Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p07790 Brassica napus HOM05D004716 ORTHO05D005646 0.0e+00 1176.0 590 100.0
BraSC36t46025Z Brassica rapa HOM05D004716 ORTHO05D005646 0.0e+00 1169.8 590 99.3
BcaC08g42816 Brassica carinata HOM05D004716 ORTHO05D005646 0.0e+00 1120.9 590 96.3
C06p00280 Brassica napus HOM05D004716 ORTHO05D005646 0.0e+00 1120.9 590 96.3
BcaB07g33979 Brassica carinata HOM05D004716 ORTHO05D005646 0.0e+00 1091.3 595 92.8
Sp1g32700 Schrenkiella parvula HOM05D004716 ORTHO05D005646 2.0e-301 1038.5 612 87.1
Thhalv10011324m.g Eutrema salsugineum HOM05D004716 ORTHO05D005646 7.8e-298 1026.5 611 85.3
Carub.0001s3471 Capsella rubella HOM05D004716 ORTHO05D005646 5.8e-293 1010.4 599 86.1
AL1G51810 Arabidopsis lyrata HOM05D004716 ORTHO05D005646 2.4e-286 988.4 602 84.1
AT1G43690 Arabidopsis thaliana HOM05D004716 ORTHO05D005646 2.1e-282 975.3 601 83.2
Aa31LG6G9740 Aethionema arabicum HOM05D004716 ORTHO05D005646 1.5e-272 942.6 618 79.9
CARHR035580 Cardamine hirsuta HOM05D004716 ORTHO05D005646 3.2e-267 924.9 594 79.6
THA.LOC104809692 Tarenaya hassleriana HOM05D004716 ORTHO05D005646 1.8e-233 812.8 572 73.4
Manes.18G091200 Manihot esculenta HOM05D004716 ORTHO05D005646 5.0e-228 794.7 608 68.3
Haze_17746 Corylus avellana HOM05D004716 ORTHO05D005646 5.2e-225 784.6 613 66.4
Cfa018329 Carpinus fangiana HOM05D004716 ORTHO05D005646 9.7e-224 780.4 613 66.1
MD05G1023700 Malus domestica HOM05D004716 ORTHO05D005646 9.7e-224 780.4 628 64.5
CANSAT25G0539 Cannabis sativa HOM05D004716 ORTHO05D005646 4.8e-223 778.1 624 64.4
TWI34G0952 Tripterygium wilfordii HOM05D004716 ORTHO05D005646 1.1e-222 776.9 610 67.2
Potri.005G191300 Populus trichocarpa HOM05D004716 ORTHO05D005646 2.4e-222 775.8 618 65.5
Potri.002G069100 Populus trichocarpa HOM05D004716 ORTHO05D005646 4.5e-221 771.5 632 65.0
RcHm_v2.0_Chr6g0275661 Rosa chinensis HOM05D004716 ORTHO05D005646 3.8e-220 768.5 612 65.4
CiPaw.15G016900 Carya illinoinensis HOM05D004716 ORTHO05D005646 5.0e-220 768.1 612 65.0
Prupe.8G028200 Prunus persica HOM05D004716 ORTHO05D005646 6.5e-220 767.7 627 64.6
arahy.Tifrunner.gnm1.ann1.LT68UB Arachis hypogaea HOM05D004716 ORTHO05D005646 1.1e-219 766.9 633 65.1
arahy.Tifrunner.gnm1.ann1.RZZD7S Arachis hypogaea HOM05D004716 ORTHO05D005646 1.1e-219 766.9 633 65.1
MD10G1024300 Malus domestica HOM05D004716 ORTHO05D005646 2.5e-219 765.8 628 64.0
Duzib116G0661 Durio zibethinus HOM05D004716 ORTHO05D005646 5.5e-219 764.6 617 64.8
Sabra05G0146100 Salix brachista HOM05D004716 ORTHO05D005646 5.5e-219 764.6 618 65.9
GSVIVG01034512001 Vitis vinifera HOM05D004716 ORTHO05D005646 5.5e-219 764.6 618 65.2
