Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p04050 Brassica napus HOM05D002385 ORTHO05D002245 2.4e-31 138.3 73 100.0
BolC5t29144H Brassica oleracea HOM05D002385 ORTHO05D002245 4.0e-26 120.9 73 82.2
AT1G05340 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 8.8e-26 119.8 73 83.6
C05p03670 Brassica napus HOM05D002385 ORTHO05D002245 1.5e-25 119.0 73 80.8
BraA10t42676Z Brassica rapa HOM05D002385 ORTHO05D002245 2.6e-25 118.2 73 79.5
Thhalv10009262m.g Eutrema salsugineum HOM05D002385 ORTHO05D002245 2.6e-25 118.2 74 79.7
Sp1g04210 Schrenkiella parvula HOM05D002385 ORTHO05D002245 2.6e-25 118.2 73 82.2
Carub.0001s0465 Capsella rubella HOM05D002385 ORTHO05D002245 1.7e-24 115.5 73 76.7
AL1G15140 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 2.2e-24 115.2 73 84.9
CARHR004830 Cardamine hirsuta HOM05D002385 ORTHO05D002245 3.7e-24 114.4 73 78.1
Aa31LG5G4320 Aethionema arabicum HOM05D002385 ORTHO05D002245 1.0e-18 96.3 74 63.5
AL4G27550 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 1.3e-16 89.4 74 63.5
AT2G32210 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 1.7e-16 89.0 74 63.5
BcaB02g10483 Brassica carinata HOM05D002385 ORTHO05D002245 4.9e-16 87.4 74 62.2
A05p12990 Brassica napus HOM05D002385 ORTHO05D002245 4.9e-16 87.4 74 62.2
BraA05t20239Z Brassica rapa HOM05D002385 ORTHO05D002245 4.9e-16 87.4 74 62.2
Sp4g14580 Schrenkiella parvula HOM05D002385 ORTHO05D002245 8.3e-16 86.7 74 63.5
Sp4g14570 Schrenkiella parvula HOM05D002385 ORTHO05D002245 1.1e-15 86.3 74 62.2
THA.LOC109116124 Tarenaya hassleriana HOM05D002385 ORTHO05D002245 1.1e-15 86.3 74 56.8
BcaC02g11342 Brassica carinata HOM05D002385 ORTHO05D002245 1.8e-15 85.5 74 60.8
C04p17420 Brassica napus HOM05D002385 ORTHO05D002245 1.8e-15 85.5 74 60.8
CARHR125980 Cardamine hirsuta HOM05D002385 ORTHO05D002245 1.8e-15 85.5 76 60.5
Carub.0004s1351 Capsella rubella HOM05D002385 ORTHO05D002245 2.4e-15 85.1 75 60.0
BcaC02g07945 Brassica carinata HOM05D002385 ORTHO05D002245 1.6e-14 82.4 74 59.5
C04p61680 Brassica napus HOM05D002385 ORTHO05D002245 1.6e-14 82.4 74 59.5
BcaB06g28585 Brassica carinata HOM05D002385 ORTHO05D002245 4.6e-14 80.9 74 58.1
BraA04t17993Z Brassica rapa HOM05D002385 ORTHO05D002245 5.9e-14 80.5 74 58.1
AL4G27570 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 1.5e-12 75.9 77 58.4
THA.LOC104826161 Tarenaya hassleriana HOM05D002385 ORTHO05D002245 1.9e-12 75.5 74 55.4
AT2G32200 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 8.0e-11 70.1 75 53.3
Dinv19617 Davidia involucrata HOM05D002385 ORTHO05D002245 8.9e-10 66.6 71 49.3
Aa31LG1G19350 Aethionema arabicum HOM05D002385 ORTHO05D002245 1.2e-09 66.2 57 59.6
THA.LOC104822278 Tarenaya hassleriana HOM05D002385 ORTHO05D002245 7.5e-09 63.5 74 47.3
C05p41120 Brassica napus HOM05D002385 ORTHO05D002245 9.8e-09 63.2 67 50.7
BolC5t32855H Brassica oleracea HOM05D002385 ORTHO05D002245 9.8e-09 63.2 67 50.7
TWI60G1403 Tripterygium wilfordii HOM05D002385 ORTHO05D002245 1.3e-08 62.8 75 48.0
AT2G32190 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 2.2e-08 62.0 60 58.3
CANSAT64G2629 Cannabis sativa HOM05D002385 ORTHO05D002245 2.9e-08 61.6 74 48.6
Carub.0004s1352 Capsella rubella HOM05D002385 ORTHO05D002245 2.9e-08 61.6 74 45.9
Oeu056976.2 Olea europaea HOM05D002385 ORTHO05D002245 3.7e-08 61.2 84 41.7
Migut.M01554 Erythranthe guttata HOM05D002385 ORTHO05D002245 4.9e-08 60.8 82 45.1
Thecc.07G152000 Theobroma cacao HOM05D021429 ORTHO05D022417 2.4e-07 58.5 59 47.5
Glyma.08G171400 Glycine max HOM05D002385 ORTHO05D002245 3.2e-07 58.2 76 43.4
Atru.chr11.2673 Acer truncatum HOM05D002385 ORTHO05D002245 4.1e-07 57.8 76 47.4
Potri.016G019201 Populus trichocarpa HOM05D002385 ORTHO05D002245 4.1e-07 57.8 72 45.8
QL11p017947 Quercus lobata HOM05D002385 ORTHO05D002245 1.2e-06 56.2 44 59.1
FAN14G0168 Fragaria x ananassa HOM05D002385 ORTHO05D002245 1.6e-06 55.8 68 48.5
Duzib235G0963 Durio zibethinus HOM05D014462 ORTHO05D002245 2.0e-06 55.5 96 36.5
GSVIVG01015779001 Vitis vinifera HOM05D002385 ORTHO05D002245 3.5e-06 54.7 76 40.8
BcaC09g49159 Brassica carinata HOM05D002385 ORTHO05D002245 7.8e-06 53.5 73 47.9
Potri.006G021600 Populus trichocarpa HOM05D002385 ORTHO05D002245 7.8e-06 53.5 72 41.7


User provided reference genes

Program Settings