Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p04680 Brassica napus HOM05D006583 ORTHO05D008134 3.2e-50 201.4 100 100.0
BraA10t42732Z Brassica rapa HOM05D006583 ORTHO05D008134 6.8e-37 157.1 86 90.7
C08p02370 Brassica napus HOM05D006583 ORTHO05D008134 3.6e-22 108.2 77 72.7
BolC8t47029H Brassica oleracea HOM05D006583 ORTHO05D008134 3.6e-22 108.2 77 72.7
A08p36140 Brassica napus HOM05D006583 ORTHO05D008134 1.4e-21 106.3 77 71.4
BcaB03g13442 Brassica carinata HOM05D006583 ORTHO05D008134 1.8e-21 105.9 77 71.4
BraA08t35521Z Brassica rapa HOM05D006583 ORTHO05D008134 1.8e-21 105.9 77 71.4
AL1G16010 Arabidopsis lyrata HOM05D006583 ORTHO05D008134 4.0e-21 104.8 77 68.8
AT1G06060 Arabidopsis thaliana HOM05D006583 ORTHO05D008134 4.0e-21 104.8 77 68.8
Sp1g04870 Schrenkiella parvula HOM05D006583 ORTHO05D008134 4.0e-21 104.8 77 70.1
CARHR005580 Cardamine hirsuta HOM05D006583 ORTHO05D008134 5.3e-21 104.4 73 69.9
Carub.0001s0539 Capsella rubella HOM05D006583 ORTHO05D008134 5.8e-20 100.9 77 66.2
Thhalv10008762m.g Eutrema salsugineum HOM05D006583 ORTHO05D008134 7.6e-20 100.5 77 68.8
THA.LOC104798636 Tarenaya hassleriana HOM05D006583 ORTHO05D008134 1.2e-17 93.2 76 63.2
Potri.002G029700 Populus trichocarpa HOM05D006583 ORTHO05D008134 6.7e-16 87.4 77 58.4
Manes.18G019300 Manihot esculenta HOM05D006583 ORTHO05D008134 8.7e-16 87.0 77 57.1
TWI36G1724 Tripterygium wilfordii HOM05D006583 ORTHO05D008134 3.3e-15 85.1 76 57.9
Sabra05G0179700 Salix brachista HOM05D006583 ORTHO05D008134 5.6e-15 84.3 77 55.8
EL10Ac1g00579 Beta vulgaris HOM05D006583 ORTHO05D008134 7.4e-15 84.0 76 57.9
Sc02g0005320 Simmondsia chinensis HOM05D006583 ORTHO05D008134 9.6e-15 83.6 76 55.3
Dinv39470 Davidia involucrata HOM05D006583 ORTHO05D008134 1.6e-14 82.8 76 57.9
Cc10_g02290 Coffea canephora HOM05D006583 ORTHO05D008134 2.1e-14 82.4 76 57.9
Os01g0775600 Oryza sativa ssp. japonica HOM05D006583 ORTHO05D008134 2.8e-14 82.0 72 55.6
Haze_22568 Corylus avellana HOM05D006583 ORTHO05D008134 3.7e-14 81.6 76 56.6
Glyma.06G028400 Glycine max HOM05D006583 ORTHO05D008134 4.8e-14 81.3 71 59.2
Gohir.A01G113700 Gossypium hirsutum HOM05D006583 ORTHO05D008134 6.2e-14 80.9 76 56.6
Gohir.D01G101500 Gossypium hirsutum HOM05D006583 ORTHO05D008134 6.2e-14 80.9 76 56.6
Ciclev10002444m.g Citrus clementina HOM05D006583 ORTHO05D008134 8.1e-14 80.5 76 55.3
PGR031G1646 Punica granatum HOM05D006583 ORTHO05D008134 8.1e-14 80.5 76 56.6
arahy.Tifrunner.gnm1.ann1.IRD816 Arachis hypogaea HOM05D006583 ORTHO05D008134 1.4e-13 79.7 76 57.9
Phvul.009G013100 Phaseolus vulgaris HOM05D006583 ORTHO05D008134 1.4e-13 79.7 71 59.2
Thecc.08G035300 Theobroma cacao HOM05D006583 ORTHO05D008134 1.4e-13 79.7 76 56.6
VMungo1309G1713 Vigna mungo HOM05D006583 ORTHO05D008134 1.4e-13 79.7 71 59.2
MELO3C003787.2 Cucumis melo HOM05D006583 ORTHO05D008134 1.8e-13 79.3 76 53.9
CsaV3_3G045530 Cucumis sativus L. HOM05D006583 ORTHO05D008134 1.8e-13 79.3 76 53.9
Gorai.002G126000 Gossypium raimondii HOM05D006583 ORTHO05D008134 1.8e-13 79.3 76 55.3
Duzib093G0899 Durio zibethinus HOM05D006583 ORTHO05D008134 2.4e-13 79.0 76 53.9
Lsat_1_v5_gn_5_25641 Lactuca sativa HOM05D006583 ORTHO05D008134 2.4e-13 79.0 76 55.3
