Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p68250 Brassica napus HOM05D006713 ORTHO05D008601 5.6e-228 793.9 388 100.0
BraA09t42160Z Brassica rapa HOM05D006713 ORTHO05D008601 8.1e-227 790.0 388 99.5
BcaC07g42238 Brassica carinata HOM05D006713 ORTHO05D008601 2.9e-216 755.0 389 95.6
C08p52690 Brassica napus HOM05D006713 ORTHO05D008601 2.9e-216 755.0 389 95.6
BolC8t52795H Brassica oleracea HOM05D006713 ORTHO05D008601 2.9e-216 755.0 389 95.6
BcaC07g42233 Brassica carinata HOM05D006713 ORTHO05D008601 4.3e-204 714.5 388 92.5
Thhalv10007899m.g Eutrema salsugineum HOM05D006713 ORTHO05D008601 2.4e-194 682.2 386 86.0
Sp1g02570 Schrenkiella parvula HOM05D006713 ORTHO05D008601 1.1e-191 673.3 388 85.8
AL1G13180 Arabidopsis lyrata HOM05D006713 ORTHO05D008601 7.7e-185 650.6 388 82.0
CARHR003020 Cardamine hirsuta HOM05D006713 ORTHO05D008601 2.1e-182 642.5 388 82.5
AT1G03687 Arabidopsis thaliana HOM05D006713 ORTHO05D008601 3.3e-180 635.2 388 80.4
Aa31LG1G20990 Aethionema arabicum HOM05D006713 ORTHO05D008601 5.7e-180 634.4 389 80.5
Carub.0001s0279 Capsella rubella HOM05D006713 ORTHO05D008601 2.5e-175 619.0 351 83.5
THA.LOC104815960 Tarenaya hassleriana HOM05D006713 ORTHO05D008601 1.1e-164 583.6 386 73.6
Atru.chr6.3001 Acer truncatum HOM05D006713 ORTHO05D008601 1.3e-144 516.9 385 67.0
Ciclev10015547m.g Citrus clementina HOM05D006713 ORTHO05D008601 1.6e-137 493.4 352 66.2
QL02p049491 Quercus lobata HOM05D006713 ORTHO05D008601 3.8e-136 488.8 335 68.7
QL08p038662 Quercus lobata HOM05D006713 ORTHO05D008601 3.8e-136 488.8 335 68.7
CSS0037354 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 4.7e-134 481.9 355 67.0
Eucgr.A01814 Eucalyptus grandis HOM05D006713 ORTHO05D008601 4.7e-134 481.9 397 60.2
Gohir.A03G157000 Gossypium hirsutum HOM05D006713 ORTHO05D008601 6.1e-134 481.5 383 61.9
RcHm_v2.0_Chr2g0126401 Rosa chinensis HOM05D006713 ORTHO05D008601 1.4e-133 480.3 384 63.0
Gohir.D02G180200 Gossypium hirsutum HOM05D006713 ORTHO05D008601 5.2e-133 478.4 387 62.0
TAR235G0002 Trochodendron aralioides HOM05D006713 ORTHO05D008601 1.2e-132 477.2 378 62.7
Gorai.005G201900 Gossypium raimondii HOM05D006713 ORTHO05D008601 1.5e-132 476.9 387 61.8
Nn1g06572 Nelumbo nucifera HOM05D006713 ORTHO05D008601 1.5e-132 476.9 350 66.3
Duzib052G0863 Durio zibethinus HOM05D006713 ORTHO05D008601 2.0e-132 476.5 340 66.8
GSVIVG01020539001 Vitis vinifera HOM05D006713 ORTHO05D008601 9.8e-132 474.2 342 67.5
Glyma.13G297500 Glycine max HOM05D006713 ORTHO05D008601 2.2e-131 473.0 338 68.3
arahy.Tifrunner.gnm1.ann1.FW5TAU Arachis hypogaea HOM05D006713 ORTHO05D008601 2.9e-131 472.6 330 68.8
FAN05G2673 Fragaria x ananassa HOM05D006713 ORTHO05D008601 3.7e-131 472.2 390 62.1
arahy.Tifrunner.gnm1.ann1.Q4ZJSX Arachis hypogaea HOM05D006713 ORTHO05D008601 1.1e-130 470.7 330 68.8
FvH4_6g26190 Fragaria vesca HOM05D006713 ORTHO05D008601 1.1e-130 470.7 384 62.0
Cpa.g.sc34.156 Carica papaya HOM05D006713 ORTHO05D008601 1.6e-129 466.8 327 67.6
MD17G1241000 Malus domestica HOM05D006713 ORTHO05D008601 1.6e-129 466.8 343 65.9
Potri.013G132100 Populus trichocarpa HOM05D006713 ORTHO05D008601 1.0e-128 464.2 338 66.9
TWI18G1058 Tripterygium wilfordii HOM05D006713 ORTHO05D008601 1.0e-128 464.2 349 62.8
