Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p59090 Brassica napus HOM05D003954 ORTHO05D004627 1.6e-310 1068.5 521 100.0
BraA09t41292Z Brassica rapa HOM05D003954 ORTHO05D004627 7.8e-310 1066.2 521 99.6
C08p42370 Brassica napus HOM05D003954 ORTHO05D004627 6.6e-309 1063.1 521 99.4
BolC8t51799H Brassica oleracea HOM05D003954 ORTHO05D004627 6.6e-309 1063.1 521 99.4
BcaC07g41232 Brassica carinata HOM05D003954 ORTHO05D004627 2.8e-307 1057.7 521 98.8
BcaB08g34891 Brassica carinata HOM05D003954 ORTHO05D004627 1.4e-306 1055.4 521 98.3
Sp3g33220 Schrenkiella parvula HOM05D003954 ORTHO05D004627 2.6e-297 1024.6 521 95.0
Thhalv10001962m.g Eutrema salsugineum HOM05D003954 ORTHO05D004627 4.6e-294 1013.8 521 93.5
BcaC04g22815 Brassica carinata HOM05D003954 ORTHO05D004627 1.8e-293 1011.9 521 93.7
C09p15000 Brassica napus HOM05D003954 ORTHO05D004627 1.8e-293 1011.9 521 93.7
BcaB03g16776 Brassica carinata HOM05D003954 ORTHO05D004627 1.1e-292 1009.2 520 92.9
BolC9t54402H Brassica oleracea HOM05D003954 ORTHO05D004627 1.5e-292 1008.8 522 93.5
AL3G48340 Arabidopsis lyrata HOM05D003954 ORTHO05D004627 2.5e-292 1008.1 521 93.1
AT2G19880 Arabidopsis thaliana HOM05D003954 ORTHO05D004627 4.3e-292 1007.3 521 92.7
BcaC06g36652 Brassica carinata HOM05D003954 ORTHO05D004627 4.3e-292 1007.3 520 92.7
BolC7t40584H Brassica oleracea HOM05D003954 ORTHO05D004627 4.3e-292 1007.3 520 92.7
BraA07t27878Z Brassica rapa HOM05D003954 ORTHO05D004627 2.8e-291 1004.6 520 92.7
A07p00800 Brassica napus HOM05D003954 ORTHO05D004627 3.7e-291 1004.2 520 92.7
BraA09t36909Z Brassica rapa HOM05D003954 ORTHO05D004627 3.4e-289 997.7 525 92.4
Carub.0003s3415 Capsella rubella HOM05D003954 ORTHO05D004627 4.5e-289 997.3 521 91.9
CARHR110320 Cardamine hirsuta HOM05D003954 ORTHO05D004627 1.4e-287 992.3 521 91.0
Aa31LG8G16830 Aethionema arabicum HOM05D003954 ORTHO05D004627 1.8e-285 985.3 521 90.4
THA.LOC104814571 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 2.2e-275 951.8 521 86.6
THA.LOC104804008 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 1.0e-269 932.9 521 84.6
Cpa.g.sc40.95 Carica papaya HOM05D003954 ORTHO05D004627 8.0e-262 906.7 521 81.8
Ciclev10008006m.g Citrus clementina HOM05D003954 ORTHO05D004627 2.2e-256 888.6 521 80.6
Thecc.09G100700 Theobroma cacao HOM05D003954 ORTHO05D004627 2.2e-256 888.6 521 79.7
Cfa003181 Carpinus fangiana HOM05D003954 ORTHO05D004627 3.8e-256 887.9 521 80.4
TWI34G0439 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 3.8e-256 887.9 521 80.0
CiPaw.04G158000 Carya illinoinensis HOM05D003954 ORTHO05D004627 5.5e-255 884.0 521 79.7
Manes.16G108600 Manihot esculenta HOM05D003954 ORTHO05D004627 7.2e-255 883.6 519 79.8
RcHm_v2.0_Chr2g0091861 Rosa chinensis HOM05D003954 ORTHO05D004627 7.2e-255 883.6 518 80.5
