Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p59720 Brassica napus HOM05D007067 ORTHO05D008864 4.3e-95 351.3 172 100.0
BraA09t41348Z Brassica rapa HOM05D007067 ORTHO05D008864 4.3e-95 351.3 172 100.0
C08p43060 Brassica napus HOM05D007067 ORTHO05D008864 1.4e-93 346.3 172 98.3
BcaB03g14481 Brassica carinata HOM05D007067 ORTHO05D008864 2.3e-88 328.9 174 94.8
C05p17040 Brassica napus HOM05D007067 ORTHO05D008864 4.3e-87 324.7 171 93.0
BolC5t30410H Brassica oleracea HOM05D007067 ORTHO05D008864 4.3e-87 324.7 171 93.0
CARHR019370 Cardamine hirsuta HOM05D007067 ORTHO05D008864 1.2e-86 323.2 176 91.5
Sp1g16740 Schrenkiella parvula HOM05D007067 ORTHO05D008864 6.2e-86 320.9 176 91.5
AL1G31200 Arabidopsis lyrata HOM05D007067 ORTHO05D008864 1.4e-85 319.7 176 91.5
Thhalv10008902m.g Eutrema salsugineum HOM05D007067 ORTHO05D008864 6.8e-85 317.4 176 89.8
A06p14840 Brassica napus HOM05D007067 ORTHO05D008864 1.2e-84 316.6 171 91.2
BraA06t24606Z Brassica rapa HOM05D007067 ORTHO05D008864 1.2e-84 316.6 171 91.2
Carub.0001s1838 Capsella rubella HOM05D007067 ORTHO05D008864 7.5e-84 313.9 177 89.8
AT1G18730 Arabidopsis thaliana HOM05D007067 ORTHO05D008864 9.8e-84 313.5 176 89.2
BcaC05g25773 Brassica carinata HOM05D007067 ORTHO05D008864 1.7e-83 312.8 171 91.2
BcaB07g31890 Brassica carinata HOM05D007067 ORTHO05D008864 8.3e-83 310.5 177 89.3
BolC8t51861H Brassica oleracea HOM05D007067 ORTHO05D008864 1.6e-78 296.2 180 85.6
THA.LOC104808257 Tarenaya hassleriana HOM05D007067 ORTHO05D008864 5.8e-60 234.6 186 69.4
BcaC07g41296 Brassica carinata HOM05D007067 ORTHO05D008864 1.3e-59 233.4 136 83.8
Aa31LG7G3520 Aethionema arabicum HOM05D007067 ORTHO05D008864 8.7e-56 220.7 116 88.8
Cpa.g.sc111.20 Carica papaya HOM05D007067 ORTHO05D008864 2.2e-51 206.1 132 77.3
TWI60G1483 Tripterygium wilfordii HOM05D007067 ORTHO05D008864 2.2e-51 206.1 187 61.0
CSS0040643 Camellia sinensis var. sinensis HOM05D007067 ORTHO05D008864 4.9e-51 204.9 159 66.0
Cc04_g16320 Coffea canephora HOM05D007067 ORTHO05D008864 1.9e-50 203.0 130 74.6
Potri.012G068500 Populus trichocarpa HOM05D007067 ORTHO05D008864 1.9e-50 203.0 148 68.9
Sabra12G0047100 Salix brachista HOM05D007067 ORTHO05D008864 2.4e-50 202.6 146 69.9
GSVIVG01004672001 Vitis vinifera HOM05D007067 ORTHO05D008864 9.3e-50 200.7 146 67.8
GSVIVG01005334001 Vitis vinifera HOM05D007067 ORTHO05D008864 9.3e-50 200.7 146 67.8
Eucgr.K02487 Eucalyptus grandis HOM05D007067 ORTHO05D008864 1.2e-49 200.3 128 76.6
Actinidia04879 Actinidia chinensis HOM05D007067 ORTHO05D008864 2.1e-49 199.5 170 62.9
Nn3g17293 Nelumbo nucifera HOM05D007067 ORTHO05D008864 4.6e-49 198.4 187 57.8
CAN.G846.12 Capsicum annuum HOM05D007067 ORTHO05D008864 6.0e-49 198.0 124 77.4
Hma1.2p1_0637F.1_g193620 Hydrangea macrophylla HOM05D007067 ORTHO05D008864 7.9e-49 197.6 129 75.2
EL10Ac5g11044 Beta vulgaris HOM05D007067 ORTHO05D008864 1.0e-48 197.2 186 59.1
TAR622G0622 Trochodendron aralioides HOM05D007067 ORTHO05D008864 1.0e-48 197.2 144 67.4
CiPaw.11G046200 Carya illinoinensis HOM05D007067 ORTHO05D008864 1.3e-48 196.8 149 68.5
Duzib205G1209 Durio zibethinus HOM05D007067 ORTHO05D008864 1.3e-48 196.8 186 60.8
