006628 1.3e-09 67.4 77 50.6
vmacro05570 Vaccinium macrocarpon HOM05D000189 ORTHO05D006628 1.3e-09 67.4 77 50.6
Aa31LG5G13010 Aethionema arabicum HOM05D000189 ORTHO05D006628 1.7e-09 67.0 63 57.1
Dinv33930 Davidia involucrata HOM05D000189 ORTHO05D006628 1.7e-09 67.0 77 50.6
Dinv34843 Davidia involucrata HOM05D000189 ORTHO05D006628 1.7e-09 67.0 77 50.6
MD09G1085900 Malus domestica HOM05D000189 ORTHO05D006628 1.7e-09 67.0 92 43.5
Nitab4.5_0004118g0130 Nicotiana tabacum HOM05D000189 ORTHO05D006628 1.7e-09 67.0 77 49.4
AL6G26920 Arabidopsis lyrata HOM05D000189 ORTHO05D006628 2.2e-09 66.6 63 55.6
CAN.G358.140 Capsicum annuum HOM05D000189 ORTHO05D006628 2.2e-09 66.6 77 50.6
Actinidia36311 Actinidia chinensis HOM05D000189 ORTHO05D006628 2.9e-09 66.2 77 50.6
FAN14G4610 Fragaria x ananassa HOM05D000298 ORTHO05D006628 2.9e-09 66.2 90 45.6
Hund13729 Selenicereus undatus HOM05D000189 ORTHO05D006628 3.8e-09 65.9 77 49.4
unitig_60.g25410 Utricularia gibba HOM05D000189 ORTHO05D006628 3.8e-09 65.9 77 48.1
CSS0046451 Camellia sinensis var. sinensis HOM05D000189 ORTHO05D006628 5.0e-09 65.5 77 49.4
CDE05G3347 Ceratophyllum demersum HOM05D000189 ORTHO05D006628 8.5e-09 64.7 75 48.0
CSS0021672 Camellia sinensis var. sinensis HOM05D000189 ORTHO05D006628 1.1e-08 64.3 77 49.4
CDE05G0975 Ceratophyllum demersum HOM05D000298 ORTHO05D006628 1.9e-08 63.5 75 48.0
Mapoly0030s0128 Marchantia polymorpha HOM05D000189 ORTHO05D006628 1.9e-08 63.5 77 48.1
TAR371G0089 Trochodendron aralioides HOM05D000189 ORTHO05D006628 1.9e-08 63.5 77 49.4
SalBow3G2679 Salvia bowleyana HOM05D000189 ORTHO05D006628 3.2e-08 62.8 68 52.9
Glyma.19G046100 Glycine max HOM05D000189 ORTHO05D006628 9.4e-08 61.2 62 53.2
Os08g0430700 Oryza sativa ssp. japonica HOM05D000189 ORTHO05D006628 2.1e-07 60.1 66 53.0
Lalb_Chr02g0158281 Lupinus albus HOM05D000189 ORTHO05D006628 3.6e-07 59.3 62 51.6
Sabra04G0078500 Salix brachista HOM05D000189 ORTHO05D006628 4.6e-07 58.9 118 35.6
EL10Ac2g04596 Beta vulgaris HOM05D000189 ORTHO05D006628 6.1e-07 58.5 67 49.3
SMO271G0115 Selaginella moellendorffii HOM05D000189 ORTHO05D006628 7.9e-07 58.2 77 45.5
Hund16131 Selenicereus undatus HOM05D000189 ORTHO05D006628 1.4e-06 57.4 77 48.1


User provided reference genes

Program Settings