Manes.03G027300 Manihot esculenta HOM05D003954 ORTHO05D004627 1.6e-254 882.5 519 79.6
Lj4g0018527 Lotus japonicus HOM05D003954 ORTHO05D004627 2.1e-254 882.1 517 79.7
Duzib168G1367 Durio zibethinus HOM05D003954 ORTHO05D004627 4.0e-253 877.9 521 79.1
CiPaw.03G225300 Carya illinoinensis HOM05D003954 ORTHO05D004627 8.8e-253 876.7 521 78.1
Glyma.08G033600 Glycine max HOM05D003954 ORTHO05D004627 1.7e-251 872.5 519 79.0
FAN28G0221 Fragaria x ananassa HOM05D003954 ORTHO05D004627 3.7e-251 871.3 529 78.1
FAN26G2983 Fragaria x ananassa HOM05D003954 ORTHO05D004627 4.8e-251 870.9 529 78.3
GSVIVG01015303001 Vitis vinifera HOM05D003954 ORTHO05D004627 8.2e-251 870.2 519 78.6
FAN26G2948 Fragaria x ananassa HOM05D003954 ORTHO05D004627 1.4e-250 869.4 529 78.1
QL02p041611 Quercus lobata HOM05D003954 ORTHO05D004627 1.4e-250 869.4 520 78.7
Gohir.D06G065800 Gossypium hirsutum HOM05D003954 ORTHO05D004627 3.1e-250 868.2 520 78.7
Gohir.A06G067200 Gossypium hirsutum HOM05D003954 ORTHO05D004627 4.1e-250 867.8 520 78.8
Phvul.002G308700 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 7.0e-250 867.1 519 79.0
MD02G1065600 Malus domestica HOM05D003954 ORTHO05D004627 1.6e-249 865.9 521 78.9
Actinidia09446 Actinidia chinensis HOM05D003954 ORTHO05D004627 2.7e-249 865.1 521 78.1
FAN19G1313 Fragaria x ananassa HOM05D003954 ORTHO05D004627 2.7e-249 865.1 529 77.7
Glyma.05G226800 Glycine max HOM05D003954 ORTHO05D004627 2.7e-249 865.1 521 77.9
CANSAT56G2004 Cannabis sativa HOM05D003954 ORTHO05D004627 4.5e-249 864.4 545 75.2
Eucgr.C03729 Eucalyptus grandis HOM05D003954 ORTHO05D004627 5.9e-249 864.0 521 77.5
VMungo0251G2014 Vigna mungo HOM05D003954 ORTHO05D004627 5.9e-249 864.0 519 78.6
Gorai.009G027500 Gossypium raimondii HOM05D003954 ORTHO05D004627 7.7e-249 863.6 521 77.9
Ca_17364_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 1.3e-248 862.8 517 77.9
Gohir.A05G025900 Gossypium hirsutum HOM05D003954 ORTHO05D004627 2.2e-248 862.1 521 77.7
Medtr8g102500 Medicago truncatula HOM05D003954 ORTHO05D004627 2.2e-248 862.1 519 77.3
MD15G1196500 Malus domestica HOM05D003954 ORTHO05D004627 2.9e-248 861.7 522 78.4
Potri.018G087700 Populus trichocarpa HOM05D003954 ORTHO05D004627 9.4e-247 856.7 517 78.5
Sabra18G0076000 Salix brachista HOM05D003954 ORTHO05D004627 2.1e-246 855.5 514 78.6
CSS0001350 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 4.7e-246 854.4 521 77.5
Gorai.010G077100 Gossypium raimondii HOM05D003954 ORTHO05D004627 8.0e-246 853.6 545 74.9
Actinidia39784 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.4e-245 852.8 521 77.5
Gohir.D05G027400 Gossypium hirsutum HOM05D003954 ORTHO05D004627 1.4e-245 852.8 531 76.3
Potri.006G164864 Populus trichocarpa HOM05D003954 ORTHO05D004627 6.8e-245 850.5 520 78.1
