Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p63460 Brassica napus HOM05D004112 ORTHO05D004739 0.0e+00 1127.9 623 100.0
BraA09t41696Z Brassica rapa HOM05D004112 ORTHO05D004739 2.5e-294 1015.0 623 92.1
BolC8t52227H Brassica oleracea HOM05D004112 ORTHO05D004739 4.4e-275 951.0 626 88.0
C08p46920 Brassica napus HOM05D004112 ORTHO05D004739 1.6e-229 799.7 518 89.0
BcaB08g34232 Brassica carinata HOM05D004112 ORTHO05D004739 1.2e-227 793.5 626 77.8
Thhalv10007108m.g Eutrema salsugineum HOM05D004112 ORTHO05D004739 6.9e-220 767.7 650 72.3
Sp1g11580 Schrenkiella parvula HOM05D004112 ORTHO05D004739 4.3e-214 748.4 641 70.5
BcaC05g25092 Brassica carinata HOM05D004112 ORTHO05D004739 5.3e-204 714.9 644 69.9
AL1G24680 Arabidopsis lyrata HOM05D004112 ORTHO05D004739 1.9e-201 706.4 636 70.1
BolC5t29775H Brassica oleracea HOM05D000421 ORTHO05D004739 6.7e-199 698.0 634 69.6
A06p08680 Brassica napus HOM05D000421 ORTHO05D004739 5.9e-195 684.9 632 68.2
BraA06t24065Z Brassica rapa HOM05D000421 ORTHO05D004739 5.9e-195 684.9 632 68.2
Carub.0001s1278 Capsella rubella HOM05D004112 ORTHO05D004739 1.7e-194 683.3 639 67.0
C05p10290 Brassica napus HOM05D000421 ORTHO05D004739 3.7e-189 665.6 633 67.0
CARHR013360 Cardamine hirsuta HOM05D004112 ORTHO05D004739 3.7e-189 665.6 638 66.8
AT1G13030 Arabidopsis thaliana HOM05D004112 ORTHO05D004739 1.0e-178 630.9 638 65.4
Aa31LG1G1770 Aethionema arabicum HOM05D004112 ORTHO05D004739 3.6e-168 595.9 650 60.2
THA.LOC104805277 Tarenaya hassleriana HOM05D004112 ORTHO05D004739 4.0e-143 512.7 661 52.8
C05p09990 Brassica napus HOM05D004112 ORTHO05D004739 1.3e-112 411.4 433 58.9
Atru.chr11.2164 Acer truncatum HOM05D004112 ORTHO05D004739 5.0e-93 346.3 660 38.8
BolC5t29747H Brassica oleracea HOM05D004112 ORTHO05D027101 4.6e-91 339.7 383 66.1
BolC5t29741H Brassica oleracea HOM05D004112 ORTHO05D004739 3.0e-90 337.0 383 65.8
GSVIVG01000557001 Vitis vinifera HOM05D004112 ORTHO05D004739 1.3e-88 331.6 703 38.1
CiPaw.05G178200 Carya illinoinensis HOM05D004112 ORTHO05D004739 1.6e-88 331.3 650 36.9
Rhsim12G0039400 Rhododendron simsii HOM05D004112 ORTHO05D004739 8.2e-88 328.9 671 37.0
TAR622G0947 Trochodendron aralioides HOM05D004112 ORTHO05D004739 1.1e-87 328.6 670 35.7
Prupe.1G242900 Prunus persica HOM05D004112 ORTHO05D004739 2.4e-87 327.4 680 36.8
QL03p056879 Quercus lobata HOM05D004112 ORTHO05D004739 9.1e-87 325.5 654 37.8
Thecc.02G263400 Theobroma cacao HOM05D004112 ORTHO05D004739 1.0e-85 322.0 684 36.8
arahy.Tifrunner.gnm1.ann1.B4WRN4 Arachis hypogaea HOM05D004112 ORTHO05D004739 2.9e-85 320.5 673 36.6
Duzib268G0184 Durio zibethinus HOM05D004112 ORTHO05D004739 8.5e-85 318.9 667 36.1
Gohir.D01G152000 Gossypium hirsutum HOM05D004112 ORTHO05D004739 1.9e-84 317.8 668 36.2
MD16G1103100 Malus domestica HOM05D004112 ORTHO05D004739 3.0e-82 310.5 682 35.8
