Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p03330 Brassica napus HOM05D000595 ORTHO05D008454 4.6e-266 920.6 449 100.0
BraA10t42609Z Brassica rapa HOM05D000595 ORTHO05D008454 4.6e-266 920.6 449 100.0
BolC5t29087H Brassica oleracea HOM05D000595 ORTHO05D008454 5.4e-259 897.1 449 97.8
C05p03050 Brassica napus HOM05D000595 ORTHO05D008454 3.9e-257 891.0 451 97.6
Carub.0001s0414 Capsella rubella HOM05D000595 ORTHO05D008454 6.4e-244 847.0 453 91.8
Thhalv10007628m.g Eutrema salsugineum HOM05D000595 ORTHO05D008454 1.6e-242 842.4 449 92.0
AL1G14620 Arabidopsis lyrata HOM05D000595 ORTHO05D008454 2.7e-242 841.6 449 91.8
AT1G04900 Arabidopsis thaliana HOM05D000595 ORTHO05D008454 1.3e-239 832.8 449 91.5
Aa31LG1G19900 Aethionema arabicum HOM05D000595 ORTHO05D008454 4.1e-230 801.2 453 86.8
CARHR004300 Cardamine hirsuta HOM05D000595 ORTHO05D008454 1.3e-223 779.6 454 86.1
THA.LOC104801033 Tarenaya hassleriana HOM05D000595 ORTHO05D008454 1.8e-214 749.2 415 86.5
Prupe.1G006900 Prunus persica HOM05D000595 ORTHO05D008454 1.5e-200 703.0 453 73.7
Potri.001G314700 Populus trichocarpa HOM05D000595 ORTHO05D008454 1.4e-198 696.4 414 80.4
MD04G1008200 Malus domestica HOM05D000595 ORTHO05D008454 3.1e-198 695.3 419 77.8
Gorai.011G158900 Gossypium raimondii HOM05D000595 ORTHO05D008454 1.7e-196 689.5 447 75.6
Atru.chr4.1710 Acer truncatum HOM05D000595 ORTHO05D008454 2.9e-196 688.7 418 79.2
RcHm_v2.0_Chr4g0415411 Rosa chinensis HOM05D000595 ORTHO05D008454 3.8e-196 688.3 451 73.6
PGR083G2732 Punica granatum HOM05D000595 ORTHO05D008454 8.5e-196 687.2 416 78.6
Nitab4.5_0000676g0200 Nicotiana tabacum HOM05D000595 ORTHO05D008454 1.6e-194 682.9 448 74.6
Thecc.04G204800 Theobroma cacao HOM05D000595 ORTHO05D008454 2.1e-194 682.6 418 77.8
Sed0004774 Sechium edule HOM05D000595 ORTHO05D008454 2.7e-194 682.2 421 77.4
Psat1g165160 Pisum sativum HOM05D000595 ORTHO05D008454 6.1e-194 681.0 430 74.4
Ca_00886_v3 Cicer arietinum L. HOM05D000595 ORTHO05D001274 1.0e-193 680.2 419 76.1
Sp1g03740 Schrenkiella parvula HOM05D000595 ORTHO05D008454 1.4e-193 679.9 400 86.0
Duzib151G0403 Durio zibethinus HOM05D000595 ORTHO05D008454 1.8e-193 679.5 418 78.2
TPR.G22264 Trifolium pratense HOM05D000595 ORTHO05D008454 1.8e-193 679.5 434 74.0
TWI53G1083 Tripterygium wilfordii HOM05D000595 ORTHO05D008454 1.8e-193 679.5 421 77.4
arahy.Tifrunner.gnm1.ann1.897VZR Arachis hypogaea HOM05D000595 ORTHO05D008454 5.2e-193 677.9 428 75.2
arahy.Tifrunner.gnm1.ann1.G7HRZN Arachis hypogaea HOM05D000595 ORTHO05D008454 5.2e-193 677.9 428 75.2
Eucgr.H02785 Eucalyptus grandis HOM05D000595 ORTHO05D008454 5.2e-193 677.9 424 75.0