Eucgr.F01851 Eucalyptus grandis HOM05D006583 ORTHO05D008134 4.0e-13 78.2 76 51.3
ATR0665G303 Amborella trichopoda HOM05D006583 ORTHO05D008134 5.3e-13 77.8 71 52.1
Dinv31797 Davidia involucrata HOM05D006583 ORTHO05D008134 5.3e-13 77.8 76 55.3
Glyma.04G028200 Glycine max HOM05D006583 ORTHO05D008134 5.3e-13 77.8 71 59.2
Lalb_Chr23g0266401 Lupinus albus HOM05D006583 ORTHO05D008134 5.3e-13 77.8 71 57.7
SEGI_39793 Sequoiadendron giganteum HOM05D006583 ORTHO05D008134 6.9e-13 77.4 76 52.6
TAR376G0698 Trochodendron aralioides HOM05D006583 ORTHO05D008134 6.9e-13 77.4 76 55.3
Duzib041G0648 Durio zibethinus HOM05D006583 ORTHO05D008134 9.0e-13 77.0 71 56.3
CANSAT25G2309 Cannabis sativa HOM05D006583 ORTHO05D008134 1.2e-12 76.6 71 53.5
Lalb_Chr11g0062151 Lupinus albus HOM05D006583 ORTHO05D008134 1.2e-12 76.6 68 57.4
Sopen04g034500 Solanum pennellii HOM05D006583 ORTHO05D008134 1.2e-12 76.6 71 52.1
TWI56G0908 Tripterygium wilfordii HOM05D006583 ORTHO05D008134 1.5e-12 76.3 85 51.8
Zm00001eb369980 Zea mays HOM05D006583 ORTHO05D008134 2.0e-12 75.9 72 52.8
MSTRG.1241 Avicennia marina HOM05D006583 ORTHO05D008134 3.4e-12 75.1 76 52.6
HanXRQChr03g0069701 Helianthus annuus HOM05D006583 ORTHO05D008134 3.4e-12 75.1 76 52.6
QL02p010374 Quercus lobata HOM05D006583 ORTHO05D008134 3.4e-12 75.1 76 51.3
QL02p010412 Quercus lobata HOM05D006583 ORTHO05D008134 3.4e-12 75.1 76 51.3
Lj5g0011733 Lotus japonicus HOM05D006583 ORTHO05D008134 4.5e-12 74.7 71 54.9
Pp3c9_8180 Physcomitrium patens HOM05D006583 ORTHO05D008134 4.5e-12 74.7 72 52.8
GSVIVG01009797001 Vitis vinifera HOM05D006583 ORTHO05D008134 4.5e-12 74.7 76 53.9
Actinidia15372 Actinidia chinensis HOM05D006583 ORTHO05D008134 5.8e-12 74.3 76 53.9
Pp3c15_18970 Physcomitrium patens HOM05D006583 ORTHO05D008134 5.8e-12 74.3 76 52.6
Hma1.2p1_0469F.1_g158810 Hydrangea macrophylla HOM05D006583 ORTHO05D008134 7.6e-12 73.9 77 54.5
BcaB01g01410 Brassica carinata HOM05D006583 ORTHO05D008134 1.0e-11 73.6 45 75.6
HanXRQChr05g0149481 Helianthus annuus HOM05D006583 ORTHO05D008134 1.7e-11 72.8 86 52.3
MD15G1020700 Malus domestica HOM05D006583 ORTHO05D008134 1.7e-11 72.8 76 48.7
Medtr1g019870 Medicago truncatula HOM05D006583 ORTHO05D008134 1.7e-11 72.8 71 53.5
Rhsim06G0027600 Rhododendron simsii HOM05D006583 ORTHO05D008134 1.7e-11 72.8 76 51.3
CSS0045478 Camellia sinensis var. sinensis HOM05D006583 ORTHO05D008134 2.2e-11 72.4 76 52.6
Aqoxy5G01518 Aquilegia oxysepala HOM05D006583 ORTHO05D008134 3.8e-11 71.6 72 55.6
AUR62014454 Chenopodium quinoa HOM05D006583 ORTHO05D008134 3.8e-11 71.6 68 52.9
AUR62034544 Chenopodium quinoa HOM05D006583 ORTHO05D008134 3.8e-11 71.6 68 52.9
RcHm_v2.0_Chr6g0301961 Rosa chinensis HOM05D006583 ORTHO05D008134 3.8e-11 71.6 75 48.0
TPR.G13692 Trifolium pratense HOM05D006583 ORTHO05D008134 3.8e-11 71.6 71 53.5
CDE07G0605 Ceratophyllum demersum HOM05D006583 ORTHO05D008134 4.9e-11 71.2 76 55.3
FAN20G0107 Fragaria x ananassa HOM05D006583 ORTHO05D008134 4.9e-11 71.2 75 49.3
FvH4_2g38860 Fragaria vesca HOM05D006583 ORTHO05D008134 6.5e-11 70.9 75 49.3
PSO541G0494 Papaver somniferum HOM05D006583 ORTHO05D008134 8.4e-11 70.5 76 51.3