Lalb_Chr08g0230891 Lupinus albus HOM05D004112 ORTHO05D004739 1.5e-81 308.1 678 37.8
arahy.Tifrunner.gnm1.ann1.5BR3PR Arachis hypogaea HOM05D004112 ORTHO05D004739 3.3e-81 307.0 700 34.9
MD13G1102900 Malus domestica HOM05D004112 ORTHO05D004739 5.7e-81 306.2 694 34.6
TWI36G0458 Tripterygium wilfordii HOM05D004112 ORTHO05D004739 1.3e-80 305.1 726 34.0
Gorai.002G188300 Gossypium raimondii HOM05D004112 ORTHO05D004739 1.4e-79 301.6 701 33.8
vmacro01117 Vaccinium macrocarpon HOM05D004112 ORTHO05D004739 1.8e-79 301.2 589 38.2
FAN07G2897 Fragaria x ananassa HOM05D004112 ORTHO05D004739 4.1e-79 300.1 709 33.9
Gohir.A01G158700 Gossypium hirsutum HOM05D004112 ORTHO05D004739 2.0e-78 297.7 668 35.9
BcaC05g25061 Brassica carinata HOM05D004112 ORTHO05D027101 2.6e-78 297.4 376 60.4
Manes.13G021500 Manihot esculenta HOM05D004112 ORTHO05D004739 3.4e-78 297.0 650 39.7
COL.COLO4_23486 Corchorus olitorius HOM05D004112 ORTHO05D004739 4.5e-78 296.6 691 34.7
Lj6g0012261 Lotus japonicus HOM05D004112 ORTHO05D004739 5.9e-78 296.2 660 36.2
Dinv15208 Davidia involucrata HOM05D004112 ORTHO05D004739 7.7e-78 295.8 735 37.8
FAN17G0775 Fragaria x ananassa HOM05D004112 ORTHO05D004739 2.9e-77 293.9 717 33.5
FvH4_4g25440 Fragaria vesca HOM05D004112 ORTHO05D004739 5.0e-77 293.1 711 35.2
Phvul.001G255700 Phaseolus vulgaris HOM05D004112 ORTHO05D004739 5.0e-77 293.1 704 34.7
Nn3g16670 Nelumbo nucifera HOM05D004112 ORTHO05D004739 1.9e-76 291.2 678 36.9
Cc11_g15970 Coffea canephora HOM05D004112 ORTHO05D004739 7.2e-76 289.3 727 34.4
CsaV3_5G030980 Cucumis sativus L. HOM05D004112 ORTHO05D004739 7.2e-76 289.3 670 34.3
Eucgr.H02474 Eucalyptus grandis HOM05D004112 ORTHO05D004739 7.2e-76 289.3 675 37.3
Ciclev10030867m.g Citrus clementina HOM05D004112 ORTHO05D004739 1.2e-75 288.5 717 34.2
ClCG05G025880 Citrullus lanatus HOM05D004112 ORTHO05D004739 1.6e-75 288.1 672 34.1
Potri.008G185100 Populus trichocarpa HOM05D004112 ORTHO05D004739 4.7e-75 286.6 703 34.3
FAN12G3846 Fragaria x ananassa HOM05D004112 ORTHO05D004739 6.1e-75 286.2 712 33.1
MELO3C011937.2 Cucumis melo HOM05D004112 ORTHO05D004739 7.9e-75 285.8 674 34.3
FAN22G2105 Fragaria x ananassa HOM05D004112 ORTHO05D004739 1.4e-74 285.0 713 33.4
DCAR_007043 Daucus carota HOM05D004112 ORTHO05D004739 5.2e-74 283.1 687 32.9
VMungo1383G0113 Vigna mungo HOM05D004112 ORTHO05D004739 6.7e-74 282.7 666 35.3
RcHm_v2.0_Chr4g0432751 Rosa chinensis HOM05D004112 ORTHO05D004739 1.1e-73 282.0 730 34.0
CSS0023851 Camellia sinensis var. sinensis HOM05D004112 ORTHO05D004739 1.5e-73 281.6 678 35.1
Lalb_Chr23g0277631 Lupinus albus HOM05D004112 ORTHO05D004739 2.0e-73 281.2 705 37.4
Sabra10G0020400 Salix brachista HOM05D004112 ORTHO05D004739 2.6e-73 280.8 703 33.3
CiPaw.06G066400 Carya illinoinensis HOM05D004112 ORTHO05D004739 4.4e-73 280.0 645 34.7