Peaxi162Scf00652g00421 Petunia axillaris HOM05D000595 ORTHO05D008454 1.5e-192 676.4 419 76.6
Lj6g0010121 Lotus japonicus HOM05D000595 ORTHO05D008454 2.0e-192 676.0 449 72.4
CAN.G767.41 Capsicum annuum HOM05D000595 ORTHO05D008454 4.4e-192 674.9 422 75.8
Dinv29591 Davidia involucrata HOM05D000595 ORTHO05D008454 7.5e-192 674.1 422 77.0
VMungo0540G0041 Vigna mungo HOM05D000595 ORTHO05D001274 7.5e-192 674.1 422 74.4
CsaV3_1G042950 Cucumis sativus L. HOM05D000595 ORTHO05D008454 1.3e-191 673.3 424 76.2
Nn1g07860 Nelumbo nucifera HOM05D000595 ORTHO05D008454 1.3e-191 673.3 422 75.4
FvH4_4g15840 Fragaria vesca HOM05D000595 ORTHO05D008454 1.7e-191 672.9 433 73.9
Nitab4.5_0000850g0080 Nicotiana tabacum HOM05D000595 ORTHO05D008454 2.8e-191 672.2 458 72.3
Nitab4.5_0005206g0070 Nicotiana tabacum HOM05D000595 ORTHO05D008454 1.1e-190 670.2 467 71.3
HanXRQChr07g0185731 Helianthus annuus HOM05D000595 ORTHO05D008454 1.4e-190 669.8 424 75.9
Glyma.15G133500 Glycine max HOM05D000595 ORTHO05D008454 4.1e-190 668.3 421 74.6
Sopen12g033140 Solanum pennellii HOM05D000595 ORTHO05D008454 5.4e-190 667.9 450 72.9
Sabra16G0199100 Salix brachista HOM05D000595 ORTHO05D008454 9.1e-190 667.2 483 69.6
Solyc12g098360.2 Solanum lycopersicum HOM05D000595 ORTHO05D008454 1.2e-189 666.8 450 72.9
Phvul.006G125200 Phaseolus vulgaris HOM05D000595 ORTHO05D008454 2.7e-189 665.6 421 74.6
Lj6C558G7 Lonicera japonica HOM05D000595 ORTHO05D008454 4.5e-189 664.8 419 77.3
Lalb_Chr15g0088911 Lupinus albus HOM05D000595 ORTHO05D008454 5.9e-189 664.5 420 75.5
Cc03_g07770 Coffea canephora HOM05D000595 ORTHO05D008454 7.7e-189 664.1 455 71.0
CSS0010328 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D008454 2.3e-188 662.5 409 77.8
ClCG05G003330 Citrullus lanatus HOM05D000595 ORTHO05D008454 3.8e-188 661.8 421 76.0
FAN12G2005 Fragaria x ananassa HOM05D000595 ORTHO05D008454 8.6e-188 660.6 425 73.9
Sc13g0000130 Simmondsia chinensis HOM05D000595 ORTHO05D008454 8.6e-188 660.6 448 70.3
PSO063G0672 Papaver somniferum HOM05D000595 ORTHO05D008454 1.1e-187 660.2 430 72.3
PSO017G5401 Papaver somniferum HOM05D000595 ORTHO05D008454 1.9e-187 659.4 449 69.9
Aqoxy2G03878 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 2.3e-185 652.5 423 73.3
Gohir.A10G123700 Gossypium hirsutum HOM05D000595 ORTHO05D008454 8.9e-185 650.6 453 72.2
TAR636G3484 Trochodendron aralioides HOM05D000595 ORTHO05D008454 2.0e-184 649.4 420 74.0
MELO3C015176.2 Cucumis melo HOM05D000595 ORTHO05D008454 4.1e-182 641.7 465 69.0
Migut.N00379 Erythranthe guttata HOM05D000595 ORTHO05D008454 1.9e-179 632.9 420 71.7
Ciclev10005247m.g Citrus clementina HOM05D000595 ORTHO05D008454 9.2e-174 614.0 362 80.4