Hma1.2p1_0571F.1_g180650 Hydrangea macrophylla HOM05D003954 ORTHO05D004627 8.8e-245 850.1 521 77.4
Hund09103 Selenicereus undatus HOM05D003954 ORTHO05D004627 8.8e-245 850.1 521 76.4
CsaV3_1G039780 Cucumis sativus L. HOM05D003954 ORTHO05D004627 2.6e-244 848.6 522 76.8
Sed0027745 Sechium edule HOM05D003954 ORTHO05D004627 3.4e-244 848.2 522 77.4
EL10Ac8g18378 Beta vulgaris HOM05D003954 ORTHO05D004627 5.7e-244 847.4 521 76.0
Peaxi162Scf00665g00340 Petunia axillaris HOM05D003954 ORTHO05D004627 5.7e-244 847.4 521 77.2
Oeu064178.1 Olea europaea HOM05D003954 ORTHO05D004627 3.7e-243 844.7 521 76.2
SGA_v2.0_scaffold62G21557 Striga asiatica HOM05D003954 ORTHO05D004627 4.8e-243 844.3 521 76.0
TAR624G0841 Trochodendron aralioides HOM05D003954 ORTHO05D004627 1.8e-242 842.4 519 76.3
Sc08g0008010 Simmondsia chinensis HOM05D003954 ORTHO05D004627 3.1e-242 841.6 521 75.4
Nitab4.5_0005668g0030 Nicotiana tabacum HOM05D003954 ORTHO05D004627 7.0e-242 840.5 521 76.6
Actinidia07454 Actinidia chinensis HOM05D003954 ORTHO05D004627 3.5e-241 838.2 555 73.7
Lalb_Chr05g0223231 Lupinus albus HOM05D003954 ORTHO05D004627 3.5e-241 838.2 522 75.1
Migut.K00540 Erythranthe guttata HOM05D003954 ORTHO05D004627 3.8e-240 834.7 521 75.2
MBI01_g10128_MAGBIO Magnolia biondii HOM05D003954 ORTHO05D004627 1.5e-239 832.8 527 75.0
vmacro06252 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 1.5e-239 832.8 521 75.4
PGSC0003DMG400000296 Solanum tuberosum HOM05D003954 ORTHO05D004627 7.2e-239 830.5 521 75.2
CAN.G1241.30 Capsicum annuum HOM05D003954 ORTHO05D004627 9.5e-239 830.1 522 75.7
Lalb_Chr09g0331531 Lupinus albus HOM05D003954 ORTHO05D004627 1.6e-238 829.3 522 74.1
Nitab4.5_0000566g0060 Nicotiana tabacum HOM05D003954 ORTHO05D004627 2.8e-238 828.6 519 75.5
Cc06_g10470 Coffea canephora HOM05D003954 ORTHO05D004627 6.1e-238 827.4 518 76.3
Migut.J01101 Erythranthe guttata HOM05D003954 ORTHO05D004627 1.4e-237 826.2 521 76.0
arahy.Tifrunner.gnm1.ann1.UV3YSF Arachis hypogaea HOM05D003954 ORTHO05D004627 1.8e-237 825.9 517 74.9
Aqoxy7G01403 Aquilegia oxysepala HOM05D003954 ORTHO05D004627 3.0e-237 825.1 515 74.4
Duzib187G1161 Durio zibethinus HOM05D003954 ORTHO05D004627 5.2e-237 824.3 521 74.9
Psat1g047360 Pisum sativum HOM05D003954 ORTHO05D004627 6.8e-237 823.9 520 74.2
Sopen12g003440 Solanum pennellii HOM05D003954 ORTHO05D004627 6.8e-237 823.9 521 74.5
Solyc12g008490.2 Solanum lycopersicum HOM05D003954 ORTHO05D004627 8.9e-237 823.5 521 74.5
PSO210G6242 Papaver somniferum HOM05D003954 ORTHO05D004627 1.7e-235 819.3 523 75.0
MSTRG.19554 Avicennia marina HOM05D003954 ORTHO05D004627 3.7e-235 818.1 518 75.3
ECA240G1631 Erigeron canadensis HOM05D003954 ORTHO05D004627 1.4e-234 816.2 518 73.7
Psat7g016920 Pisum sativum HOM05D003954 ORTHO05D004627 1.8e-234 815.8 493 77.3
