Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p64670 Brassica napus HOM05D009121 ORTHO05D001888 8.7e-85 317.0 169 100.0
BolC8t52391H Brassica oleracea HOM05D009121 ORTHO05D001888 7.4e-84 313.9 169 98.8
BraA09t41825Z Brassica rapa HOM05D009121 ORTHO05D001888 7.4e-84 313.9 169 99.4
C08p48520 Brassica napus HOM05D009121 ORTHO05D001888 1.6e-83 312.8 169 98.2
BcaB08g37374 Brassica carinata HOM05D009121 ORTHO05D001888 8.5e-80 300.4 169 93.5
BcaC05g24955 Brassica carinata HOM05D009121 ORTHO05D001888 1.3e-72 276.6 169 85.2
Thhalv10008932m.g Eutrema salsugineum HOM05D009121 ORTHO05D001888 5.5e-71 271.2 169 81.7
Sp1g09470 Schrenkiella parvula HOM05D009121 ORTHO05D001888 7.2e-71 270.8 169 81.7
BolC5t29657H Brassica oleracea HOM05D009121 ORTHO05D001888 2.1e-70 269.2 169 81.7
BcaC07g38628 Brassica carinata HOM05D009121 ORTHO05D001888 2.7e-70 268.9 167 83.2
C05p09130 Brassica napus HOM05D009121 ORTHO05D001888 4.7e-70 268.1 169 81.1
A06p07570 Brassica napus HOM05D009121 ORTHO05D001888 1.4e-69 266.5 169 81.7
BraA06t23959Z Brassica rapa HOM05D009121 ORTHO05D001888 1.4e-69 266.5 169 81.7
AL1G21700 Arabidopsis lyrata HOM05D009121 ORTHO05D001888 2.0e-65 252.7 169 76.3
Carub.0001s1032 Capsella rubella HOM05D009121 ORTHO05D001888 7.7e-65 250.8 167 76.6
AT1G10770 Arabidopsis thaliana HOM05D009121 ORTHO05D001888 1.3e-64 250.0 169 74.6
CARHR010990 Cardamine hirsuta HOM05D009121 ORTHO05D001888 5.0e-64 248.1 169 74.6
BcaC07g38589 Brassica carinata HOM05D009121 ORTHO05D001888 8.8e-61 237.3 167 76.0
Aa31LG2G9780 Aethionema arabicum HOM05D009121 ORTHO05D001888 1.1e-50 203.8 169 62.1
THA.LOC104809586 Tarenaya hassleriana HOM05D009121 ORTHO05D001888 3.1e-50 202.2 168 61.9
THA.LOC104819351 Tarenaya hassleriana HOM05D009121 ORTHO05D001888 1.2e-46 190.3 170 59.4
Carub.0002s0459 Capsella rubella HOM05D009121 ORTHO05D001888 1.8e-45 186.4 151 64.2
AL2G15820 Arabidopsis lyrata HOM05D009121 ORTHO05D001888 3.0e-45 185.7 169 58.6
AT1G60760 Arabidopsis thaliana HOM05D009121 ORTHO05D001888 8.8e-45 184.1 169 59.2
Sp2g04000 Schrenkiella parvula HOM05D009121 ORTHO05D001888 4.1e-42 175.3 168 56.0
Aa31LG1G4060 Aethionema arabicum HOM05D009121 ORTHO05D001888 3.8e-40 168.7 143 59.4
Thhalv10024081m.g Eutrema salsugineum HOM05D009121 ORTHO05D001888 2.5e-39 166.0 167 56.3
CARHR051730 Cardamine hirsuta HOM05D009121 ORTHO05D001888 3.3e-39 165.6 169 55.6
C09p21480 Brassica napus HOM05D009121 ORTHO05D001888 1.8e-34 149.8 151 52.3