EL10Ac3g07487 Beta vulgaris HOM05D000595 ORTHO05D008454 1.3e-172 610.1 429 69.5
COL.COLO4_09879 Corchorus olitorius HOM05D000595 ORTHO05D008454 8.6e-172 607.4 368 77.7
Gohir.D10G142300 Gossypium hirsutum HOM05D000595 ORTHO05D008454 8.9e-169 597.4 358 79.9
Actinidia37010 Actinidia chinensis HOM05D000595 ORTHO05D008454 1.2e-168 597.0 389 74.0
Rhsim09G0055700 Rhododendron simsii HOM05D000595 ORTHO05D008454 4.4e-168 595.1 595 54.8
HPP92_008949 Vanilla planifolia HOM05D000595 ORTHO05D008454 2.2e-167 592.8 451 65.2
Ah.13g078130 Amaranthus hybridus HOM05D000595 ORTHO05D008454 1.4e-166 590.1 406 71.2
Os01g0911900 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D008454 7.0e-166 587.8 423 66.2
FAN07G1333 Fragaria x ananassa HOM05D000595 ORTHO05D008454 9.2e-166 587.4 415 69.6
vmacro00479 Vaccinium macrocarpon HOM05D000595 ORTHO05D008454 9.2e-166 587.4 547 58.1
ECA233G5324 Erigeron canadensis HOM05D000595 ORTHO05D008454 2.1e-165 586.3 378 74.9
ATR1145G018 Amborella trichopoda HOM05D000595 ORTHO05D008454 6.0e-165 584.7 406 67.5
Lsat_1_v5_gn_6_60501 Lactuca sativa HOM05D000595 ORTHO05D008454 4.3e-163 578.6 381 73.2
FAN19G1967 Fragaria x ananassa HOM05D000595 ORTHO05D008454 1.2e-157 560.5 435 65.5
Haze_11606 Corylus avellana HOM05D000595 ORTHO05D008454 1.6e-157 560.1 389 70.4
DCAR_002262 Daucus carota HOM05D000595 ORTHO05D008454 2.1e-146 523.1 358 71.2
Medtr2g031240 Medicago truncatula HOM05D000595 ORTHO05D008454 4.7e-146 521.9 357 69.2
Manes.15G053200 Manihot esculenta HOM05D000595 ORTHO05D008454 1.4e-145 520.4 312 78.2
QL06p024408 Quercus lobata HOM05D000595 ORTHO05D008454 1.7e-143 513.5 320 75.6
AUR62020816 Chenopodium quinoa HOM05D000595 ORTHO05D008454 1.1e-142 510.8 378 66.7
GSVIVG01000528001 Vitis vinifera HOM05D000595 ORTHO05D008454 3.0e-140 502.7 355 69.6
Lj6A570G15 Lonicera japonica HOM05D000595 ORTHO05D008454 1.4e-134 483.8 425 60.5
SGA_v2.0_scaffold216G42389 Striga asiatica HOM05D000595 ORTHO05D008454 4.2e-134 482.3 340 68.5
CiPaw.01G121900 Carya illinoinensis HOM05D000595 ORTHO05D008454 2.3e-124 449.9 285 75.8
AUR62032918 Chenopodium quinoa HOM05D000595 ORTHO05D008454 1.4e-121 440.7 373 60.3
Pp3c9_4240 Physcomitrium patens HOM05D000595 ORTHO05D008454 2.4e-113 413.3 421 50.1
AagrBONN_evm.TU.Sc2ySwM_344.3272 Anthoceros agrestis HOM05D000595 ORTHO05D008454 4.5e-112 409.1 404 52.2
Mapoly0090s0077 Marchantia polymorpha HOM05D000595 ORTHO05D008454 5.0e-111 405.6 409 51.1
SMO367G0911 Selaginella moellendorffii HOM05D000595 ORTHO05D008454 6.1e-109 398.7 404 48.5
unitig_744.g24024 Utricularia gibba HOM05D000595 ORTHO05D008454 6.3e-106 388.7 315 61.3