TWI60G0041 Tripterygium wilfordii HOM05D004716 ORTHO05D005646 2.1e-218 762.7 613 65.3
FAN27G2333 Fragaria x ananassa HOM05D004716 ORTHO05D005646 3.6e-218 761.9 610 65.6
Glyma.10G225500 Glycine max HOM05D004716 ORTHO05D005646 8.0e-218 760.8 620 64.8
CiPaw.16G013500 Carya illinoinensis HOM05D004716 ORTHO05D005646 1.4e-217 760.0 607 64.7
ClCG09G009620 Citrullus lanatus HOM05D004716 ORTHO05D005646 5.2e-217 758.1 610 64.8
FAN15G2444 Fragaria x ananassa HOM05D004716 ORTHO05D005646 8.8e-217 757.3 607 65.2
Atru.chr13.2155 Acer truncatum HOM05D004716 ORTHO05D005646 1.2e-216 756.9 627 62.2
Glyma.20G166300 Glycine max HOM05D004716 ORTHO05D005646 3.4e-216 755.4 621 64.7
Thecc.08G149900 Theobroma cacao HOM05D004716 ORTHO05D005646 3.4e-216 755.4 613 63.8
FvH4_2g13910 Fragaria vesca HOM05D004716 ORTHO05D005646 4.4e-216 755.0 610 65.1
Duzib041G0148 Durio zibethinus HOM05D004716 ORTHO05D005646 5.7e-216 754.6 615 64.2
Phvul.007G079400 Phaseolus vulgaris HOM05D004716 ORTHO05D005646 5.7e-216 754.6 615 64.7
Ca_19935_v3 Cicer arietinum L. HOM05D004716 ORTHO05D005646 9.8e-216 753.8 623 63.9
TAR381G1500 Trochodendron aralioides HOM05D004716 ORTHO05D005646 2.8e-215 752.3 646 61.1
MELO3C023718.2 Cucumis melo HOM05D004716 ORTHO05D005646 1.1e-214 750.4 610 63.8
FAN24G2048 Fragaria x ananassa HOM05D004716 ORTHO05D005646 1.4e-214 750.0 610 64.9
CsaV3_7G025180 Cucumis sativus L. HOM05D004716 ORTHO05D005646 5.4e-214 748.0 610 63.8
FAN20G2258 Fragaria x ananassa HOM05D004716 ORTHO05D005646 1.2e-213 746.9 610 64.9
COL.COLO4_37837 Corchorus olitorius HOM05D004716 ORTHO05D005646 2.0e-213 746.1 615 63.9
Sabra02G0054300 Salix brachista HOM05D004716 ORTHO05D005646 2.7e-213 745.7 632 63.8
Gorai.009G253500 Gossypium raimondii HOM05D004716 ORTHO05D005646 7.7e-213 744.2 617 63.2
Dinv41092 Davidia involucrata HOM05D004716 ORTHO05D005646 2.9e-212 742.3 630 62.5
Sed0005850 Sechium edule HOM05D004716 ORTHO05D005646 2.9e-212 742.3 609 64.5
Gohir.A05G242900 Gossypium hirsutum HOM05D004716 ORTHO05D005646 5.5e-211 738.0 617 63.0
Duzib093G0980 Durio zibethinus HOM05D004716 ORTHO05D005646 1.2e-210 736.9 625 62.6
Hma1.2p1_0105F.1_g050810 Hydrangea macrophylla HOM05D004716 ORTHO05D005646 2.1e-210 736.1 650 59.5
Dinv25852 Davidia involucrata HOM05D004716 ORTHO05D005646 2.7e-210 735.7 631 61.8
Lj5g0004042 Lotus japonicus HOM05D004716 ORTHO05D005646 3.6e-210 735.3 623 64.7
Aqoxy5G02106 Aquilegia oxysepala HOM05D004716 ORTHO05D005646 1.8e-209 733.0 630 61.3
Actinidia17798 Actinidia chinensis HOM05D004716 ORTHO05D005646 2.3e-209 732.6 616 62.3
Gorai.009G285100 Gossypium raimondii HOM05D004716 ORTHO05D005646 6.8e-209 731.1 620 63.7
