Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p67110 Brassica napus HOM05D008524 ORTHO05D010700 2.1e-32 141.7 71 100.0
C08p51390 Brassica napus HOM05D008524 ORTHO05D010700 4.0e-31 137.5 71 97.2
BolC8t52665H Brassica oleracea HOM05D008524 ORTHO05D010700 4.0e-31 137.5 71 97.2
BcaC07g42082 Brassica carinata HOM05D008524 ORTHO05D010700 1.5e-30 135.6 71 95.8
BraA09t42044Z Brassica rapa HOM05D008524 ORTHO05D010700 1.5e-30 135.6 71 95.8
BcaC07g42083 Brassica carinata HOM05D008524 ORTHO05D010700 2.2e-29 131.7 71 93.0
BcaC07g42144 Brassica carinata HOM05D008524 ORTHO05D010700 8.3e-29 129.8 71 91.5
Thhalv10009900m.g Eutrema salsugineum HOM05D008524 ORTHO05D010700 1.1e-23 112.8 70 80.0
BraA10t42738Z Brassica rapa HOM05D008524 ORTHO05D010700 7.0e-20 100.1 71 71.8
C05p04400 Brassica napus HOM05D008524 ORTHO05D010700 1.6e-19 99.0 71 70.4
BolC5t29213H Brassica oleracea HOM05D008524 ORTHO05D010700 1.6e-19 99.0 71 70.4
BcaB02g06823 Brassica carinata HOM05D008524 ORTHO05D010700 3.5e-19 97.8 69 68.1
BcaC05g24308 Brassica carinata HOM05D008524 ORTHO05D010700 3.5e-19 97.8 70 70.0
AT1G06137 Arabidopsis thaliana HOM05D008524 ORTHO05D010700 6.0e-19 97.1 66 75.8
Carub.0001s0547 Capsella rubella HOM05D008524 ORTHO05D010700 1.3e-18 95.9 68 73.5
AL4G26560 Arabidopsis lyrata HOM05D008524 ORTHO05D010700 6.2e-16 87.0 70 62.9
CARHR005650 Cardamine hirsuta HOM05D008524 ORTHO05D010700 6.2e-16 87.0 67 67.2
BcaB06g28556 Brassica carinata HOM05D008524 ORTHO05D010700 1.5e-14 82.4 71 63.4
THA.LOC104826208 Tarenaya hassleriana HOM05D008524 ORTHO05D010700 7.5e-14 80.1 71 59.2
CARHR124950 Cardamine hirsuta HOM05D008524 ORTHO05D010700 4.9e-13 77.4 72 58.3
CARHR214280 Cardamine hirsuta HOM05D008524 ORTHO05D010700 4.9e-13 77.4 72 58.3
Carub.0004s1264 Capsella rubella HOM05D008524 ORTHO05D010700 3.2e-12 74.7 70 62.9
BcaC02g11228 Brassica carinata HOM05D008524 ORTHO05D010700 1.2e-11 72.8 73 56.2
Aa31LG5G5630 Aethionema arabicum HOM05D008524 ORTHO05D010700 1.6e-11 72.4 70 54.3
AT1G06135 Arabidopsis thaliana HOM05D008524 ORTHO05D010700 6.0e-11 70.5 70 54.3
AT2G31335 Arabidopsis thaliana HOM05D008524 ORTHO05D010700 1.3e-10 69.3 61 57.4
AL4G26580 Arabidopsis lyrata HOM05D008524 ORTHO05D010700 1.7e-10 68.9 71 53.5
Carub.0001s0546 Capsella rubella HOM05D008524 ORTHO05D010700 2.3e-10 68.6 70 54.3
Carub.0004s1266 Capsella rubella HOM05D008524 ORTHO05D010700 6.6e-10 67.0 71 50.7
CARHR005640 Cardamine hirsuta HOM05D008524 ORTHO05D010700 6.6e-10 67.0 70 54.3
AT2G31345 Arabidopsis thaliana HOM05D008524 ORTHO05D010700 8.6e-10 66.6 71 52.1
BcaC01g05973 Brassica carinata HOM05D008524 ORTHO05D010700 1.1e-09 66.2 68 51.5
CARHR124970 Cardamine hirsuta HOM05D008524 ORTHO05D010700 1.5e-09 65.9 70 50.0
Aa31LG1G7140 Aethionema arabicum HOM05D008524 ORTHO05D010700 1.9e-09 65.5 69 55.1
BcaC01g05959 Brassica carinata HOM05D008524 ORTHO05D010700 1.9e-09 65.5 71 52.1
C04p61200 Brassica napus HOM05D000060 ORTHO05D000428 5.6e-09 63.9 74 52.7
THA.LOC104800884 Tarenaya hassleriana HOM05D008524 ORTHO05D010700 7.3e-09 63.5 71 52.1
Aa31LG5G5610 Aethionema arabicum HOM05D008524 ORTHO05D010700 1.6e-08 62.4 71 50.7
BcaB01g04049 Brassica carinata HOM05D008524 ORTHO05D010700 4.7e-08 60.8 67 49.3
BcaC01g05960 Brassica carinata HOM05D008524 ORTHO05D010700 4.7e-08 60.8 67 49.3
A03p17480 Brassica napus HOM05D008524 ORTHO05D010700 8.1e-08 60.1 70 50.0
Thhalv10017816m.g Eutrema salsugineum HOM05D008524 ORTHO05D010700 1.4e-07 59.3 72 52.8
Sp4g13820 Schrenkiella parvula HOM05D008524 ORTHO05D010700 1.8e-07 58.9 72 50.0
BcaC02g11232 Brassica carinata HOM05D008524 ORTHO05D010700 2.4e-07 58.5 73 50.7
BcaB06g28555 Brassica carinata HOM05D008524 ORTHO05D010700 4.0e-07 57.8 74 51.4
BcaC02g07976 Brassica carinata HOM05D008524 ORTHO05D010700 4.0e-07 57.8 73 50.7
BolC4t27606H Brassica oleracea HOM05D008524 ORTHO05D010700 4.0e-07 57.8 73 50.7
BcaC02g11230 Brassica carinata HOM05D008524 ORTHO05D010700 5.2e-07 57.4 73 49.3


User provided reference genes

Program Settings