Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p02120 Brassica napus HOM05D006115 ORTHO05D007528 4.4e-87 324.7 176 100.0
BolC5t28981H Brassica oleracea HOM05D006115 ORTHO05D007528 7.0e-85 317.4 176 97.2
BcaC05g24519 Brassica carinata HOM05D006115 ORTHO05D007528 2.0e-84 315.8 176 97.7
C05p02030 Brassica napus HOM05D006115 ORTHO05D007528 2.0e-84 315.8 176 97.7
BcaB02g06915 Brassica carinata HOM05D006115 ORTHO05D007528 4.5e-76 288.1 177 90.4
Sp1g02510 Schrenkiella parvula HOM05D006115 ORTHO05D007528 1.3e-75 286.6 175 89.7
CARHR002940 Cardamine hirsuta HOM05D006115 ORTHO05D007528 7.2e-74 280.8 176 88.1
AL1G13100 Arabidopsis lyrata HOM05D006115 ORTHO05D007528 2.1e-73 279.3 176 86.9
AT1G03600 Arabidopsis thaliana HOM05D006115 ORTHO05D007528 2.3e-72 275.8 176 85.8
A08p37300 Brassica napus HOM05D006115 ORTHO05D007528 2.0e-71 272.7 178 87.1
BraA10t42481Z Brassica rapa HOM05D006115 ORTHO05D007528 2.6e-71 272.3 176 86.4
BolC8t46868H Brassica oleracea HOM05D006115 ORTHO05D007528 7.5e-71 270.8 177 85.9
BcaC07g36953 Brassica carinata HOM05D006115 ORTHO05D007528 1.3e-70 270.0 179 86.6
C08p00700 Brassica napus HOM05D006115 ORTHO05D007528 1.3e-70 270.0 179 86.6
Thhalv10008901m.g Eutrema salsugineum HOM05D006115 ORTHO05D007528 1.3e-70 270.0 177 86.4
BraA08t35627Z Brassica rapa HOM05D006115 ORTHO05D007528 7.0e-69 264.2 178 83.7
Carub.0001s0272 Capsella rubella HOM05D006115 ORTHO05D007528 1.0e-67 260.4 176 84.1
Aa31LG1G20930 Aethionema arabicum HOM05D006115 ORTHO05D007528 2.3e-56 222.6 176 72.2
Ciclev10016927m.g Citrus clementina HOM05D006115 ORTHO05D007528 8.6e-51 204.1 177 65.5
Gohir.A01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.6e-49 199.9 172 67.4
Potri.005G206200 Populus trichocarpa HOM05D006115 ORTHO05D007528 4.7e-49 198.4 168 67.9
ClCG02G001140 Citrullus lanatus HOM05D006115 ORTHO05D007528 8.0e-49 197.6 136 78.7
Duzib132G1267 Durio zibethinus HOM05D006115 ORTHO05D007528 8.0e-49 197.6 175 65.7
COL.COLO4_35403 Corchorus olitorius HOM05D006115 ORTHO05D007528 6.8e-48 194.5 175 63.4
Sabra05G0156800 Salix brachista HOM05D006115 ORTHO05D007528 8.9e-48 194.1 168 66.1
Gohir.D01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 2.0e-47 193.0 173 65.3
Lalb_Chr24g0399841 Lupinus albus HOM05D006115 ORTHO05D007528 2.0e-47 193.0 179 60.9
THA.LOC104827374 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 2.0e-47 193.0 171 66.1
Gorai.002G017600 Gossypium raimondii HOM05D006115 ORTHO05D007528 2.6e-47 192.6 173 65.3
Manes.08G098700 Manihot esculenta HOM05D006115 ORTHO05D007528 2.6e-47 192.6 179 63.7
Potri.002G056300 Populus trichocarpa HOM05D006115 ORTHO05D007528 4.4e-47 191.8 173 65.9
Sabra02G0045600 Salix brachista HOM05D006115 ORTHO05D007528 9.8e-47 190.7 181 63.0