BcaC05g25410 Brassica carinata HOM05D004112 ORTHO05D004739 1.7e-72 278.1 354 52.8
TWI18G0097 Tripterygium wilfordii HOM05D004112 ORTHO05D004739 6.3e-72 276.2 670 33.9
Sed0023093 Sechium edule HOM05D004112 ORTHO05D004739 1.4e-71 275.0 702 33.5
CANSAT01G3092 Cannabis sativa HOM05D004112 ORTHO05D004739 2.4e-71 274.2 737 31.9
Dinv14739 Davidia involucrata HOM05D004112 ORTHO05D004739 5.3e-71 273.1 650 34.5
Potri.010G048700 Populus trichocarpa HOM05D004112 ORTHO05D004739 2.0e-70 271.2 705 31.3
PGR119G0183 Punica granatum HOM05D004112 ORTHO05D004739 5.9e-70 269.6 721 34.1
Aqoxy3G01258 Aquilegia oxysepala HOM05D004112 ORTHO05D004739 1.9e-68 264.6 713 32.0
CSS0011275 Camellia sinensis var. sinensis HOM05D004112 ORTHO05D004739 5.5e-68 263.1 625 34.2
PSO478G3171 Papaver somniferum HOM05D004112 ORTHO05D004739 1.4e-66 258.5 666 33.0
Actinidia01360 Actinidia chinensis HOM05D004112 ORTHO05D004739 1.8e-66 258.1 656 33.8
Hund25400 Selenicereus undatus HOM05D004112 ORTHO05D004739 2.3e-66 257.7 672 32.4
C05p12860 Brassica napus HOM05D000639 ORTHO05D032511 1.2e-65 255.4 354 50.8
Glyma.11G243800 Glycine max HOM05D004112 ORTHO05D004739 7.5e-65 252.7 677 33.7
ATR0122G036 Amborella trichopoda HOM05D004112 ORTHO05D004739 5.9e-62 243.0 687 33.3
Psat5g091840 Pisum sativum HOM05D004112 ORTHO05D004739 5.9e-62 243.0 677 35.3
Glyma.18G013300 Glycine max HOM05D004112 ORTHO05D004739 3.8e-61 240.4 387 45.0
Actinidia37446 Actinidia chinensis HOM05D004112 ORTHO05D004739 3.2e-60 237.3 725 32.6
Actinidia08126 Actinidia chinensis HOM05D004112 ORTHO05D004739 9.4e-60 235.7 664 32.8
HanXRQChr12g0371721 Helianthus annuus HOM05D004112 ORTHO05D004739 2.1e-59 234.6 661 34.6
Migut.K00616 Erythranthe guttata HOM05D004112 ORTHO05D004739 4.7e-59 233.4 796 29.9
EL10Ac6g13879 Beta vulgaris HOM05D004112 ORTHO05D004739 1.0e-58 232.3 729 30.7
TPR.G30525 Trifolium pratense HOM05D004112 ORTHO05D004739 1.0e-58 232.3 734 30.7
ECA233G4780 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.8e-58 229.2 648 32.4
Cfa009235 Carpinus fangiana HOM05D004112 ORTHO05D004739 1.5e-57 228.4 636 31.4
SGA_v2.0_scaffold476G52145 Striga asiatica HOM05D004112 ORTHO05D004739 5.7e-57 226.5 734 29.2
Peaxi162Scf00128g00449 Petunia axillaris HOM05D004112 ORTHO05D004739 6.3e-56 223.0 756 30.4
Solyc05g013740.3 Solanum lycopersicum HOM05D004112 ORTHO05D004739 6.3e-56 223.0 853 30.0
Actinidia15108 Actinidia chinensis HOM05D004112 ORTHO05D004739 8.3e-56 222.6 734 32.4
Ca_25135_v3 Cicer arietinum L. HOM05D004112 ORTHO05D004739 1.1e-55 222.2 658 32.7
Medtr3g086550 Medicago truncatula HOM05D004112 ORTHO05D004739 1.8e-55 221.5 804 28.0
Sopen05g008660 Solanum pennellii HOM05D004112 ORTHO05D004739 1.2e-54 218.8 869 29.7
ECA246G3212 Erigeron canadensis HOM05D004112 ORTHO05D004739 1.6e-54 218.4 599 32.2