BolC9t55053H Brassica oleracea HOM05D009121 ORTHO05D001888 1.8e-34 149.8 151 52.3
A09p17300 Brassica napus HOM05D009121 ORTHO05D001888 5.4e-34 148.3 168 48.8
BraA09t37359Z Brassica rapa HOM05D009121 ORTHO05D001888 5.4e-34 148.3 168 48.8
BcaNung05350 Brassica carinata HOM05D009121 ORTHO05D001888 2.7e-33 146.0 168 48.2
BolC8t49030H Brassica oleracea HOM05D009121 ORTHO05D001888 1.0e-32 144.1 94 78.7
C08p13970 Brassica napus HOM05D009121 ORTHO05D001888 2.8e-22 109.4 71 80.3
Sp3g05640 Schrenkiella parvula HOM05D005742 ORTHO05D001888 4.7e-14 82.0 137 33.6
Sed0022593 Sechium edule HOM05D008070 ORTHO05D001888 1.8e-13 80.1 131 32.1
Thhalv10022426m.g Eutrema salsugineum HOM05D005742 ORTHO05D001888 2.3e-13 79.7 147 32.0
AL1G37150 Arabidopsis lyrata HOM05D008070 ORTHO05D001888 5.2e-13 78.6 153 32.7
BcaB03g14151 Brassica carinata HOM05D008070 ORTHO05D001888 6.8e-13 78.2 159 35.2
THA.LOC104802706 Tarenaya hassleriana HOM05D005742 ORTHO05D001888 1.2e-12 77.4 139 35.3
AL3G17770 Arabidopsis lyrata HOM05D005742 ORTHO05D001888 1.5e-12 77.0 134 31.3
Carub.0001s2294 Capsella rubella HOM05D008070 ORTHO05D001888 1.5e-12 77.0 154 33.8
AT1G23350 Arabidopsis thaliana HOM05D008070 ORTHO05D001888 2.0e-12 76.6 153 32.7
BcaC09g47911 Brassica carinata HOM05D005742 ORTHO05D001888 3.4e-12 75.9 134 32.1
BolC1t05594H Brassica oleracea HOM05D005742 ORTHO05D001888 3.4e-12 75.9 134 32.1
ClCG08G017790 Citrullus lanatus HOM05D008070 ORTHO05D001888 5.8e-12 75.1 133 34.6
Ciclev10032926m.g Citrus clementina HOM05D008070 ORTHO05D001888 7.5e-12 74.7 165 28.5
MELO3C010682.2 Cucumis melo HOM05D008070 ORTHO05D001888 7.5e-12 74.7 155 31.6
CARHR081260 Cardamine hirsuta HOM05D005742 ORTHO05D001888 9.9e-12 74.3 150 31.3
CARHR023800 Cardamine hirsuta HOM05D008070 ORTHO05D001888 1.3e-11 73.9 146 34.2
BNapus_Darmor_BZH_scaffold_118p00010 Brassica napus HOM05D005742 ORTHO05D001888 1.7e-11 73.6 143 30.1
BraA01t04423Z Brassica rapa HOM05D005742 ORTHO05D001888 1.7e-11 73.6 143 30.1
Haze_12224 Corylus avellana HOM05D008070 ORTHO05D001888 1.7e-11 73.6 132 34.1
Carub.0003s0617 Capsella rubella HOM05D005742 ORTHO05D001888 2.2e-11 73.2 137 31.4
AT3G36659 Arabidopsis thaliana HOM05D005742 ORTHO05D001888 2.9e-11 72.8 139 31.7
BcaC06g35034 Brassica carinata HOM05D008070 ORTHO05D001888 2.9e-11 72.8 158 33.5
BolC7t42570H Brassica oleracea HOM05D008070 ORTHO05D001888 2.9e-11 72.8 160 34.4
THA.LOC104822159 Tarenaya hassleriana HOM05D008070 ORTHO05D001888 2.9e-11 72.8 153 32.7