Sed0009578 Sechium edule HOM05D006115 ORTHO05D007528 2.9e-46 189.1 173 63.0
Sed0024793 Sechium edule HOM05D006115 ORTHO05D007528 2.9e-46 189.1 175 62.9
Cfa014568 Carpinus fangiana HOM05D006115 ORTHO05D007528 3.7e-46 188.7 180 61.1
MELO3C018748.2 Cucumis melo HOM05D006115 ORTHO05D007528 3.7e-46 188.7 176 63.1
Eucgr.K00947 Eucalyptus grandis HOM05D006115 ORTHO05D007528 3.7e-46 188.7 176 62.5
Atru.chr6.3034 Acer truncatum HOM05D006115 ORTHO05D007528 8.3e-46 187.6 188 61.7
Peaxi162Scf00610g00313 Petunia axillaris HOM05D006115 ORTHO05D007528 1.4e-45 186.8 176 64.2
Peaxi162Scf00132g00062 Petunia axillaris HOM05D006115 ORTHO05D007528 2.4e-45 186.0 177 63.3
Sopen07g028230 Solanum pennellii HOM05D006115 ORTHO05D007528 3.2e-45 185.7 173 63.6
Lj1P733T48 Lonicera japonica HOM05D006115 ORTHO05D007528 4.1e-45 185.3 125 76.0
MBI02_g19258_MAGBIO Magnolia biondii HOM05D006115 ORTHO05D007528 4.1e-45 185.3 165 63.6
MD17G1079700 Malus domestica HOM05D006115 ORTHO05D007528 4.1e-45 185.3 180 62.2
PGR142G3842 Punica granatum HOM05D006115 ORTHO05D007528 4.1e-45 185.3 183 56.8
Lalb_Chr14g0366761 Lupinus albus HOM05D006115 ORTHO05D007528 5.4e-45 184.9 176 61.9
TWI75G0783 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 5.4e-45 184.9 174 62.6
Gohir.A12G137300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 7.0e-45 184.5 175 61.7
Hma1.2p1_0875F.1_g231400 Hydrangea macrophylla HOM05D006115 ORTHO05D007528 7.0e-45 184.5 174 63.2
DCAR_019192 Daucus carota HOM05D006115 ORTHO05D007528 9.2e-45 184.1 179 62.0
CSS0015532 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 1.2e-44 183.7 170 62.4
CSS0031699 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 1.2e-44 183.7 170 62.4
CsaV3_7G004300 Cucumis sativus L. HOM05D006115 ORTHO05D007528 1.2e-44 183.7 176 61.4
HPP92_017628 Vanilla planifolia HOM05D006115 ORTHO05D007528 2.0e-44 183.0 143 68.5
Rhsim06G0148500 Rhododendron simsii HOM05D006115 ORTHO05D007528 2.7e-44 182.6 171 63.2
MD09G1090500 Malus domestica HOM05D006115 ORTHO05D007528 3.5e-44 182.2 178 61.2
AUR62041946 Chenopodium quinoa HOM05D006115 ORTHO05D007528 4.6e-44 181.8 182 57.7
Prupe.3G235100 Prunus persica HOM05D006115 ORTHO05D007528 4.6e-44 181.8 175 63.4
Medtr2g090200 Medicago truncatula HOM05D006115 ORTHO05D007528 6.0e-44 181.4 176 60.8
Nitab4.5_0001090g0130 Nicotiana tabacum HOM05D006115 ORTHO05D007528 6.0e-44 181.4 180 63.3
Gohir.D12G141300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.0e-43 180.6 110 80.9
Gorai.008G152600 Gossypium raimondii HOM05D006115 ORTHO05D007528 1.0e-43 180.6 110 80.9
Psat7g036720 Pisum sativum HOM05D006115 ORTHO05D007528 1.3e-43 180.3 174 60.9
Glyma.13G299200 Glycine max HOM05D006115 ORTHO05D007528 1.7e-43 179.9 112 81.2