Nitab4.5_0000524g0060 Nicotiana tabacum HOM05D004112 ORTHO05D004739 1.6e-54 218.4 811 31.6
vmacro16177 Vaccinium macrocarpon HOM05D004112 ORTHO05D004739 1.6e-54 218.4 656 34.1
Sc26g0001570 Simmondsia chinensis HOM05D004112 ORTHO05D004739 2.0e-54 218.0 588 32.0
Ah.02g130260 Amaranthus hybridus HOM05D004112 ORTHO05D004739 2.7e-54 217.6 728 31.3
Nitab4.5_0001978g0040 Nicotiana tabacum HOM05D004112 ORTHO05D004739 1.0e-53 215.7 872 30.2
Hund06041 Selenicereus undatus HOM05D004112 ORTHO05D004739 1.3e-53 215.3 758 28.4
unitig_22.g6943 Utricularia gibba HOM05D004112 ORTHO05D004739 6.5e-53 213.0 749 29.8
Haze_12270 Corylus avellana HOM05D004112 ORTHO05D004739 2.5e-52 211.1 684 31.9
Manes.12G021100 Manihot esculenta HOM05D004112 ORTHO05D004739 2.8e-51 207.6 421 39.2
Lsat_1_v5_gn_8_152820 Lactuca sativa HOM05D004112 ORTHO05D004739 3.0e-50 204.1 725 30.3
Lsat_1_v5_gn_3_30221 Lactuca sativa HOM05D004112 ORTHO05D004739 7.5e-49 199.5 663 32.6
DCAR_026503 Daucus carota HOM05D004112 ORTHO05D004739 4.1e-47 193.7 627 30.6
HanXRQChr11g0329171 Helianthus annuus HOM05D004112 ORTHO05D004739 9.2e-47 192.6 650 31.4
AUR62024236 Chenopodium quinoa HOM05D004112 ORTHO05D004739 1.6e-46 191.8 785 27.6
Zm00001eb084730 Zea mays HOM05D004112 ORTHO05D004739 3.5e-46 190.7 680 32.1
SalBow2G2073 Salvia bowleyana HOM05D004112 ORTHO05D004739 1.9e-44 184.9 754 26.4
Zm00001eb421500 Zea mays HOM05D004112 ORTHO05D004739 4.3e-44 183.7 681 28.6
ClCG08G017620 Citrullus lanatus HOM05D004112 ORTHO05D004739 1.6e-43 181.8 631 29.8
Rhsim12G0108400 Rhododendron simsii HOM05D004112 ORTHO05D004739 6.1e-43 179.9 636 33.0
AUR62005505 Chenopodium quinoa HOM05D004112 ORTHO05D004739 1.4e-42 178.7 709 27.9
Sed0015104 Sechium edule HOM05D004112 ORTHO05D004739 8.9e-42 176.0 621 29.3
CDE09G0121 Ceratophyllum demersum HOM05D004112 ORTHO05D004739 4.9e-40 170.2 689 28.9
Oeu057548.1 Olea europaea HOM05D004112 ORTHO05D004739 8.3e-40 169.5 579 29.0
CsaV3_2G025020 Cucumis sativus L. HOM05D004112 ORTHO05D004739 1.8e-39 168.3 629 29.1
MELO3C010699.2 Cucumis melo HOM05D004112 ORTHO05D004739 5.4e-39 166.8 623 28.4
BolC5t30033H Brassica oleracea HOM05D000639 ORTHO05D032511 1.4e-34 152.1 163 64.4
BolC2t12020H Brassica oleracea HOM05D004112 ORTHO05D004739 1.2e-33 149.1 276 42.8
HanXRQChr17g0539921 Helianthus annuus HOM05D004112 ORTHO05D004739 1.2e-33 149.1 630 34.0
HPP92_024299 Vanilla planifolia HOM05D004112 ORTHO05D004739 2.9e-32 144.4 829 24.7
CAN.G272.6 Capsicum annuum HOM05D004112 ORTHO05D004739 1.7e-29 135.2 215 40.0
Os12g0288600 Oryza sativa ssp. japonica HOM05D004112 ORTHO05D004739 1.7e-29 135.2 491 29.9
SEGI_13723 Sequoiadendron giganteum HOM05D004112 ORTHO05D004739 2.8e-27 127.9 230 36.5
Pp3c16_2520 Physcomitrium patens HOM05D004112 ORTHO05D004739 1.1e-26 125.9 732 25.8
