Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p69280 Brassica napus HOM05D008883 ORTHO05D011075 2.4e-72 275.4 141 100.0
C08p54100 Brassica napus HOM05D008883 ORTHO05D011075 2.8e-68 261.9 132 100.0
BolC8t52918H Brassica oleracea HOM05D008883 ORTHO05D011075 2.8e-68 261.9 132 100.0
BcaC05g29665 Brassica carinata HOM05D008883 ORTHO05D011075 1.1e-67 260.0 132 99.2
BcaC04g20437 Brassica carinata HOM05D008883 ORTHO05D011075 7.1e-56 220.7 111 99.1
BcaB08g35019 Brassica carinata HOM05D008883 ORTHO05D011075 6.2e-52 207.6 132 77.3
BcaB06g27532 Brassica carinata HOM05D008883 ORTHO05D011075 1.4e-51 206.5 140 75.0
SpUn0486_0010 Schrenkiella parvula HOM05D008883 ORTHO05D011075 2.2e-33 146.0 127 58.3
SpUn0003_0120 Schrenkiella parvula HOM05D008883 ORTHO05D011075 4.2e-32 141.7 129 57.4
SpUn1299_0010 Schrenkiella parvula HOM05D008883 ORTHO05D011075 2.7e-23 112.5 91 59.3
CARHR108020 Cardamine hirsuta HOM05D008883 ORTHO05D011075 7.9e-23 110.9 113 49.6
SpUn1191_0010 Schrenkiella parvula HOM05D008883 ORTHO05D011075 8.8e-22 107.5 93 54.8
BcaC04g20434 Brassica carinata HOM05D008883 ORTHO05D011075 2.0e-21 106.3 121 47.1
Sp5g18780 Schrenkiella parvula HOM05D008883 ORTHO05D011075 1.3e-20 103.6 93 55.9
BcaC04g20436 Brassica carinata HOM05D008883 ORTHO05D011075 2.8e-20 102.4 132 42.4
A09p69320 Brassica napus HOM05D008883 ORTHO05D011075 6.3e-20 101.3 121 45.5
BolC8t52922H Brassica oleracea HOM05D008883 ORTHO05D011075 6.3e-20 101.3 121 45.5
CARHR158160 Cardamine hirsuta HOM05D008883 ORTHO05D011075 1.1e-19 100.5 113 46.0
Sp7g05080 Schrenkiella parvula HOM05D008883 ORTHO05D011075 1.5e-18 96.7 66 63.6
Sp3g24800 Schrenkiella parvula HOM05D008883 ORTHO05D011075 3.8e-17 92.0 121 45.5
Sp5g18640 Schrenkiella parvula HOM05D008883 ORTHO05D011075 7.9e-15 84.3 129 40.3
A09p69290 Brassica napus HOM05D008883 ORTHO05D011075 7.4e-13 77.8 132 37.1
BolC8t52919H Brassica oleracea HOM05D008883 ORTHO05D011075 7.4e-13 77.8 132 37.1
CiPaw.06G099700 Carya illinoinensis HOM05D002915 ORTHO05D003004 1.4e-11 73.6 127 33.1
Sp7g07010 Schrenkiella parvula HOM05D008883 ORTHO05D011075 2.0e-10 69.7 72 48.6
BcaC05g29663 Brassica carinata HOM05D008883 ORTHO05D011075 4.5e-10 68.6 121 38.8
Thhalv10002269m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 1.5e-08 63.5 120 30.0
Atru.chr1.711 Acer truncatum HOM05D002915 ORTHO05D003004 4.2e-08 62.0 121 33.1
BraA07t28801Z Brassica rapa HOM05D003839 ORTHO05D003352 5.5e-08 61.6 124 29.8
CiPaw.05G115500 Carya illinoinensis HOM05D002915 ORTHO05D003004 5.5e-08 61.6 124 30.6
TAR629G0865 Trochodendron aralioides HOM05D002915 ORTHO05D003004 5.5e-08 61.6 133 30.1
A09p20270 Brassica napus HOM05D003839 ORTHO05D003352 7.2e-08 61.2 124 29.0
CiPaw.05G115300 Carya illinoinensis HOM05D002915 ORTHO05D003004 7.2e-08 61.2 124 30.6
CiPaw.05G115400 Carya illinoinensis HOM05D002915 ORTHO05D003004 7.2e-08 61.2 124 30.6
Dinv14798 Davidia involucrata HOM05D002915 ORTHO05D003004 9.4e-08 60.8 122 31.1
Atru.chr1.712 Acer truncatum HOM05D002915 ORTHO05D003004 1.2e-07 60.5 121 32.2
CARHR101890 Cardamine hirsuta HOM05D008292 ORTHO05D003352 1.2e-07 60.5 123 31.7
Lsat_1_v5_gn_8_150181 Lactuca sativa HOM05D000825 ORTHO05D003684 1.2e-07 60.5 134 29.1
AT2G35280 Arabidopsis thaliana HOM05D008292 ORTHO05D003352 1.6e-07 60.1 123 30.9