Cpa.g.sc59.134 Carica papaya HOM05D000595 ORTHO05D008454 8.5e-103 378.3 234 76.1
Zm00001eb143660 Zea mays HOM05D000595 ORTHO05D008454 8.8e-84 315.1 221 67.0
FvH4_1g23291 Fragaria vesca HOM05D000595 ORTHO05D008454 3.7e-82 309.7 200 75.0
SEGI_10928 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 2.4e-81 307.0 230 64.8
MCO01G355 Micromonas commoda HOM05D000595 ORTHO05D008454 1.2e-64 251.5 427 37.2
PRCOL_00005088 Prasinoderma coloniale HOM05D000595 ORTHO05D008454 2.1e-61 240.7 395 37.5
CiPaw.01G121800 Carya illinoinensis HOM05D000595 ORTHO05D008454 2.3e-60 237.3 138 79.0
FAN17G1124 Fragaria x ananassa HOM05D000595 ORTHO05D008454 3.2e-57 226.9 127 83.5
Actinidia33191 Actinidia chinensis HOM05D000595 ORTHO05D008454 3.0e-55 220.3 171 66.7
Oeu016734.1 Olea europaea HOM05D000595 ORTHO05D008454 1.2e-43 181.8 226 47.3
Cre13.g584700 Chlamydomonas reinhardtii HOM05D000595 ORTHO05D008454 1.4e-41 174.9 410 29.8
CBR_g19088 Chara braunii HOM05D000019 ORTHO05D000048 1.2e-40 171.8 179 46.9
Cfa022406 Carpinus fangiana HOM05D000595 ORTHO05D008454 1.3e-39 168.3 435 31.3
GSVIVG01000526001 Vitis vinifera HOM05D000595 ORTHO05D008454 4.0e-36 156.8 89 83.1
CsaV3_6G039270 Cucumis sativus L. HOM05D000595 ORTHO05D008454 2.9e-34 150.6 89 74.2
QL06p024418 Quercus lobata HOM05D000595 ORTHO05D008454 4.6e-32 143.3 126 57.1
EL10Ac4g09027 Beta vulgaris HOM05D000595 ORTHO05D008454 2.5e-30 137.5 114 59.6
AagrBONN_evm.TU.Sc2ySwM_368.462 Anthoceros agrestis HOM05D000595 ORTHO05D006346 1.2e-27 128.6 122 53.3
CsaV3_6G039250 Cucumis sativus L. HOM05D000595 ORTHO05D008454 1.0e-23 115.5 72 69.4
Nn1g07859 Nelumbo nucifera HOM05D000595 ORTHO05D008454 1.6e-21 108.2 84 65.5
unitig_744.g24023 Utricularia gibba HOM05D000595 ORTHO05D008454 4.9e-18 96.7 65 70.8
AUR62032919 Chenopodium quinoa HOM05D000595 ORTHO05D008454 6.0e-16 89.7 45 91.1
SEGI_41312 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 3.3e-14 84.0 56 64.3
CDE09G0179 Ceratophyllum demersum HOM05D000595 ORTHO05D008454 1.6e-13 81.6 72 55.6
BcaB02g06893 Brassica carinata HOM05D000595 ORTHO05D008454 1.1e-12 79.0 50 80.0
SEGI_06009 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 3.0e-07 60.8 59 47.5
A03p03910 Brassica napus HOM05D036078 ORTHO05D008454 3.9e-07 60.5 37 78.4
C03p02090 Brassica napus HOM05D036078 ORTHO05D008454 3.9e-07 60.5 37 78.4
Actinidia33192 Actinidia chinensis HOM05D000595 ORTHO05D008454 1.5e-06 58.5 35 80.0
Aqoxy3G00773 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 1.5e-06 58.5 53 47.2


User provided reference genes

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