Lj3g0001000 Lotus japonicus HOM05D006115 ORTHO05D007528 1.7e-43 179.9 178 58.4
Nitab4.5_0005380g0050 Nicotiana tabacum HOM05D006115 ORTHO05D007528 1.7e-43 179.9 184 62.0
PGSC0003DMG400018360 Solanum tuberosum HOM05D006115 ORTHO05D007528 1.7e-43 179.9 172 63.4
Glyma.12G202500 Glycine max HOM05D006115 ORTHO05D007528 2.3e-43 179.5 136 69.9
CANSAT64G2665 Cannabis sativa HOM05D006115 ORTHO05D007528 3.0e-43 179.1 182 61.0
CiPaw.04G123900 Carya illinoinensis HOM05D006115 ORTHO05D007528 3.0e-43 179.1 181 59.7
Lj8P115T48 Lonicera japonica HOM05D006115 ORTHO05D007528 3.0e-43 179.1 115 78.3
Solyc07g054290.1 Solanum lycopersicum HOM05D006115 ORTHO05D007528 3.0e-43 179.1 188 60.1
MSTRG.12305 Avicennia marina HOM05D006115 ORTHO05D007528 5.0e-43 178.3 176 61.4
Migut.H01055 Erythranthe guttata HOM05D006115 ORTHO05D007528 5.0e-43 178.3 184 60.9
Actinidia09875 Actinidia chinensis HOM05D006115 ORTHO05D007528 6.6e-43 177.9 132 71.2
Duzib248G0317 Durio zibethinus HOM05D006115 ORTHO05D007528 6.6e-43 177.9 111 80.2
Phvul.005G105900 Phaseolus vulgaris HOM05D006115 ORTHO05D007528 6.6e-43 177.9 176 60.2
THA.LOC104801178 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 6.6e-43 177.9 115 80.9
unitig_26.g9943 Utricularia gibba HOM05D006115 ORTHO05D007528 6.6e-43 177.9 175 58.9
Cc05_g06750 Coffea canephora HOM05D006115 ORTHO05D007528 8.6e-43 177.6 177 59.9
GSVIVG01030552001 Vitis vinifera HOM05D006115 ORTHO05D007528 8.6e-43 177.6 174 58.0
Haze_13113 Corylus avellana HOM05D006115 ORTHO05D007528 1.1e-42 177.2 179 59.2
Oeu040003.1 Olea europaea HOM05D006115 ORTHO05D007528 1.1e-42 177.2 173 59.5
SGA_v2.0_scaffold356G49787 Striga asiatica HOM05D006115 ORTHO05D007528 1.1e-42 177.2 160 61.9
VMungo1080G1219 Vigna mungo HOM05D006115 ORTHO05D007528 1.1e-42 177.2 135 69.6
HanXRQChr17g0542591 Helianthus annuus HOM05D006115 ORTHO05D007528 1.5e-42 176.8 174 61.5
PSO832G3416 Papaver somniferum HOM05D006115 ORTHO05D007528 1.5e-42 176.8 180 57.8
PSO210G0967 Papaver somniferum HOM05D006115 ORTHO05D007528 1.9e-42 176.4 180 57.8
TWI18G1016 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 1.9e-42 176.4 137 69.3
Ah.08g220260 Amaranthus hybridus HOM05D006115 ORTHO05D007528 2.5e-42 176.0 166 59.0
QL08p037826 Quercus lobata HOM05D006115 ORTHO05D007528 3.3e-42 175.6 182 57.1
Nn1g03988 Nelumbo nucifera HOM05D006115 ORTHO05D007528 4.3e-42 175.3 181 57.5
Thecc.02G175700 Theobroma cacao HOM05D006115 ORTHO05D007528 4.3e-42 175.3 172 60.5
TPR.G35547 Trifolium pratense HOM05D006115 ORTHO05D007528 9.5e-42 174.1 189 55.6
unitig_749.g13954 Utricularia gibba HOM05D006115 ORTHO05D007528 9.5e-42 174.1 174 58.6
RcHm_v2.0_Chr2g0162381 Rosa chinensis HOM05D006115 ORTHO05D007528 1.2e-41 173.7 181 59.7
AUR62028441 Chenopodium quinoa HOM05D006115 ORTHO05D007528 1.6e-41 173.3 169 59.2
