Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p04790 Brassica napus HOM05D001286 ORTHO05D000440 4.7e-128 461.1 214 100.0
A10p04770 Brassica napus HOM05D001286 ORTHO05D000440 6.6e-122 440.7 212 96.7
BraA10t42747Z Brassica rapa HOM05D001286 ORTHO05D000440 7.3e-121 437.2 212 96.2
BraA10t42745Z Brassica rapa HOM05D001286 ORTHO05D000440 4.3e-81 305.1 181 82.3
BcaC01g02970 Brassica carinata HOM05D001286 ORTHO05D000440 3.1e-63 245.7 212 63.7
AT1G49360 Arabidopsis thaliana HOM05D001286 ORTHO05D000440 8.8e-58 227.6 194 60.3
C03p57640 Brassica napus HOM05D001286 ORTHO05D000440 2.7e-54 216.1 143 74.1
BolC3t18038H Brassica oleracea HOM05D001286 ORTHO05D000440 2.7e-54 216.1 143 74.1
BcaC05g24302 Brassica carinata HOM05D001286 ORTHO05D000440 5.5e-52 208.4 193 58.5
BolC5t29218H Brassica oleracea HOM05D001286 ORTHO05D000440 4.4e-49 198.7 172 60.5
C05p04470 Brassica napus HOM05D001286 ORTHO05D000440 1.8e-47 193.4 133 73.7
A09p26900 Brassica napus HOM05D001286 ORTHO05D041492 1.7e-24 117.1 185 39.5
BcaC04g21189 Brassica carinata HOM05D001286 ORTHO05D000440 2.9e-24 116.3 192 38.5
BraA09t38260Z Brassica rapa HOM05D001286 ORTHO05D041492 6.4e-24 115.2 185 39.5
BraA09t38281Z Brassica rapa HOM05D001286 ORTHO05D000440 1.9e-12 77.0 109 43.1
CARHR139790 Cardamine hirsuta HOM05D001286 ORTHO05D000440 1.5e-09 67.4 172 30.2
Thhalv10023551m.g Eutrema salsugineum HOM05D001286 ORTHO05D000440 2.6e-09 66.6 178 28.1
Carub.0004s2747 Capsella rubella HOM05D001286 ORTHO05D000440 3.4e-09 66.2 181 30.9
Haze_19622 Corylus avellana HOM05D001286 ORTHO05D000440 9.9e-09 64.7 183 31.7
CARHR054340 Cardamine hirsuta HOM05D001286 ORTHO05D000440 2.2e-08 63.5 190 28.9
BcaB04g20176 Brassica carinata HOM05D001286 ORTHO05D000440 2.9e-08 63.2 178 29.8
AT3G18720 Arabidopsis thaliana HOM05D001286 ORTHO05D000440 4.9e-08 62.4 133 35.3
AL3G32070 Arabidopsis lyrata HOM05D001286 ORTHO05D000440 1.1e-07 61.2 187 26.2
A01p28080 Brassica napus HOM05D001286 ORTHO05D000440 1.4e-07 60.8 185 30.3
BraA01t02936Z Brassica rapa HOM05D001286 ORTHO05D000440 1.4e-07 60.8 185 30.3
arahy.Tifrunner.gnm1.ann1.2MM3YT Arachis hypogaea HOM05D001286 ORTHO05D000440 1.9e-07 60.5 181 29.3
arahy.Tifrunner.gnm1.ann1.4DR6J6 Arachis hypogaea HOM05D001286 ORTHO05D000440 1.9e-07 60.5 181 29.3
C01p35560 Brassica napus HOM05D001286 ORTHO05D000440 2.4e-07 60.1 178 26.4
BolC1t03516H Brassica oleracea HOM05D001286 ORTHO05D000440 2.4e-07 60.1 178 26.4
Manes.08G026100 Manihot esculenta HOM05D001286 ORTHO05D000440 2.4e-07 60.1 185 29.2
TPR.G9893 Trifolium pratense HOM05D001286 ORTHO05D000440 3.2e-07 59.7 184 28.3
BcaC09g49525 Brassica carinata HOM05D001286 ORTHO05D000440 4.2e-07 59.3 178 26.4
Psat6g080440 Pisum sativum HOM05D001286 ORTHO05D000440 4.2e-07 59.3 184 28.3
Sp2g05780 Schrenkiella parvula HOM05D001286 ORTHO05D000440 4.2e-07 59.3 116 34.5
Cfa016618 Carpinus fangiana HOM05D001286 ORTHO05D000440 5.4e-07 58.9 182 29.1
Ca_00899_v3 Cicer arietinum L. HOM05D001286 ORTHO05D000440 5.4e-07 58.9 184 28.8
A07p16390 Brassica napus HOM05D001286 ORTHO05D000440 9.3e-07 58.2 91 36.3
Dinv31694 Davidia involucrata HOM05D001286 ORTHO05D000440 9.3e-07 58.2 187 28.9
Cpa.g.sc5.10 Carica papaya HOM05D001286 ORTHO05D000440 1.2e-06 57.8 186 29.0
AUR62037031 Chenopodium quinoa HOM05D001286 ORTHO05D000440 1.2e-06 57.8 182 28.6
Haze_19623 Corylus avellana HOM05D001286 ORTHO05D000440 1.2e-06 57.8 181 28.7
Medtr1g059840 Medicago truncatula HOM05D001286 ORTHO05D000440 1.2e-06 57.8 181 29.3
BraA07t29366Z Brassica rapa HOM05D001286 ORTHO05D000440 2.1e-06 57.0 91 35.2
CANSAT64G2057 Cannabis sativa HOM05D001286 ORTHO05D000440 2.1e-06 57.0 182 28.0
AUR62006191 Chenopodium quinoa HOM05D001286 ORTHO05D000440 2.1e-06 57.0 182 28.0
BcaB05g22018 Brassica carinata HOM05D001286 ORTHO05D000440 2.7e-06 56.6 171 32.2
Prupe.7G109000 Prunus persica HOM05D001286 ORTHO05D000440 2.7e-06 56.6 115 33.9
EL10Ac7g16907 Beta vulgaris HOM05D001286 ORTHO05D000440 3.5e-06 56.2 182 28.0
Lj5g0005331 Lotus japonicus HOM05D001286 ORTHO05D000440 3.5e-06 56.2 184 25.5
Glyma.10G073700 Glycine max HOM05D001286 ORTHO05D000440 4.6e-06 55.8 184 27.7
Thecc.05G090300 Theobroma cacao HOM05D001286 ORTHO05D000440 4.6e-06 55.8 184 27.2


User provided reference genes

Program Settings