HanXRQChr10g0279061 Helianthus annuus HOM05D004716 ORTHO05D005646 8.8e-209 730.7 633 61.3
Sed0016522 Sechium edule HOM05D004716 ORTHO05D005646 8.8e-209 730.7 608 63.7
TAR625G0458 Trochodendron aralioides HOM05D004716 ORTHO05D005646 5.7e-208 728.0 640 60.6
MBI09_g32373_MAGBIO Magnolia biondii HOM05D004716 ORTHO05D005646 7.5e-208 727.6 614 63.4
Oeu046025.1 Olea europaea HOM05D004716 ORTHO05D005646 7.5e-208 727.6 618 62.8
Cc10_g14730 Coffea canephora HOM05D004716 ORTHO05D005646 9.8e-208 727.2 635 60.2
Gohir.A05G270100 Gossypium hirsutum HOM05D004716 ORTHO05D005646 2.2e-207 726.1 620 63.2
Nn5g28715 Nelumbo nucifera HOM05D004716 ORTHO05D005646 2.2e-207 726.1 639 60.7
Nitab4.5_0008759g0020 Nicotiana tabacum HOM05D004716 ORTHO05D005646 2.8e-207 725.7 628 60.8
Lalb_Chr01g0009631 Lupinus albus HOM05D004716 ORTHO05D005646 4.9e-207 724.9 637 62.0
Nitab4.5_0000032g0020 Nicotiana tabacum HOM05D004716 ORTHO05D005646 2.4e-206 722.6 638 60.0
PSO210G2251 Papaver somniferum HOM05D004716 ORTHO05D005646 2.4e-206 722.6 646 59.1
Rhsim06G0090400 Rhododendron simsii HOM05D004716 ORTHO05D005646 2.9e-204 715.7 622 61.1
MSTRG.22371 Avicennia marina HOM05D004716 ORTHO05D005646 8.6e-204 714.1 649 60.1
Eucgr.F04241 Eucalyptus grandis HOM05D004716 ORTHO05D005646 5.6e-203 711.4 636 60.2
PGR044G2101 Punica granatum HOM05D004716 ORTHO05D005646 7.3e-203 711.1 616 60.4
Sopen04g027280 Solanum pennellii HOM05D004716 ORTHO05D005646 7.3e-203 711.1 637 59.2
Lalb_Chr06g0161551 Lupinus albus HOM05D004716 ORTHO05D005646 8.0e-202 707.6 605 62.3
EL10Ac1g01533 Beta vulgaris HOM05D004716 ORTHO05D005646 1.4e-201 706.8 624 60.1
Ciclev10000573m.g Citrus clementina HOM05D004716 ORTHO05D005646 1.8e-201 706.4 634 59.9
TPR.G30003 Trifolium pratense HOM05D004716 ORTHO05D005646 4.0e-201 705.3 623 61.6
Medtr1g098940 Medicago truncatula HOM05D004716 ORTHO05D005646 2.0e-200 703.0 629 61.2
Migut.N03224 Erythranthe guttata HOM05D004716 ORTHO05D005646 3.4e-200 702.2 646 58.7
AUR62013572 Chenopodium quinoa HOM05D004716 ORTHO05D005646 1.3e-199 700.3 630 58.9
Lsat_1_v5_gn_6_99641 Lactuca sativa HOM05D004716 ORTHO05D005646 2.2e-199 699.5 619 60.3
ECA246G4589 Erigeron canadensis HOM05D004716 ORTHO05D005646 3.7e-199 698.7 618 60.2
DCAR_001131 Daucus carota HOM05D004716 ORTHO05D005646 6.4e-199 698.0 608 60.2
CAN.G268.7 Capsicum annuum HOM05D004716 ORTHO05D005646 1.8e-198 696.4 637 57.6
QL02p024060 Quercus lobata HOM05D004716 ORTHO05D005646 2.4e-198 696.0 743 53.7
Ah.05g167860 Amaranthus hybridus HOM05D004716 ORTHO05D005646 1.6e-197 693.3 609 59.8