Aqoxy4G01223 Aquilegia oxysepala HOM05D006115 ORTHO05D007528 2.8e-41 172.6 178 57.9
FvH4_6g45050 Fragaria vesca HOM05D006115 ORTHO05D007528 8.1e-41 171.0 174 58.0
FAN14G2522 Fragaria x ananassa HOM05D006115 ORTHO05D007528 8.1e-41 171.0 174 58.0
Lsat_1_v5_gn_3_39480 Lactuca sativa HOM05D006115 ORTHO05D007528 1.1e-40 170.6 167 57.5
FAN02G4183 Fragaria x ananassa HOM05D006115 ORTHO05D007528 1.8e-40 169.9 178 57.9
FAN09G2594 Fragaria x ananassa HOM05D006115 ORTHO05D007528 1.8e-40 169.9 178 57.9
Zm00001eb395230 Zea mays HOM05D006115 ORTHO05D007528 1.8e-40 169.9 136 69.9
MSTRG.14200 Avicennia marina HOM05D006115 ORTHO05D007528 2.3e-40 169.5 172 59.3
CDE05G3372 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 2.3e-40 169.5 174 58.6
Os03g0333400 Oryza sativa ssp. japonica HOM05D006115 ORTHO05D007528 2.3e-40 169.5 175 56.6
FAN05G1351 Fragaria x ananassa HOM05D006115 ORTHO05D007528 3.1e-40 169.1 133 68.4
Zm00001eb015950 Zea mays HOM05D006115 ORTHO05D007528 3.1e-40 169.1 136 65.4
Sc12g0002830 Simmondsia chinensis HOM05D006115 ORTHO05D007528 1.2e-39 167.2 103 80.6
Oeu029929.1 Olea europaea HOM05D006115 ORTHO05D007528 2.0e-39 166.4 136 66.2
Dinv03833 Davidia involucrata HOM05D006115 ORTHO05D007528 4.4e-39 165.2 159 61.6
ECA246G1074 Erigeron canadensis HOM05D006115 ORTHO05D007528 4.4e-39 165.2 107 75.7
Duzib052G1052 Durio zibethinus HOM05D006115 ORTHO05D007528 6.0e-36 154.8 171 56.7
SEGI_04908 Sequoiadendron giganteum HOM05D006115 ORTHO05D007528 4.3e-34 148.7 136 58.8
Ca_01513_v3 Cicer arietinum L. HOM05D006115 ORTHO05D007528 3.1e-32 142.5 85 81.2
SMO364G0930 Selaginella moellendorffii HOM05D006115 ORTHO05D007528 1.2e-31 140.6 128 57.8
Pp3c9_26020 Physcomitrium patens HOM05D006115 ORTHO05D007528 4.9e-30 135.2 110 62.7
AagrBONN_evm.TU.Sc2ySwM_228.954 Anthoceros agrestis HOM05D006115 ORTHO05D007528 3.2e-29 132.5 170 47.1
Mapoly0049s0056 Marchantia polymorpha HOM05D006115 ORTHO05D007528 1.2e-28 130.6 156 47.4
CBR_g50764 Chara braunii HOM05D006115 ORTHO05D007528 3.0e-27 125.9 119 56.3
Actinidia11067 Actinidia chinensis HOM05D006115 ORTHO05D007528 3.9e-27 125.6 140 55.0
CDE05G0569 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 1.2e-23 114.0 78 69.2
Cre05.g243800 Chlamydomonas reinhardtii HOM05D006115 ORTHO05D007528 4.4e-23 112.1 160 41.9
MCO14G469 Micromonas commoda HOM05D006115 ORTHO05D007528 4.9e-22 108.6 119 47.1
ATR0693G305 Amborella trichopoda HOM05D006115 ORTHO05D007528 2.1e-17 93.2 125 50.4
TAR627G0228 Trochodendron aralioides HOM05D006115 ORTHO05D007528 8.1e-17 91.3 132 47.7
Dinv23684 Davidia involucrata HOM05D006115 ORTHO05D007528 1.2e-15 87.4 97 54.6


User provided reference genes

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