Hma1.2p1_0815F.1_g222710 Hydrangea macrophylla HOM05D004112 ORTHO05D004739 4.0e-26 124.0 158 43.7
Mapoly0010s0205 Marchantia polymorpha HOM05D004112 ORTHO05D004739 4.0e-26 124.0 717 24.5
Hma1.2p1_0079F.1_g041130 Hydrangea macrophylla HOM05D004112 ORTHO05D004739 1.2e-25 122.5 328 32.9
BcaC05g25060 Brassica carinata HOM05D021208 ORTHO05D027101 9.9e-25 119.4 167 65.9
CAN.G979.7 Capsicum annuum HOM05D004112 ORTHO05D004739 1.4e-23 115.5 322 31.4
Nitab4.5_0005916g0010 Nicotiana tabacum HOM05D002060 ORTHO05D002098 1.4e-23 115.5 322 32.9
Solyc02g067090.4 Solanum lycopersicum HOM05D004112 ORTHO05D004739 2.4e-23 114.8 314 33.8
Sopen02g016280 Solanum pennellii HOM05D004112 ORTHO05D004739 1.6e-22 112.1 308 31.8
Nitab4.5_0000212g0200 Nicotiana tabacum HOM05D002060 ORTHO05D002098 2.7e-22 111.3 332 32.2
Hma1.2p1_0815F.1_g222700 Hydrangea macrophylla HOM05D004112 ORTHO05D004739 1.3e-21 109.0 161 39.1
PGSC0003DMG400025149 Solanum tuberosum HOM05D004112 ORTHO05D004739 3.0e-21 107.8 311 32.5
Ah.08g219390 Amaranthus hybridus HOM05D004112 ORTHO05D004739 5.6e-20 103.6 123 46.3
Oeu059775.2 Olea europaea HOM05D004112 ORTHO05D004739 5.6e-20 103.6 85 52.9
Lsat_1_v5_gn_8_152740 Lactuca sativa HOM05D000214 ORTHO05D000131 4.7e-19 100.5 158 33.5
SHI17819 Sapria himalayana HOM05D004112 ORTHO05D004739 7.6e-17 93.2 162 36.4
Ah.03g133390 Amaranthus hybridus HOM05D004112 ORTHO05D004739 9.9e-17 92.8 551 26.1
Sed0006330 Sechium edule HOM05D004112 ORTHO05D004739 1.3e-16 92.4 423 28.4
Peaxi162Scf00117g00212 Petunia axillaris HOM05D004112 ORTHO05D004739 2.9e-16 91.3 433 25.9
AagrBONN_evm.TU.Sc2ySwM_368.3384 Anthoceros agrestis HOM05D004112 ORTHO05D004739 4.1e-15 87.4 689 24.7
Os12g0288801 Oryza sativa ssp. japonica HOM05D004112 ORTHO05D004739 5.4e-15 87.0 84 48.8
Peaxi162Scf00067g00115 Petunia axillaris HOM05D004112 ORTHO05D004739 4.6e-14 84.0 79 54.4
CANSAT56G3164 Cannabis sativa HOM05D004112 ORTHO05D004739 1.0e-13 82.8 140 40.0
CsaV3_2G034300 Cucumis sativus L. HOM05D004112 ORTHO05D004739 3.6e-11 74.3 177 34.5
PGR042G2157 Punica granatum HOM05D004112 ORTHO05D004739 3.1e-10 71.2 60 56.7
Lj2C1008T10 Lonicera japonica HOM05D004112 ORTHO05D004739 4.0e-10 70.9 351 30.2
Hma1.2p1_0900F.1_g234630 Hydrangea macrophylla HOM05D004112 ORTHO05D004739 6.9e-10 70.1 62 51.6
Pp3c26_4720 Physcomitrium patens HOM05D027689 ORTHO05D018028 1.2e-09 69.3 82 42.7
Pp3c4_25420 Physcomitrium patens HOM05D004112 ORTHO05D004739 9.9e-09 66.2 82 45.1
SHI17828 Sapria himalayana HOM05D004112 ORTHO05D004739 1.3e-08 65.9 88 42.0
HPP92_015941 Vanilla planifolia HOM05D004112 ORTHO05D004739 1.3e-08 65.9 82 41.5
HPP92_015914 Vanilla planifolia HOM05D004112 ORTHO05D004739 2.2e-08 65.1 82 41.5
Hma1.2p1_0900F.1_g234620 Hydrangea macrophylla HOM05D004112 ORTHO05D004739 7.8e-06 56.6 100 37.0


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