Gohir.D05G272200 Gossypium hirsutum HOM05D004716 ORTHO05D005646 2.0e-197 693.0 620 61.3
Peaxi162Scf00765g00315 Petunia axillaris HOM05D004716 ORTHO05D005646 7.8e-197 691.0 621 59.3
Gohir.D05G244400 Gossypium hirsutum HOM05D004716 ORTHO05D005646 1.0e-196 690.6 610 60.2
PSO238G0051 Papaver somniferum HOM05D004716 ORTHO05D005646 1.3e-196 690.3 648 56.8
Sed0004003 Sechium edule HOM05D004716 ORTHO05D005646 5.0e-196 688.3 509 68.4
AUR62026717 Chenopodium quinoa HOM05D004716 ORTHO05D005646 2.5e-195 686.0 608 59.0
Solyc04g071320.4 Solanum lycopersicum HOM05D004716 ORTHO05D005646 8.0e-194 681.0 637 57.1
SalBow7G0781 Salvia bowleyana HOM05D004716 ORTHO05D005646 1.0e-193 680.6 615 59.7
TPR.G36694 Trifolium pratense HOM05D004716 ORTHO05D005646 5.2e-193 678.3 537 64.4
unitig_62.g23528 Utricularia gibba HOM05D004716 ORTHO05D005646 2.7e-189 666.0 621 57.3
SGA_v2.0_scaffold25G11175 Striga asiatica HOM05D004716 ORTHO05D005646 6.6e-188 661.4 645 56.7
Lj7A371T50 Lonicera japonica HOM05D004716 ORTHO05D005646 1.6e-186 656.8 554 61.7
CDE08G0143 Ceratophyllum demersum HOM05D004716 ORTHO05D005646 1.4e-182 643.7 615 58.4
Zm00001eb422340 Zea mays HOM05D004716 ORTHO05D005646 2.1e-181 639.8 629 54.4
Nn1g06102 Nelumbo nucifera HOM05D004716 ORTHO05D005646 3.6e-178 629.0 487 66.3
Migut.C01013 Erythranthe guttata HOM05D004716 ORTHO05D005646 1.4e-174 617.1 610 56.7
CSS0049856 Camellia sinensis var. sinensis HOM05D004716 ORTHO05D005646 3.6e-170 602.4 457 66.5
SHI09390 Sapria himalayana HOM05D004716 ORTHO05D005646 5.8e-168 595.1 494 60.9
Lj4C695G10 Lonicera japonica HOM05D004716 ORTHO05D005646 2.1e-165 586.6 595 53.9
HPP92_019355 Vanilla planifolia HOM05D004716 ORTHO05D005646 3.5e-165 585.9 550 57.1
SalBow6G6163 Salvia bowleyana HOM05D004716 ORTHO05D005646 4.6e-165 585.5 679 49.9
SMO331G0079 Selaginella moellendorffii HOM05D004716 ORTHO05D005646 4.6e-165 585.5 595 53.4
Oeu011938.1 Olea europaea HOM05D004716 ORTHO05D005646 8.7e-164 581.3 608 53.3
Cpa.g.sc21.190 Carica papaya HOM05D004716 ORTHO05D005646 9.0e-161 571.2 432 67.8
SGA_v2.0_scaffold24G10374 Striga asiatica HOM05D004716 ORTHO05D005646 9.9e-160 567.8 629 52.1
Ca_25988_v3 Cicer arietinum L. HOM05D004716 ORTHO05D005646 2.9e-159 566.2 400 70.2
Mapoly0014s0164 Marchantia polymorpha HOM05D004716 ORTHO05D005646 7.9e-157 558.1 664 47.6
Sc02g0004170 Simmondsia chinensis HOM05D004716 ORTHO05D005646 1.1e-153 547.7 452 61.3
Pp3c6_18530 Physcomitrium patens HOM05D004716 ORTHO05D005646 9.0e-153 544.7 644 49.1
Pp3c5_6660 Physcomitrium patens HOM05D004716 ORTHO05D005646 1.5e-152 543.9 643 48.7
CDE06G2375 Ceratophyllum demersum HOM05D004716 ORTHO05D005646 9.9e-152 541.2 604 51.8