FAN09G0901 Fragaria x ananassa HOM05D006713 ORTHO05D008601 2.3e-128 463.0 384 62.0
VMungo1080G0618 Vigna mungo HOM05D006713 ORTHO05D008601 2.3e-128 463.0 357 65.3
Lalb_Chr14g0366891 Lupinus albus HOM05D006713 ORTHO05D008601 8.6e-128 461.1 331 67.1
Sabra13G0111600 Salix brachista HOM05D006713 ORTHO05D008601 1.1e-127 460.7 360 63.6
Dinv26425 Davidia involucrata HOM05D006713 ORTHO05D008601 1.9e-127 459.9 337 66.5
FAN02G3934 Fragaria x ananassa HOM05D006713 ORTHO05D008601 2.5e-127 459.5 365 62.7
Rhsim06G0143600 Rhododendron simsii HOM05D006713 ORTHO05D008601 3.3e-127 459.1 354 64.4
Lj3g0026133 Lotus japonicus HOM05D006713 ORTHO05D008601 7.3e-127 458.0 348 65.5
Psat5g271440 Pisum sativum HOM05D006713 ORTHO05D008601 1.6e-126 456.8 338 66.9
Sc21g0002760 Simmondsia chinensis HOM05D006713 ORTHO05D008601 1.4e-125 453.8 332 63.0
Medtr2g090335 Medicago truncatula HOM05D006713 ORTHO05D008601 5.2e-125 451.8 327 66.7
MBI06_g06484_MAGBIO Magnolia biondii HOM05D006713 ORTHO05D008601 1.5e-124 450.3 341 64.5
Actinidia09856 Actinidia chinensis HOM05D006713 ORTHO05D008601 2.0e-124 449.9 334 65.9
Ah.01g015180 Amaranthus hybridus HOM05D006713 ORTHO05D008601 2.0e-124 449.9 329 65.3
Hma1.2p1_1201F.1_g266570 Hydrangea macrophylla HOM05D006713 ORTHO05D008601 5.8e-124 448.4 382 59.4
vmacro12297 Vaccinium macrocarpon HOM05D006713 ORTHO05D008601 2.9e-123 446.0 359 62.7
DCAR_021241 Daucus carota HOM05D006713 ORTHO05D008601 8.3e-123 444.5 352 61.9
HanXRQChr17g0556501 Helianthus annuus HOM05D006713 ORTHO05D008601 8.3e-123 444.5 333 64.3
CANSAT78G0617 Cannabis sativa HOM05D006713 ORTHO05D008601 1.4e-122 443.7 337 63.2
Migut.H01188 Erythranthe guttata HOM05D006713 ORTHO05D008601 2.4e-122 443.0 331 62.5
Aqoxy1G02470 Aquilegia oxysepala HOM05D006713 ORTHO05D008601 3.2e-122 442.6 332 63.3
CsaV3_6G012990 Cucumis sativus L. HOM05D006713 ORTHO05D008601 3.2e-122 442.6 333 64.0
Lsat_1_v5_gn_8_133201 Lactuca sativa HOM05D006713 ORTHO05D008601 5.4e-122 441.8 362 60.8
EL10Ac9g20760 Beta vulgaris HOM05D006713 ORTHO05D008601 4.6e-121 438.7 394 54.3
ECA234G3347 Erigeron canadensis HOM05D006713 ORTHO05D008601 2.3e-120 436.4 333 63.1
Peaxi162Scf00132g00240 Petunia axillaris HOM05D006713 ORTHO05D008601 5.1e-120 435.3 333 62.2
MSTRG.12823 Avicennia marina HOM05D006713 ORTHO05D008601 1.1e-119 434.1 331 62.2
Solyc07g054070.4 Solanum lycopersicum HOM05D006713 ORTHO05D008601 4.3e-119 432.2 334 61.4
CDE10G0241 Ceratophyllum demersum HOM05D006713 ORTHO05D008601 2.8e-118 429.5 344 60.5
CAN.G248.32 Capsicum annuum HOM05D006713 ORTHO05D008601 3.6e-118 429.1 329 60.8
Cc05_g07100 Coffea canephora HOM05D006713 ORTHO05D008601 4.7e-118 428.7 337 60.8
Hund01101 Selenicereus undatus HOM05D006713 ORTHO05D008601 1.8e-117 426.8 400 53.8
PGSC0003DMG400018345 Solanum tuberosum HOM05D006713 ORTHO05D008601 5.2e-117 425.2 350 58.9
AUR62038189 Chenopodium quinoa HOM05D006713 ORTHO05D008601 1.7e-115 420.2 373 57.4
Zm00001eb273220 Zea mays HOM05D006713 ORTHO05D008601 1.4e-114 417.2 337 59.1
ATR0665G517 Amborella trichopoda HOM05D006713 ORTHO05D008601 2.5e-111 406.4 329 59.9
HPP92_023829 Vanilla planifolia HOM05D006713 ORTHO05D008601 8.1e-110 401.4 342 58.2