FAN23G0884 Fragaria x ananassa HOM05D003954 ORTHO05D004627 3.1e-234 815.1 521 74.7
PSO210G3120 Papaver somniferum HOM05D003954 ORTHO05D004627 5.4e-234 814.3 523 74.8
Atru.chr7.1463 Acer truncatum HOM05D003954 ORTHO05D004627 1.6e-233 812.8 467 81.8
HanXRQChr11g0321631 Helianthus annuus HOM05D003954 ORTHO05D004627 1.7e-232 809.3 521 73.5
TWI32G1148 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 2.9e-232 808.5 521 74.9
Lalb_Chr24g0397311 Lupinus albus HOM05D003954 ORTHO05D004627 1.1e-231 806.6 525 73.1
PGR102G1739 Punica granatum HOM05D003954 ORTHO05D004627 1.9e-231 805.8 521 74.1
Glyma.01G007900 Glycine max HOM05D003954 ORTHO05D004627 5.6e-231 804.3 520 72.5
Lj2g0001823 Lotus japonicus HOM05D003954 ORTHO05D004627 9.5e-231 803.5 521 73.9
Glyma.16G078400 Glycine max HOM05D003954 ORTHO05D004627 1.0e-229 800.0 522 72.2
Medtr6g088695 Medicago truncatula HOM05D003954 ORTHO05D004627 1.8e-229 799.3 520 71.5
HanXRQChr09g0238881 Helianthus annuus HOM05D003954 ORTHO05D004627 6.8e-229 797.3 521 72.4
Sc18g0001490 Simmondsia chinensis HOM05D003954 ORTHO05D004627 8.9e-229 797.0 509 74.9
Prupe.7G219900 Prunus persica HOM05D003954 ORTHO05D004627 2.2e-227 792.3 465 80.2
MELO3C015411.2 Cucumis melo HOM05D003954 ORTHO05D004627 3.7e-227 791.6 478 77.2
SGA_v2.0_scaffold19G08753 Striga asiatica HOM05D003954 ORTHO05D004627 6.4e-227 790.8 531 71.2
PSO832G3271 Papaver somniferum HOM05D003954 ORTHO05D004627 1.9e-226 789.3 505 75.2
Sed0021958 Sechium edule HOM05D003954 ORTHO05D004627 3.2e-226 788.5 468 79.1
Phvul.004G176200 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 4.1e-226 788.1 520 71.3
Rhsim05G0040200 Rhododendron simsii HOM05D003954 ORTHO05D004627 9.2e-226 786.9 519 73.4
PSO063G1218 Papaver somniferum HOM05D003954 ORTHO05D004627 1.2e-225 786.6 505 74.7
Dinv36687 Davidia involucrata HOM05D003954 ORTHO05D004627 3.5e-225 785.0 467 79.9
arahy.Tifrunner.gnm1.ann1.LVXR97 Arachis hypogaea HOM05D003954 ORTHO05D004627 2.3e-224 782.3 491 74.7
SalBow6G3745 Salvia bowleyana HOM05D003954 ORTHO05D004627 5.0e-224 781.2 516 72.3
unitig_578.g15920 Utricularia gibba HOM05D003954 ORTHO05D004627 1.5e-223 779.6 550 69.5
HPP92_001552 Vanilla planifolia HOM05D003954 ORTHO05D004627 5.6e-223 777.7 517 71.0
TAR633G1204 Trochodendron aralioides HOM05D003954 ORTHO05D004627 1.1e-221 773.5 471 77.1
Lalb_Chr22g0352551 Lupinus albus HOM05D003954 ORTHO05D004627 3.1e-221 771.9 554 68.4
Nn8g39063 Nelumbo nucifera HOM05D003954 ORTHO05D004627 4.0e-221 771.5 470 77.0
Rhsim03G0236700 Rhododendron simsii HOM05D003954 ORTHO05D004627 4.0e-221 771.5 521 71.6
ATR0681G291 Amborella trichopoda HOM05D003954 ORTHO05D004627 1.4e-218 763.1 520 70.4
COL.COLO4_34744 Corchorus olitorius HOM05D003954 ORTHO05D004627 2.7e-217 758.8 562 68.3