ATR0772G093 Amborella trichopoda HOM05D004716 ORTHO05D005646 1.4e-150 537.3 461 59.2
Psat6g193200 Pisum sativum HOM05D004716 ORTHO05D005646 2.0e-144 516.9 318 77.4
Oeu014493.1 Olea europaea HOM05D004716 ORTHO05D005646 2.2e-143 513.5 359 69.9
AagrBONN_evm.TU.Sc2ySwM_344.4417 Anthoceros agrestis HOM05D004716 ORTHO05D005646 6.0e-141 505.4 684 44.3
Psat6g193040 Pisum sativum HOM05D004716 ORTHO05D005646 6.9e-137 491.9 303 76.2
vmacro21155 Vaccinium macrocarpon HOM05D004716 ORTHO05D005646 5.3e-129 465.7 313 71.6
Zm00001eb422260 Zea mays HOM05D004716 ORTHO05D005646 1.0e-124 451.4 313 70.0
CBR_g11170 Chara braunii HOM05D004716 ORTHO05D005646 7.4e-123 445.3 552 45.7
Os04g0421800 Oryza sativa ssp. japonica HOM05D004716 ORTHO05D005646 2.5e-118 430.3 301 68.8
HanXRQChr10g0277841 Helianthus annuus HOM05D004716 ORTHO05D005646 3.1e-105 386.7 297 67.7
Zm00001eb422280 Zea mays HOM05D004716 ORTHO05D005646 1.2e-96 358.2 258 67.1
Zm00001eb422320 Zea mays HOM05D004716 ORTHO05D005646 1.2e-96 358.2 258 67.1
Actinidia10653 Actinidia chinensis HOM05D004716 ORTHO05D005646 6.2e-61 239.6 242 57.4
PRCOL_00002924 Prasinoderma coloniale HOM05D004716 ORTHO05D005646 3.2e-57 227.3 345 38.8
VMungo0464G1352 Vigna mungo HOM05D004716 ORTHO05D005646 4.9e-42 176.8 235 48.5
Cpa.g.sc21.191 Carica papaya HOM05D004716 ORTHO05D005646 9.3e-41 172.6 171 57.9
Cre06.g286600 Chlamydomonas reinhardtii HOM05D004716 ORTHO05D005646 3.8e-34 150.6 309 35.6
CAN.G309.90 Capsicum annuum HOM05D004716 ORTHO05D005646 3.5e-32 144.1 176 48.3
PRCOL_00004133 Prasinoderma coloniale HOM05D004716 ORTHO05D005646 5.3e-28 130.2 293 31.7
ATR0772G018 Amborella trichopoda HOM05D004716 ORTHO05D005646 1.5e-27 128.6 187 43.9
Actinidia13988 Actinidia chinensis HOM05D004716 ORTHO05D005646 7.1e-25 119.8 86 62.8
Actinidia10651 Actinidia chinensis HOM05D004716 ORTHO05D005646 6.7e-23 113.2 155 45.8
Ca_25987_v3 Cicer arietinum L. HOM05D004716 ORTHO05D005646 2.7e-16 91.3 125 48.8
SEGI_31186 Sequoiadendron giganteum HOM05D004716 ORTHO05D005646 2.7e-16 91.3 150 45.3
Oeu014494.1 Olea europaea HOM05D004716 ORTHO05D005646 3.3e-14 84.3 149 38.9
TAR636G3535 Trochodendron aralioides HOM05D004716 ORTHO05D005646 9.7e-14 82.8 92 51.1
HanXRQChr10g0277851 Helianthus annuus HOM05D004716 ORTHO05D005646 1.4e-12 79.0 107 49.5
CSS0021208 Camellia sinensis var. sinensis HOM05D004716 ORTHO05D005646 2.2e-10 71.6 131 39.7
Psat6g193080 Pisum sativum HOM05D000257 ORTHO05D008537 2.7e-08 64.7 64 48.4
Ca_26438_v3 Cicer arietinum L. HOM05D004716 ORTHO05D005646 1.1e-06 59.3 136 35.3


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