Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p65110 Brassica napus HOM05D009074 ORTHO05D011606 2.3e-173 612.1 301 100.0
BraA09t41854Z Brassica rapa HOM05D009074 ORTHO05D011606 2.3e-173 612.1 301 100.0
BcaC07g41834 Brassica carinata HOM05D009074 ORTHO05D011606 6.0e-137 491.1 292 85.6
C08p48960 Brassica napus HOM05D009074 ORTHO05D011606 1.9e-82 310.1 305 57.4
C08p49050 Brassica napus HOM05D009074 ORTHO05D011606 2.3e-75 286.6 201 76.6
BcaB08g37341 Brassica carinata HOM05D009074 ORTHO05D011606 4.7e-65 252.3 201 66.7
BolC8t52437H Brassica oleracea HOM05D009074 ORTHO05D011606 2.9e-62 243.0 138 89.9
BcaC07g41830 Brassica carinata HOM05D009074 ORTHO05D011606 1.1e-42 177.9 87 98.9
C06p10420 Brassica napus HOM05D009074 ORTHO05D011606 5.3e-32 142.5 234 39.3
BolC6t36119H Brassica oleracea HOM05D009074 ORTHO05D011606 9.0e-32 141.7 235 39.1
BcaB08g37346 Brassica carinata HOM05D009074 ORTHO05D011606 2.4e-29 133.7 87 79.3
AL1G22560 Arabidopsis lyrata HOM05D009074 ORTHO05D011606 4.2e-29 132.9 168 47.6
BcaC08g43626 Brassica carinata HOM05D009074 ORTHO05D011606 2.3e-27 127.1 223 39.0
AL1G21130 Arabidopsis lyrata HOM05D009074 ORTHO05D011606 3.1e-24 116.7 154 43.5
BcaC07g41831 Brassica carinata HOM05D009074 ORTHO05D011606 4.9e-22 109.4 90 68.9
Aa31LG9G11450 Aethionema arabicum HOM05D009074 ORTHO05D011606 3.2e-21 106.7 183 39.9
AL1G43120 Arabidopsis lyrata HOM05D009074 ORTHO05D011606 7.1e-21 105.5 170 44.1
Aa31LG9G11490 Aethionema arabicum HOM05D009074 ORTHO05D011606 9.3e-21 105.1 183 39.3
AL1G43110 Arabidopsis lyrata HOM05D009074 ORTHO05D011606 9.3e-21 105.1 170 44.1
AL1G22570 Arabidopsis lyrata HOM05D009074 ORTHO05D011606 1.6e-20 104.4 154 40.3
Carub.0002s1843 Capsella rubella HOM05D009074 ORTHO05D011606 3.1e-16 90.1 120 44.2
BraA07t28839Z Brassica rapa HOM05D009074 ORTHO05D011606 4.0e-16 89.7 122 44.3
C08p49060 Brassica napus HOM05D001104 ORTHO05D005861 5.3e-16 89.4 92 48.9
BcaC07g41832 Brassica carinata HOM05D001104 ORTHO05D039207 1.2e-15 88.2 104 46.2
BcaB08g37340 Brassica carinata HOM05D000129 ORTHO05D000997 2.6e-15 87.0 89 52.8
BcaB08g37344 Brassica carinata HOM05D005214 ORTHO05D005861 4.5e-15 86.3 68 60.3
C08p48970 Brassica napus HOM05D000075 ORTHO05D039207 5.8e-15 85.9 95 48.4
BcaC06g35452 Brassica carinata HOM05D009074 ORTHO05D011606 8.4e-14 82.0 67 56.7
A07p10370 Brassica napus HOM05D009074 ORTHO05D011606 8.4e-14 82.0 118 40.7
BolC7t42086H Brassica oleracea HOM05D009074 ORTHO05D011606 3.2e-13 80.1 95 43.2
BcaC05g28233 Brassica carinata HOM05D009074 ORTHO05D032380 1.6e-12 77.8 142 32.4
C08p49040 Brassica napus HOM05D001066 ORTHO05D000891 2.7e-12 77.0 77 48.1
C05p42860 Brassica napus HOM05D001049 ORTHO05D005951 1.8e-11 74.3 106 34.9
BolC5t33016H Brassica oleracea HOM05D009074 ORTHO05D032380 1.8e-11 74.3 106 34.9