SGA_v2.0_scaffold11G05849 Striga asiatica HOM05D006583 ORTHO05D008134 8.4e-11 70.5 58 56.9
Ca_13385_v3 Cicer arietinum L. HOM05D006583 ORTHO05D008134 1.4e-10 69.7 71 52.1
ECA246G3248 Erigeron canadensis HOM05D006583 ORTHO05D008134 1.9e-10 69.3 76 51.3
SalBow7G0241 Salvia bowleyana HOM05D006583 ORTHO05D008134 1.9e-10 69.3 60 56.7
CDE06G0069 Ceratophyllum demersum HOM05D006583 ORTHO05D008134 2.5e-10 68.9 76 52.6
Psat6g006360 Pisum sativum HOM05D006583 ORTHO05D008134 3.2e-10 68.6 71 52.1
SGA_v2.0_scaffold201G41378 Striga asiatica HOM05D006583 ORTHO05D008134 3.2e-10 68.6 78 48.7
DCAR_009954 Daucus carota HOM05D006583 ORTHO05D008134 7.1e-10 67.4 68 52.9
PSO675G6535 Papaver somniferum HOM05D006583 ORTHO05D008134 7.1e-10 67.4 76 50.0
Mapoly0001s0037 Marchantia polymorpha HOM05D006583 ORTHO05D008134 9.3e-10 67.0 63 54.0
Oeu046226.1 Olea europaea HOM05D006583 ORTHO05D008134 9.3e-10 67.0 76 51.3
SEGI_23693 Sequoiadendron giganteum HOM05D006583 ORTHO05D008134 1.2e-09 66.6 62 54.8
SMO118G0197 Selaginella moellendorffii HOM05D006583 ORTHO05D008134 1.6e-09 66.2 71 49.3
HPP92_015882 Vanilla planifolia HOM05D006583 ORTHO05D008134 2.7e-09 65.5 76 46.1
CiPaw.07G155600 Carya illinoinensis HOM05D006583 ORTHO05D008134 3.5e-09 65.1 63 54.0
MD08G1023000 Malus domestica HOM05D006583 ORTHO05D008134 3.5e-09 65.1 71 45.1
Sabra02G0023600 Salix brachista HOM05D001685 ORTHO05D008134 3.5e-09 65.1 65 52.3
Lj4A32T64 Lonicera japonica HOM05D006583 ORTHO05D008134 6.0e-09 64.3 65 53.8
SGA_v2.0_scaffold11G05841 Striga asiatica HOM05D006583 ORTHO05D008134 1.8e-08 62.8 58 53.4
FAN15G3353 Fragaria x ananassa HOM05D006583 ORTHO05D008134 3.9e-08 61.6 64 48.4
Sed0026661 Sechium edule HOM05D004346 ORTHO05D009095 3.9e-08 61.6 63 50.8
Migut.C00777 Erythranthe guttata HOM05D001685 ORTHO05D009095 5.1e-08 61.2 63 50.8
Peaxi162Scf00189g00133 Petunia axillaris HOM05D001685 ORTHO05D009095 5.1e-08 61.2 59 52.5
TAR068G0005 Trochodendron aralioides HOM05D000284 ORTHO05D008134 5.1e-08 61.2 63 54.0
Solyc04g080900.3 Solanum lycopersicum HOM05D001685 ORTHO05D009095 8.7e-08 60.5 55 54.5
Atru.chr13.382 Acer truncatum HOM05D001685 ORTHO05D009095 1.1e-07 60.1 63 52.4
CAN.G851.29 Capsicum annuum HOM05D006583 ORTHO05D008134 1.1e-07 60.1 55 52.7
Hund26881 Selenicereus undatus HOM05D006583 ORTHO05D008134 1.1e-07 60.1 63 50.8
Nitab4.5_0001840g0010 Nicotiana tabacum HOM05D006583 ORTHO05D008134 1.5e-07 59.7 58 51.7
PGSC0003DMG401003705 Solanum tuberosum HOM05D006583 ORTHO05D008134 1.9e-07 59.3 55 52.7
unitig_578.g16694 Utricularia gibba HOM05D006583 ORTHO05D008134 4.3e-07 58.2 76 47.4
vmacro21691 Vaccinium macrocarpon HOM05D006583 ORTHO05D008134 7.4e-07 57.4 95 40.0
unitig_85.g27214 Utricularia gibba HOM05D006583 ORTHO05D008134 1.3e-06 56.6 71 50.7
ClCG05G018650 Citrullus lanatus HOM05D001685 ORTHO05D009095 2.8e-06 55.5 46 56.5
Glyma.14G070300 Glycine max HOM05D006583 ORTHO05D008134 2.8e-06 55.5 72 43.1
Glyma.17G254300 Glycine max HOM05D006583 ORTHO05D008134 4.8e-06 54.7 74 41.9
Ah.02g110970 Amaranthus hybridus HOM05D006583 ORTHO05D008134 8.2e-06 53.9 46 56.5


User provided reference genes

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