BcaC05g30549 Brassica carinata HOM05D005742 ORTHO05D001888 3.7e-11 72.4 134 31.3
Sp1g20800 Schrenkiella parvula HOM05D008070 ORTHO05D001888 4.9e-11 72.0 154 31.8
TAR629G1731 Trochodendron aralioides HOM05D008070 ORTHO05D001888 4.9e-11 72.0 163 30.7
BraA07t29145Z Brassica rapa HOM05D008070 ORTHO05D001888 6.4e-11 71.6 162 35.8
BcaB07g32331 Brassica carinata HOM05D008070 ORTHO05D001888 8.3e-11 71.2 150 34.0
Aa31LG5G17240 Aethionema arabicum HOM05D005742 ORTHO05D001888 1.1e-10 70.9 157 29.3
BcaB03g11935 Brassica carinata HOM05D008070 ORTHO05D001888 1.1e-10 70.9 159 34.6
Aa31LG7G7380 Aethionema arabicum HOM05D008070 ORTHO05D001888 1.4e-10 70.5 154 32.5
BcaC05g26248 Brassica carinata HOM05D008070 ORTHO05D001888 1.4e-10 70.5 150 34.0
C05p22620 Brassica napus HOM05D008070 ORTHO05D001888 1.4e-10 70.5 150 34.0
BolC5t30961H Brassica oleracea HOM05D008070 ORTHO05D001888 1.4e-10 70.5 150 34.0
CsaV3_2G024840 Cucumis sativus L. HOM05D008070 ORTHO05D001888 1.9e-10 70.1 133 30.8
Thhalv10008931m.g Eutrema salsugineum HOM05D008070 ORTHO05D001888 1.9e-10 70.1 158 33.5
Cfa009190 Carpinus fangiana HOM05D008070 ORTHO05D001888 2.4e-10 69.7 152 31.6
THA.LOC104822979 Tarenaya hassleriana HOM05D008070 ORTHO05D001888 7.1e-10 68.2 156 32.7
Manes.12G025200 Manihot esculenta HOM05D008070 ORTHO05D001888 1.2e-09 67.4 161 28.6
QL03p058730 Quercus lobata HOM05D008070 ORTHO05D001888 1.2e-09 67.4 145 29.7
Eucgr.H02532 Eucalyptus grandis HOM05D008070 ORTHO05D001888 1.6e-09 67.0 162 26.5
CANSAT01G1404 Cannabis sativa HOM05D008070 ORTHO05D001888 7.8e-09 64.7 132 28.0
CiPaw.05G184900 Carya illinoinensis HOM05D008070 ORTHO05D001888 7.8e-09 64.7 152 28.3
TAR362G0759 Trochodendron aralioides HOM05D005742 ORTHO05D001888 7.8e-09 64.7 144 34.0
TAR622G1131 Trochodendron aralioides HOM05D008070 ORTHO05D001888 7.8e-09 64.7 161 29.2
BcaC07g39196 Brassica carinata HOM05D008070 ORTHO05D001888 1.0e-08 64.3 129 34.9
BolC8t49825H Brassica oleracea HOM05D008070 ORTHO05D001888 1.0e-08 64.3 129 34.9
Atru.chr11.2085 Acer truncatum HOM05D008070 ORTHO05D001888 1.3e-08 63.9 162 27.8
Atru.chr11.2086 Acer truncatum HOM05D008070 ORTHO05D001888 1.3e-08 63.9 162 27.8
C08p21860 Brassica napus HOM05D008070 ORTHO05D001888 1.3e-08 63.9 129 34.9
CsaV3_5G031330 Cucumis sativus L. HOM05D008070 ORTHO05D001888 1.7e-08 63.5 157 29.3
QL03p058723 Quercus lobata HOM05D010056 ORTHO05D001888 2.3e-08 63.2 135 28.9
THA.LOC104818886 Tarenaya hassleriana HOM05D005742 ORTHO05D001888 3.0e-08 62.8 135 28.9