BolC3t16105H Brassica oleracea HOM05D000300 ORTHO05D000383 1.1e-10 71.6 183 31.1
BcaC01g06786 Brassica carinata HOM05D000300 ORTHO05D000383 1.5e-10 71.2 153 33.3
CARHR249690 Cardamine hirsuta HOM05D000300 ORTHO05D000383 4.3e-10 69.7 174 28.7
Aa31LG5G1620 Aethionema arabicum HOM05D000300 ORTHO05D000383 5.6e-10 69.3 174 31.0
C03p38240 Brassica napus HOM05D000300 ORTHO05D000383 5.6e-10 69.3 179 30.2
AT1G02370 Arabidopsis thaliana HOM05D000300 ORTHO05D000383 9.6e-10 68.6 151 33.8
BcaC05g28234 Brassica carinata HOM05D009074 ORTHO05D032380 9.6e-10 68.6 129 31.8
BcaB01g02403 Brassica carinata HOM05D000300 ORTHO05D000383 1.6e-09 67.8 149 31.5
Aa31LG1G10000 Aethionema arabicum HOM05D000300 ORTHO05D000383 2.1e-09 67.4 186 31.7
A03p31320 Brassica napus HOM05D000300 ORTHO05D000383 2.1e-09 67.4 149 30.9
BraA03t12314Z Brassica rapa HOM05D000300 ORTHO05D000383 2.1e-09 67.4 149 30.9
Carub.0006s3524 Capsella rubella HOM05D000300 ORTHO05D000383 2.1e-09 67.4 152 32.2
AL1G11720 Arabidopsis lyrata HOM05D000300 ORTHO05D000383 2.8e-09 67.0 151 33.8
AL6G51260 Arabidopsis lyrata HOM05D000300 ORTHO05D000383 3.7e-09 66.6 189 30.2
C07p15930 Brassica napus HOM05D009074 ORTHO05D011606 3.7e-09 66.6 70 48.6
Aa31LG1G9990 Aethionema arabicum HOM05D000300 ORTHO05D000383 8.2e-09 65.5 186 31.7
AT1G11470 Arabidopsis thaliana HOM05D009074 ORTHO05D011606 1.4e-08 64.7 65 44.6
AL1G24010 Arabidopsis lyrata HOM05D009074 ORTHO05D023607 1.8e-08 64.3 88 37.5
AL1G24050 Arabidopsis lyrata HOM05D009074 ORTHO05D023607 1.8e-08 64.3 88 37.5
AT4G01990 Arabidopsis thaliana HOM05D000300 ORTHO05D000383 1.8e-08 64.3 174 30.5
Carub.0001s0142 Capsella rubella HOM05D000300 ORTHO05D000383 1.8e-08 64.3 150 32.7
AL1G24060 Arabidopsis lyrata HOM05D007060 ORTHO05D023607 4.0e-08 63.2 139 28.8
Thhalv10029427m.g Eutrema salsugineum HOM05D000300 ORTHO05D000383 4.0e-08 63.2 171 29.2
Thhalv10007036m.g Eutrema salsugineum HOM05D000300 ORTHO05D000383 9.0e-08 62.0 181 30.9
AL1G24720 Arabidopsis lyrata HOM05D009074 ORTHO05D023607 1.2e-07 61.6 122 29.5
BcaB03g15787 Brassica carinata HOM05D000300 ORTHO05D000383 1.2e-07 61.6 189 29.6
BraA10t42393Z Brassica rapa HOM05D000300 ORTHO05D000383 2.0e-07 60.8 186 30.1
Sp1g01450 Schrenkiella parvula HOM05D000300 ORTHO05D000383 3.4e-07 60.1 193 30.6
A10p01140 Brassica napus HOM05D000300 ORTHO05D000383 5.8e-07 59.3 187 29.4
C05p01170 Brassica napus HOM05D000300 ORTHO05D000383 5.8e-07 59.3 184 27.7
BcaC05g24618 Brassica carinata HOM05D000300 ORTHO05D000383 2.9e-06 57.0 184 27.2
BolC5t28899H Brassica oleracea HOM05D000300 ORTHO05D000383 2.9e-06 57.0 184 27.2
CARHR001690 Cardamine hirsuta HOM05D000300 ORTHO05D000383 3.8e-06 56.6 151 31.1
ECA247G1020 Erigeron canadensis HOM05D000300 ORTHO05D000383 8.4e-06 55.5 143 26.6


User provided reference genes

Program Settings