Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p04380 Brassica napus HOM05D000896 ORTHO05D041890 1.0e-66 256.5 122 100.0
BraA10t42705Z Brassica rapa HOM05D000896 ORTHO05D041890 1.0e-66 256.5 122 100.0
C05p03980 Brassica napus HOM05D000896 ORTHO05D000594 1.4e-44 183.0 104 86.5
BolC5t29176H Brassica oleracea HOM05D000896 ORTHO05D000594 1.4e-44 183.0 104 86.5
BcaC05g24358 Brassica carinata HOM05D000896 ORTHO05D000594 3.2e-44 181.8 104 86.5
BcaB02g06835 Brassica carinata HOM05D000896 ORTHO05D000594 6.0e-19 97.8 55 81.8
Sp4g07360 Schrenkiella parvula HOM05D000896 ORTHO05D000594 1.9e-09 66.2 96 40.6
Aa31LG5G5490 Aethionema arabicum HOM05D000896 ORTHO05D000594 2.5e-09 65.9 82 40.2
Aa31sc1610G20 Aethionema arabicum HOM05D000896 ORTHO05D000594 2.5e-09 65.9 82 40.2
CARHR005050 Cardamine hirsuta HOM05D000896 ORTHO05D000594 9.6e-09 63.9 79 44.3
SpUn0479_0020 Schrenkiella parvula HOM05D000896 ORTHO05D000594 1.6e-08 63.2 96 40.6
THA.LOC104827391 Tarenaya hassleriana HOM05D000896 ORTHO05D000594 1.6e-08 63.2 71 39.4
Sp1g04460 Schrenkiella parvula HOM05D000705 ORTHO05D002970 2.1e-08 62.8 96 41.7
BcaB06g28569 Brassica carinata HOM05D000896 ORTHO05D000594 3.7e-08 62.0 75 42.7
THA.LOC104827386 Tarenaya hassleriana HOM05D000896 ORTHO05D000594 3.7e-08 62.0 71 38.0
THA.LOC104827387 Tarenaya hassleriana HOM05D000896 ORTHO05D000594 3.7e-08 62.0 71 38.0
Aa31LG5G5500 Aethionema arabicum HOM05D000896 ORTHO05D000594 6.2e-08 61.2 79 43.0
Thhalv10009984m.g Eutrema salsugineum HOM05D000896 ORTHO05D000594 1.4e-07 60.1 80 43.8
Carub.0001s0530 Capsella rubella HOM05D000896 ORTHO05D000594 1.8e-07 59.7 78 38.5
AL1G15520 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 2.4e-07 59.3 80 40.0
BcaB06g28558 Brassica carinata HOM05D000896 ORTHO05D000594 2.4e-07 59.3 65 47.7
BcaB06g28546 Brassica carinata HOM05D000896 ORTHO05D000594 4.0e-07 58.5 63 47.6
BcaC02g07987 Brassica carinata HOM05D000896 ORTHO05D000594 6.9e-07 57.8 116 31.9
BcaB06g28445 Brassica carinata HOM05D000896 ORTHO05D000594 9.0e-07 57.4 65 46.2
BcaC02g07964 Brassica carinata HOM05D000896 ORTHO05D000594 9.0e-07 57.4 59 44.1
C04p61400 Brassica napus HOM05D000896 ORTHO05D000594 9.0e-07 57.4 59 44.1
Sed0019902 Sechium edule HOM05D000896 ORTHO05D000594 9.0e-07 57.4 77 42.9
BcaC02g07983 Brassica carinata HOM05D000896 ORTHO05D000594 1.2e-06 57.0 84 40.5
BcaC02g07988 Brassica carinata HOM05D000896 ORTHO05D000594 1.2e-06 57.0 84 40.5
C04p61050 Brassica napus HOM05D000896 ORTHO05D000594 1.2e-06 57.0 84 40.5
BolC4t27592H Brassica oleracea HOM05D000896 ORTHO05D000594 1.2e-06 57.0 84 40.5
Carub.0004s1302 Capsella rubella HOM05D000896 ORTHO05D000594 1.2e-06 57.0 82 41.5
AL4G15340 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 1.5e-06 56.6 103 34.0
Thhalv10012233m.g Eutrema salsugineum HOM05D000896 ORTHO05D000594 1.5e-06 56.6 93 39.8
Sp4g14210 Schrenkiella parvula HOM05D000896 ORTHO05D000594 1.5e-06 56.6 65 43.1
Carub.0003s2555 Capsella rubella HOM05D000896 ORTHO05D000594 2.0e-06 56.2 81 37.0
C04p61020 Brassica napus HOM05D000896 ORTHO05D000594 2.6e-06 55.8 89 39.3
THA.LOC104826207 Tarenaya hassleriana HOM05D000896 ORTHO05D000594 2.6e-06 55.8 64 37.5
BolC4t27590H Brassica oleracea HOM05D000896 ORTHO05D000594 3.4e-06 55.5 57 49.1
BcaC02g11294 Brassica carinata HOM05D000896 ORTHO05D000594 4.5e-06 55.1 62 41.9
C04p17890 Brassica napus HOM05D000896 ORTHO05D000594 4.5e-06 55.1 75 34.7
BolC4t23337H Brassica oleracea HOM05D000896 ORTHO05D000594 4.5e-06 55.1 75 34.7
BolC4t27593H Brassica oleracea HOM05D000896 ORTHO05D000594 4.5e-06 55.1 75 41.3
AT2G31420 Arabidopsis thaliana HOM05D000896 ORTHO05D000594 5.8e-06 54.7 79 44.3
BraA04t17973Z Brassica rapa HOM05D000896 ORTHO05D000594 5.8e-06 54.7 80 38.8
Sed0008121 Sechium edule HOM05D000896 ORTHO05D000594 5.8e-06 54.7 77 40.3
Sed0016322 Sechium edule HOM05D000896 ORTHO05D000594 5.8e-06 54.7 79 39.2
BcaC02g11280 Brassica carinata HOM05D000896 ORTHO05D000594 7.6e-06 54.3 75 34.7
A04p24380 Brassica napus HOM05D000896 ORTHO05D000594 7.6e-06 54.3 59 45.8
C04p18170 Brassica napus HOM05D000896 ORTHO05D000594 7.6e-06 54.3 75 34.7
C04p61100 Brassica napus HOM05D000896 ORTHO05D000594 7.6e-06 54.3 80 38.8
BolC4t23373H Brassica oleracea HOM05D000896 ORTHO05D000594 7.6e-06 54.3 75 34.7
BraA04t17955Z Brassica rapa HOM05D000896 ORTHO05D000594 7.6e-06 54.3 59 45.8


User provided reference genes

Program Settings