Haze_24934 Corylus avellana HOM05D002915 ORTHO05D003004 1.6e-07 60.1 130 30.8
C09p21410 Brassica napus HOM05D003839 ORTHO05D003352 2.1e-07 59.7 120 30.0
Manes.12G023850 Manihot esculenta HOM05D002915 ORTHO05D003004 2.1e-07 59.7 125 32.0
Hma1.2p1_0167F.1_g073810 Hydrangea macrophylla HOM05D002915 ORTHO05D003004 2.7e-07 59.3 126 30.2
Medtr4g119850 Medicago truncatula HOM05D002915 ORTHO05D003004 2.7e-07 59.3 119 33.6
Psat0s1573g0120 Pisum sativum HOM05D002915 ORTHO05D003004 2.7e-07 59.3 125 33.6
Psat4g025920 Pisum sativum HOM05D002915 ORTHO05D003004 2.7e-07 59.3 129 31.8
C08p54140 Brassica napus HOM05D008883 ORTHO05D011075 3.6e-07 58.9 63 46.0
BcaC04g22280 Brassica carinata HOM05D003839 ORTHO05D003352 4.7e-07 58.5 132 28.0
Manes.12G014800 Manihot esculenta HOM05D002915 ORTHO05D003004 4.7e-07 58.5 125 32.0
Sabra13G0007400 Salix brachista HOM05D002915 ORTHO05D003004 4.7e-07 58.5 120 29.2
Atru.chr11.2244 Acer truncatum HOM05D002915 ORTHO05D003004 6.1e-07 58.2 126 32.5
Atru.chr11.2259 Acer truncatum HOM05D002915 ORTHO05D003004 6.1e-07 58.2 126 32.5
TPR.G3196 Trifolium pratense HOM05D002915 ORTHO05D003004 6.1e-07 58.2 129 32.6
C08p54110 Brassica napus HOM05D008883 ORTHO05D011075 1.0e-06 57.4 101 35.6
BraA08t34531Z Brassica rapa HOM05D008292 ORTHO05D003352 1.0e-06 57.4 128 28.9
BolC2t12326H Brassica oleracea HOM05D008292 ORTHO05D003352 1.8e-06 56.6 128 28.9
BolC9t55033H Brassica oleracea HOM05D003839 ORTHO05D003352 1.8e-06 56.6 139 28.1
Potri.001G321400 Populus trichocarpa HOM05D002915 ORTHO05D003004 1.8e-06 56.6 130 28.5
QL03p054762 Quercus lobata HOM05D002915 ORTHO05D003004 1.8e-06 56.6 126 31.7
THA.LOC104810144 Tarenaya hassleriana HOM05D002915 ORTHO05D003004 1.8e-06 56.6 122 31.1
Thhalv10005434m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 2.3e-06 56.2 132 28.8
Lj4g0008862 Lotus japonicus HOM05D002915 ORTHO05D003004 2.3e-06 56.2 119 32.8
BcaB01g00999 Brassica carinata HOM05D008292 ORTHO05D003352 4.0e-06 55.5 124 29.8
BcaC03g15888 Brassica carinata HOM05D008292 ORTHO05D003352 4.0e-06 55.5 127 29.1
BcaC03g17703 Brassica carinata HOM05D008292 ORTHO05D003352 4.0e-06 55.5 128 28.1
C09p33270 Brassica napus HOM05D008292 ORTHO05D003352 4.0e-06 55.5 124 29.0
BolC2t11778H Brassica oleracea HOM05D008292 ORTHO05D003352 4.0e-06 55.5 128 28.1
BolC9t56163H Brassica oleracea HOM05D008292 ORTHO05D003352 4.0e-06 55.5 124 29.0
Lj4g0001673 Lotus japonicus HOM05D002915 ORTHO05D003004 4.0e-06 55.5 131 32.1
Cfa002665 Carpinus fangiana HOM05D002915 ORTHO05D003004 5.2e-06 55.1 130 30.8
Manes.11G084185 Manihot esculenta HOM05D002915 ORTHO05D003004 5.2e-06 55.1 117 29.1
TAR629G0058 Trochodendron aralioides HOM05D002915 ORTHO05D003004 5.2e-06 55.1 125 29.6
A01p17040 Brassica napus HOM05D008292 ORTHO05D003352 6.7e-06 54.7 134 30.6
BraA09t39508Z Brassica rapa HOM05D008292 ORTHO05D003352 6.7e-06 54.7 134 30.6
BcaC07g37399 Brassica carinata HOM05D008292 ORTHO05D003352 8.8e-06 54.3 124 29.0
A05p32880 Brassica napus HOM05D008292 ORTHO05D003352 8.8e-06 54.3 124 27.4
BraA05t22695Z Brassica rapa HOM05D008292 ORTHO05D003352 8.8e-06 54.3 124 27.4
Potri.013G008800 Populus trichocarpa HOM05D002915 ORTHO05D003004 8.8e-06 54.3 119 27.7
TAR629G2135 Trochodendron aralioides HOM05D002915 ORTHO05D003004 8.8e-06 54.3 114 31.6


User provided reference genes

Program Settings