COL.COLO4_24233 Corchorus olitorius HOM05D008070 ORTHO05D001888 3.9e-08 62.4 166 30.1
Nn3g21713 Nelumbo nucifera HOM05D005742 ORTHO05D001888 3.9e-08 62.4 145 29.0
MELO3C011974.2 Cucumis melo HOM05D008070 ORTHO05D001888 5.1e-08 62.0 152 26.3
Haze_01291 Corylus avellana HOM05D005742 ORTHO05D001888 6.6e-08 61.6 138 31.2
Manes.13G026900 Manihot esculenta HOM05D008070 ORTHO05D001888 6.6e-08 61.6 163 28.8
A08p28210 Brassica napus HOM05D008070 ORTHO05D001888 1.1e-07 60.8 160 30.6
BraA08t34752Z Brassica rapa HOM05D008070 ORTHO05D001888 1.1e-07 60.8 160 30.6
TAR633G1530 Trochodendron aralioides HOM05D005742 ORTHO05D001888 1.1e-07 60.8 144 34.0
Hma1.2p1_0013F.1_g008650 Hydrangea macrophylla HOM05D005742 ORTHO05D001888 1.9e-07 60.1 162 30.9
Gohir.D02G058775 Gossypium hirsutum HOM05D005742 ORTHO05D001888 2.5e-07 59.7 149 30.2
Gorai.005G066500 Gossypium raimondii HOM05D005742 ORTHO05D001888 2.5e-07 59.7 149 30.2
Cfa015324 Carpinus fangiana HOM05D005742 ORTHO05D001888 4.3e-07 58.9 152 27.6
DCAR_027000 Daucus carota HOM05D005742 ORTHO05D001888 4.3e-07 58.9 141 29.1
Rhsim04G0235100 Rhododendron simsii HOM05D005742 ORTHO05D001888 4.3e-07 58.9 141 28.4
vmacro08056 Vaccinium macrocarpon HOM05D001258 ORTHO05D000158 4.3e-07 58.9 153 28.8
CANSAT78G0521 Cannabis sativa HOM05D005742 ORTHO05D001888 7.3e-07 58.2 154 27.3
Sed0009222 Sechium edule HOM05D005742 ORTHO05D001888 7.3e-07 58.2 158 28.5
BraA09t39622Z Brassica rapa HOM05D008070 ORTHO05D001888 9.5e-07 57.8 113 34.5
Carub.0003s0619 Capsella rubella HOM05D005742 ORTHO05D001888 1.2e-06 57.4 125 32.8
A09p41290 Brassica napus HOM05D008070 ORTHO05D001888 1.6e-06 57.0 113 34.5
CiPaw.02G075500 Carya illinoinensis HOM05D005742 ORTHO05D001888 2.1e-06 56.6 141 28.4
Ciclev10007183m.g Citrus clementina HOM05D005742 ORTHO05D001888 2.1e-06 56.6 153 28.1
Sed0022116 Sechium edule HOM05D008070 ORTHO05D001888 2.1e-06 56.6 163 32.5
Ah.04g157100 Amaranthus hybridus HOM05D005742 ORTHO05D001888 2.8e-06 56.2 142 25.4
QL04p082607 Quercus lobata HOM05D010056 ORTHO05D001888 2.8e-06 56.2 164 23.8
CiPaw.06G069400 Carya illinoinensis HOM05D008070 ORTHO05D001888 3.6e-06 55.8 161 28.6
Dinv44293 Davidia involucrata HOM05D005742 ORTHO05D001888 4.7e-06 55.5 158 26.6
Duzib151G0239 Durio zibethinus HOM05D005742 ORTHO05D001888 8.1e-06 54.7 166 26.5
Gohir.A02G054001 Gossypium hirsutum HOM05D005742 ORTHO05D001888 8.1e-06 54.7 161 30.4


User provided reference genes

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