Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p68480 Brassica napus HOM05D002098 ORTHO05D021779 1.3e-78 296.2 143 100.0
BraA09t42191Z Brassica rapa HOM05D002523 ORTHO05D021779 1.7e-25 119.8 58 96.6
BcaC07g42299 Brassica carinata HOM05D002098 ORTHO05D001998 5.2e-22 108.2 57 84.2
BcaC07g42298 Brassica carinata HOM05D002098 ORTHO05D021779 1.4e-19 100.1 54 85.2
A09p68490 Brassica napus HOM05D002098 ORTHO05D001998 7.0e-19 97.8 57 80.7
BraA09t42192Z Brassica rapa HOM05D002098 ORTHO05D001998 7.0e-19 97.8 57 80.7
Thhalv10008149m.g Eutrema salsugineum HOM05D002098 ORTHO05D001998 7.0e-19 97.8 57 80.7
C08p53100 Brassica napus HOM05D002098 ORTHO05D001998 3.0e-17 92.4 57 75.4
BcaC07g42411 Brassica carinata HOM05D002098 ORTHO05D001998 5.0e-17 91.7 57 73.7
BolC8t52825H Brassica oleracea HOM05D002098 ORTHO05D001998 5.0e-17 91.7 57 73.7
Sp1g01840 Schrenkiella parvula HOM05D002098 ORTHO05D001998 1.1e-16 90.5 57 77.2
A10p01510 Brassica napus HOM05D002098 ORTHO05D001998 5.6e-16 88.2 57 77.2
BraA10t42427Z Brassica rapa HOM05D002098 ORTHO05D001998 5.6e-16 88.2 57 77.2
BcaB03g15759 Brassica carinata HOM05D002098 ORTHO05D001998 1.6e-15 86.7 57 75.4
BcaC05g24588 Brassica carinata HOM05D002098 ORTHO05D001998 1.6e-15 86.7 57 75.4
C05p01480 Brassica napus HOM05D002098 ORTHO05D001998 1.6e-15 86.7 57 75.4
BolC5t28930H Brassica oleracea HOM05D002098 ORTHO05D001998 3.6e-15 85.5 57 75.4
CARHR002200 Cardamine hirsuta HOM05D002098 ORTHO05D001998 4.7e-15 85.1 57 71.9
Sp1g01850 Schrenkiella parvula HOM05D002098 ORTHO05D001998 2.3e-14 82.8 57 73.7
AT1G02860 Arabidopsis thaliana HOM05D002098 ORTHO05D001998 8.9e-14 80.9 57 70.2
AL1G12270 Arabidopsis lyrata HOM05D002098 ORTHO05D001998 5.8e-13 78.2 57 66.7
BcaC07g42412 Brassica carinata HOM05D002523 ORTHO05D021779 3.2e-11 72.4 46 82.6
BolC8t52824H Brassica oleracea HOM05D002098 ORTHO05D021779 3.2e-11 72.4 46 82.6
Carub.0001s0198 Capsella rubella HOM05D002098 ORTHO05D001998 4.1e-11 72.0 58 63.8
Aa31LG1G9730 Aethionema arabicum HOM05D002098 ORTHO05D001998 6.6e-09 64.7 57 61.4
THA.LOC104825972 Tarenaya hassleriana HOM05D002098 ORTHO05D001998 1.9e-08 63.2 57 61.4
Eucgr.H01152 Eucalyptus grandis HOM05D002098 ORTHO05D001998 1.6e-07 60.1 57 57.9
Lj2C1192G10 Lonicera japonica HOM05D002098 ORTHO05D001998 2.1e-07 59.7 63 54.0
vmacro02458 Vaccinium macrocarpon HOM05D002098 ORTHO05D001998 2.1e-07 59.7 57 54.4
Rhsim13G0011200 Rhododendron simsii HOM05D002098 ORTHO05D001998 3.6e-07 58.9 59 57.6
PGR119G0803 Punica granatum HOM05D002098 ORTHO05D001998 6.2e-07 58.2 61 50.8
PGR119G1987 Punica granatum HOM05D002098 ORTHO05D001998 6.2e-07 58.2 61 50.8
Migut.D00208 Erythranthe guttata HOM05D002098 ORTHO05D001998 1.1e-06 57.4 59 49.2
Lj1A26T27 Lonicera japonica HOM05D002098 ORTHO05D001998 1.1e-06 57.4 58 53.4
Actinidia32223 Actinidia chinensis HOM05D002098 ORTHO05D001998 6.8e-06 54.7 57 54.4


User provided reference genes

Program Settings