MD14G1202700 Malus domestica HOM05D007067 ORTHO05D008864 2.3e-48 196.1 178 60.7
SalBow3G2729 Salvia bowleyana HOM05D007067 ORTHO05D008864 3.0e-48 195.7 179 61.5
PGSC0003DMG400021933 Solanum tuberosum HOM05D007067 ORTHO05D008864 3.0e-48 195.7 169 62.1
CANSAT56G4102 Cannabis sativa HOM05D007067 ORTHO05D008864 3.9e-48 195.3 157 66.9
AUR62008437 Chenopodium quinoa HOM05D007067 ORTHO05D008864 3.9e-48 195.3 127 74.0
DCAR_016569 Daucus carota HOM05D007067 ORTHO05D008864 5.1e-48 194.9 167 62.9
Nitab4.5_0003381g0030 Nicotiana tabacum HOM05D007067 ORTHO05D008864 5.1e-48 194.9 120 78.3
Nitab4.5_0005226g0040 Nicotiana tabacum HOM05D007067 ORTHO05D008864 5.1e-48 194.9 120 78.3
Prupe.5G195500 Prunus persica HOM05D007067 ORTHO05D008864 6.7e-48 194.5 183 59.6
QL10p017305 Quercus lobata HOM05D007067 ORTHO05D008864 8.7e-48 194.1 172 58.7
MD06G1195600 Malus domestica HOM05D007067 ORTHO05D008864 1.1e-47 193.7 176 60.2
Manes.06G091000 Manihot esculenta HOM05D007067 ORTHO05D008864 1.1e-47 193.7 187 58.3
Migut.D01803 Erythranthe guttata HOM05D007067 ORTHO05D008864 1.5e-47 193.4 183 57.9
Gohir.D03G093800 Gossypium hirsutum HOM05D007067 ORTHO05D008864 1.9e-47 193.0 142 69.7
Peaxi162Scf00106g00326 Petunia axillaris HOM05D007067 ORTHO05D008864 1.9e-47 193.0 120 77.5
Gohir.A03G067300 Gossypium hirsutum HOM05D007067 ORTHO05D008864 3.3e-47 192.2 142 69.7
Gorai.003G097800 Gossypium raimondii HOM05D007067 ORTHO05D008864 3.3e-47 192.2 142 69.7
Solyc12g036170.2 Solanum lycopersicum HOM05D007067 ORTHO05D008864 3.3e-47 192.2 171 62.0
Sopen12g016290 Solanum pennellii HOM05D007067 ORTHO05D008864 4.3e-47 191.8 120 76.7
MBI02_g12272_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 7.4e-47 191.0 168 62.5
Cfa018925 Carpinus fangiana HOM05D007067 ORTHO05D008864 9.6e-47 190.7 148 66.9
CDE02G3919 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 9.6e-47 190.7 124 75.0
Lsat_1_v5_gn_5_20880 Lactuca sativa HOM05D007067 ORTHO05D008864 9.6e-47 190.7 117 77.8
Lj5A109T72 Lonicera japonica HOM05D007067 ORTHO05D008864 1.3e-46 190.3 148 64.9
PSO063G5395 Papaver somniferum HOM05D007067 ORTHO05D008864 1.6e-46 189.9 124 72.6
PSO832G0421 Papaver somniferum HOM05D007067 ORTHO05D008864 1.6e-46 189.9 124 72.6
Rhsim08G0153200 Rhododendron simsii HOM05D007067 ORTHO05D008864 2.1e-46 189.5 147 66.0
Sed0012968 Sechium edule HOM05D007067 ORTHO05D008864 2.1e-46 189.5 165 63.0
Thecc.03G091100 Theobroma cacao HOM05D007067 ORTHO05D008864 2.8e-46 189.1 186 58.1
Glyma.04G167400 Glycine max HOM05D007067 ORTHO05D008864 8.1e-46 187.6 167 61.1
Medtr3g435320 Medicago truncatula HOM05D007067 ORTHO05D008864 1.1e-45 187.2 178 57.3
Atru.chr9.195 Acer truncatum HOM05D007067 ORTHO05D008864 1.4e-45 186.8 175 60.0
MSTRG.9621 Avicennia marina HOM05D007067 ORTHO05D008864 1.8e-45 186.4 176 56.2
vmacro17532 Vaccinium macrocarpon HOM05D007067 ORTHO05D008864 1.8e-45 186.4 143 65.0
Lj1g0007284 Lotus japonicus HOM05D007067 ORTHO05D008864 2.4e-45 186.0 132 69.7
MELO3C017182.2 Cucumis melo HOM05D007067 ORTHO05D008864 5.3e-45 184.9 128 72.7
HanXRQChr05g0156061 Helianthus annuus HOM05D007067 ORTHO05D008864 6.9e-45 184.5 164 59.8
unitig_0.g778 Utricularia gibba HOM05D007067 ORTHO05D008864 6.9e-45 184.5 181 56.4