HPP92_023892 Vanilla planifolia HOM05D006713 ORTHO05D008601 1.2e-108 397.5 364 56.0
Lj8A113G48 Lonicera japonica HOM05D006713 ORTHO05D008601 4.9e-107 392.1 352 54.5
Haze_13156 Corylus avellana HOM05D006713 ORTHO05D008601 1.5e-103 380.6 331 56.5
Prupe.3G137200 Prunus persica HOM05D006713 ORTHO05D008601 4.3e-103 379.0 383 52.2
PSO541G1719 Papaver somniferum HOM05D006713 ORTHO05D008601 7.3e-103 378.3 349 55.9
Ca_01502_v3 Cicer arietinum L. HOM05D006713 ORTHO05D008601 1.6e-102 377.1 337 58.2
PSO675G6747 Papaver somniferum HOM05D006713 ORTHO05D008601 2.1e-102 376.7 371 54.4
Phvul.005G104000 Phaseolus vulgaris HOM05D006713 ORTHO05D008601 1.5e-100 370.5 264 66.3
CSS0039998 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 9.9e-100 367.9 285 63.2
Manes.12G089598 Manihot esculenta HOM05D006713 ORTHO05D008601 2.9e-99 366.3 310 59.0
ClCG02G017610 Citrullus lanatus HOM05D006713 ORTHO05D008601 2.4e-98 363.2 492 42.7
Nitab4.5_0002169g0110 Nicotiana tabacum HOM05D006713 ORTHO05D008601 1.0e-96 357.8 351 54.7
Nitab4.5_0000512g0100 Nicotiana tabacum HOM05D006713 ORTHO05D008601 2.3e-96 356.7 343 54.8
unitig_62.g23167 Utricularia gibba HOM05D006713 ORTHO05D008601 4.8e-94 349.0 276 60.9
Thecc.02G179100 Theobroma cacao HOM05D006713 ORTHO05D008601 5.3e-93 345.5 242 65.7
Sopen07g028010 Solanum pennellii HOM05D006713 ORTHO05D008601 1.7e-91 340.5 263 59.3
AUR62038063 Chenopodium quinoa HOM05D006713 ORTHO05D008601 2.4e-90 336.7 320 54.4
AagrBONN_evm.TU.Sc2ySwM_117.1346 Anthoceros agrestis HOM05D006713 ORTHO05D008601 6.0e-89 332.0 321 52.3
CiPaw.03G176500 Carya illinoinensis HOM05D006713 ORTHO05D008601 1.5e-84 317.4 235 62.1
Sed0026559 Sechium edule HOM05D006713 ORTHO05D008601 2.5e-82 310.1 264 58.0
Mapoly0088s0019 Marchantia polymorpha HOM05D006713 ORTHO05D008601 5.1e-80 302.4 337 45.1
Os06g0342750 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 8.2e-78 295.0 235 58.7
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 6.9e-77 292.0 379 44.3
MELO3C013617.2 Cucumis melo HOM05D006713 ORTHO05D008601 4.9e-75 285.8 333 47.7
Glyma.12G203966 Glycine max HOM05D006713 ORTHO05D008601 5.9e-68 262.3 166 70.5
SalBow1G6029 Salvia bowleyana HOM05D006713 ORTHO05D008601 2.2e-67 260.4 172 65.1
SMO117G0197 Selaginella moellendorffii HOM05D006713 ORTHO05D008601 1.4e-66 257.7 273 46.9
CBR_g35040 Chara braunii HOM05D006713 ORTHO05D008601 5.3e-61 239.2 341 40.2
Glyma.12G204032 Glycine max HOM05D006713 ORTHO05D008601 8.3e-38 162.2 102 77.5
SalBow1G1793 Salvia bowleyana HOM05D006713 ORTHO05D008601 2.9e-35 153.7 144 51.4
Os06g0343000 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 3.8e-27 126.7 101 62.4
MELO3C001128.2 Cucumis melo HOM05D006713 ORTHO05D008601 4.2e-26 123.2 78 69.2
MELO3C013610.2 Cucumis melo HOM05D006713 ORTHO05D008601 3.3e-18 97.1 75 65.3
SEGI_39135 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 8.9e-16 89.0 97 46.4
Oeu023431.1 Olea europaea HOM05D006713 ORTHO05D008601 1.9e-10 71.2 59 61.0
MELO3C013612.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.8e-08 64.7 47 57.4
MELO3C035062.2 Cucumis melo HOM05D006713 ORTHO05D008601 6.8e-08 62.8 39 69.2


User provided reference genes

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