Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p00830 Brassica napus HOM05D000171 ORTHO05D000101 9.1e-95 350.1 166 100.0
BcaB02g09678 Brassica carinata HOM05D000171 ORTHO05D000101 8.4e-48 194.1 93 91.4
BraA10t42360Z Brassica rapa HOM05D000171 ORTHO05D000101 2.7e-46 189.1 89 94.4
AT4G21240 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.3e-24 117.1 86 64.0
AL2G16580 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.1e-18 95.5 90 53.3
Carub.0002s0517 Capsella rubella HOM05D000171 ORTHO05D000101 1.9e-15 86.7 89 44.9
Carub.0002s0516 Capsella rubella HOM05D000171 ORTHO05D000101 4.2e-15 85.5 90 45.6
C05p01150 Brassica napus HOM05D000171 ORTHO05D000101 4.6e-14 82.0 88 45.5
BolC5t28897H Brassica oleracea HOM05D000171 ORTHO05D000101 4.6e-14 82.0 88 45.5
A10p01120 Brassica napus HOM05D000171 ORTHO05D000101 3.9e-13 79.0 88 44.3
Carub.0002s0083 Capsella rubella HOM05D000171 ORTHO05D000101 2.5e-12 76.3 96 40.6
BcaB03g15795 Brassica carinata HOM05D000171 ORTHO05D000101 7.4e-12 74.7 88 43.2
Carub.0002s0515 Capsella rubella HOM05D000171 ORTHO05D000101 4.1e-10 68.9 77 45.5
AT1G47790 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 9.1e-10 67.8 74 47.3
AL4G33150 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.5e-09 67.0 94 39.4
AL3G17170 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.4e-09 65.9 82 43.9
CARHR040900 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.4e-09 65.9 96 36.5
AT1G47730 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 4.5e-09 65.5 97 37.1
BcaB07g33527 Brassica carinata HOM05D000171 ORTHO05D000101 5.9e-09 65.1 124 30.6
BcaB07g33525 Brassica carinata HOM05D000171 ORTHO05D000101 1.0e-08 64.3 124 29.8
BcaNung05623 Brassica carinata HOM05D000171 ORTHO05D000101 1.3e-08 63.9 91 34.1
Carub.0002s1701 Capsella rubella HOM05D000171 ORTHO05D000101 2.9e-08 62.8 69 43.5
Carub.0004s1097 Capsella rubella HOM05D000171 ORTHO05D000101 6.5e-08 61.6 90 38.9
AL1G54620 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.1e-07 60.8 83 39.8
AL6G29130 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.1e-07 60.8 81 43.2
AL1G58610 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.5e-07 59.7 86 34.9
CARHR121110 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.2e-07 59.3 86 37.2
AL2G11100 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.2e-07 58.9 56 42.9
AL7G32860 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.2e-07 58.9 38 73.7
AT1G50880 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 4.2e-07 58.9 61 42.6
BcaC08g43262 Brassica carinata HOM05D000171 ORTHO05D000101 5.5e-07 58.5 107 32.7
AT1G59690 Arabidopsis thaliana HOM05D000171 ORTHO05D023693 1.2e-06 57.4 68 38.2
A06p02840 Brassica napus HOM05D000171 ORTHO05D000101 1.6e-06 57.0 85 32.9
BraA06t23491Z Brassica rapa HOM05D000171 ORTHO05D000101 1.6e-06 57.0 85 32.9
Thhalv10003347m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.6e-06 57.0 90 38.9
Thhalv10027600m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.1e-06 56.6 87 35.6
Thhalv10029264m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.7e-06 56.2 83 42.2
Thhalv10015870m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 3.6e-06 55.8 95 34.7
Thhalv10009752m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 4.7e-06 55.5 76 40.8
C06p06060 Brassica napus HOM05D000171 ORTHO05D000101 7.9e-06 54.7 87 29.9


User provided reference genes

Program Settings