CsaV3_1G002440 Cucumis sativus L. HOM05D007067 ORTHO05D008864 9.0e-45 184.1 128 72.7
Glyma.06G195200 Glycine max HOM05D007067 ORTHO05D008864 9.0e-45 184.1 158 62.0
TPR.G11876 Trifolium pratense HOM05D007067 ORTHO05D008864 9.0e-45 184.1 183 55.7
Ca_27682_v3 Cicer arietinum L. HOM05D007067 ORTHO05D008864 1.5e-44 183.3 182 56.0
Peaxi162Scf00106g00037 Petunia axillaris HOM05D007067 ORTHO05D008864 1.5e-44 183.3 111 77.5
CDE09G1053 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 2.0e-44 183.0 129 69.8
ClCG06G016120 Citrullus lanatus HOM05D007067 ORTHO05D008864 2.6e-44 182.6 128 71.1
ECA246G0430 Erigeron canadensis HOM05D007067 ORTHO05D008864 4.5e-44 181.8 116 74.1
PGR044G1431 Punica granatum HOM05D007067 ORTHO05D008864 4.5e-44 181.8 126 70.6
RcHm_v2.0_Chr7g0181701 Rosa chinensis HOM05D007067 ORTHO05D008864 5.8e-44 181.4 188 57.4
Dinv38731 Davidia involucrata HOM05D007067 ORTHO05D008864 9.9e-44 180.6 113 73.5
Lalb_Chr08g0235641 Lupinus albus HOM05D007067 ORTHO05D008864 9.9e-44 180.6 154 60.4
FAN08G0270 Fragaria x ananassa HOM05D007067 ORTHO05D008864 2.2e-43 179.5 187 56.7
FAN13G0188 Fragaria x ananassa HOM05D007067 ORTHO05D008864 2.2e-43 179.5 187 56.7
FAN18G1220 Fragaria x ananassa HOM05D007067 ORTHO05D008864 2.2e-43 179.5 187 56.7
Psat5g201280 Pisum sativum HOM05D007067 ORTHO05D008864 2.9e-43 179.1 164 57.9
Aqoxy3G00483 Aquilegia oxysepala HOM05D007067 ORTHO05D008864 4.9e-43 178.3 184 56.5
Phvul.009G186200 Phaseolus vulgaris HOM05D007067 ORTHO05D008864 4.9e-43 178.3 127 70.1
ATR0564G121 Amborella trichopoda HOM05D007067 ORTHO05D008864 1.4e-42 176.8 161 58.4
Eucgr.K02485 Eucalyptus grandis HOM05D007067 ORTHO05D008864 1.4e-42 176.8 114 73.7
MBI02_g23462_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 7.1e-42 174.5 107 75.7
arahy.Tifrunner.gnm1.ann1.V8ZK3N Arachis hypogaea HOM05D007067 ORTHO05D008864 4.6e-41 171.8 156 59.6
arahy.Tifrunner.gnm1.ann1.JMB3VF Arachis hypogaea HOM05D007067 ORTHO05D008864 7.9e-41 171.0 156 60.3
Os02g0744000 Oryza sativa ssp. japonica HOM05D007067 ORTHO05D008864 5.5e-34 148.3 144 52.8
Zm00001eb254450 Zea mays HOM05D007067 ORTHO05D008864 1.2e-33 147.1 111 62.2
AUR62021654 Chenopodium quinoa HOM05D007067 ORTHO05D008864 7.9e-33 144.4 89 73.0
COL.COLO4_28333 Corchorus olitorius HOM05D007067 ORTHO05D008864 1.5e-28 130.2 144 56.2
SEGI_39094 Sequoiadendron giganteum HOM05D007067 ORTHO05D008864 4.6e-25 118.6 141 48.2
CBR_g30507 Chara braunii HOM05D007067 ORTHO05D008864 1.5e-23 113.6 141 44.7
Mapoly0149s0008 Marchantia polymorpha HOM05D007067 ORTHO05D008864 4.5e-20 102.1 97 47.4
Rhsim08G0153500 Rhododendron simsii HOM05D007067 ORTHO05D008864 5.9e-20 101.7 61 82.0
Ciclev10022880m.g Citrus clementina HOM05D007067 ORTHO05D008864 2.2e-19 99.8 96 54.2
Pp3c16_3930 Physcomitrium patens HOM05D007067 ORTHO05D008864 8.5e-19 97.8 88 51.1
FvH4_5g14690 Fragaria vesca HOM05D007067 ORTHO05D008864 1.4e-13 80.5 126 44.4
COL.COLO4_28352 Corchorus olitorius HOM05D004600 ORTHO05D005471 8.0e-09 64.7 63 61.9
Ah.11g048310 Amaranthus hybridus HOM05D007067 ORTHO05D008864 4.4e-07 58.9 46 60.9


User provided reference genes

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