CDE04G2595 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 3.0e-216 755.4 519 70.1
AUR62021404 Chenopodium quinoa HOM05D003954 ORTHO05D004627 8.6e-216 753.8 521 69.5
AUR62010893 Chenopodium quinoa HOM05D003954 ORTHO05D004627 3.3e-215 751.9 521 69.3
arahy.Tifrunner.gnm1.ann1.KIU7DS Arachis hypogaea HOM05D003954 ORTHO05D004627 6.2e-214 747.7 521 69.1
vmacro10852 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 1.4e-213 746.5 574 64.5
arahy.Tifrunner.gnm1.ann1.1X3G68 Arachis hypogaea HOM05D003954 ORTHO05D004627 1.2e-212 743.4 521 68.7
CDE07G1077 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 1.3e-211 740.0 521 69.1
CSS0033107 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 3.2e-210 735.3 524 68.7
Lsat_1_v5_gn_7_39841 Lactuca sativa HOM05D003954 ORTHO05D004627 4.1e-210 734.9 521 68.9
TPR.G21381 Trifolium pratense HOM05D003954 ORTHO05D004627 1.7e-203 713.0 541 64.3
VMungo0464G1304 Vigna mungo HOM05D003954 ORTHO05D004627 1.5e-196 689.9 520 65.2
Ah.14g083230 Amaranthus hybridus HOM05D003954 ORTHO05D004627 4.6e-193 678.3 521 63.7
Lj7A665G29 Lonicera japonica HOM05D003954 ORTHO05D004627 1.1e-189 667.2 497 68.6
FvH4_1g06110 Fragaria vesca HOM05D003954 ORTHO05D004627 1.7e-187 659.8 383 80.2
Dinv41667 Davidia involucrata HOM05D003954 ORTHO05D004627 1.0e-184 650.6 381 79.5
TPR.G23479 Trifolium pratense HOM05D003954 ORTHO05D004627 1.4e-181 640.2 383 78.1
Lsat_1_v5_gn_5_144920 Lactuca sativa HOM05D003954 ORTHO05D004627 3.8e-179 632.1 481 63.6
SHI02691 Sapria himalayana HOM05D003954 ORTHO05D004627 1.2e-177 627.1 562 58.0
Medtr8g102490 Medicago truncatula HOM05D003954 ORTHO05D004627 2.3e-176 622.9 481 64.4
AagrBONN_evm.TU.Sc2ySwM_228.2751 Anthoceros agrestis HOM05D003954 ORTHO05D004627 5.3e-173 611.7 487 59.1
SMO367G0175 Selaginella moellendorffii HOM05D003954 ORTHO05D004627 1.3e-166 590.5 447 62.2
A09p12640 Brassica napus HOM05D003954 ORTHO05D004627 4.8e-166 588.6 293 96.2
Pp3c16_7990 Physcomitrium patens HOM05D003954 ORTHO05D004627 1.5e-156 557.0 473 56.7
Mapoly0082s0037 Marchantia polymorpha HOM05D003954 ORTHO05D004627 3.6e-153 545.8 522 53.3
DCAR_028664 Daucus carota HOM05D003954 ORTHO05D004627 1.7e-139 500.4 353 68.3
Zm00001eb365210 Zea mays HOM05D003954 ORTHO05D004627 1.3e-131 474.2 286 76.9
Ca_25572_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 5.7e-127 458.8 292 74.0
CAN.G3537.1 Capsicum annuum HOM05D003954 ORTHO05D004627 1.5e-122 444.1 290 74.1
TAR626G0478 Trochodendron aralioides HOM05D003954 ORTHO05D004627 2.5e-122 443.4 266 75.6
Lj4C389T2 Lonicera japonica HOM05D003954 ORTHO05D004627 3.6e-121 439.5 289 74.0
SEGI_27682 Sequoiadendron giganteum HOM05D003954 ORTHO05D004627 3.0e-107 393.3 246 73.2
ClCG03G016150 Citrullus lanatus HOM05D003954 ORTHO05D004627 1.2e-97 361.3 245 72.2
Actinidia17525 Actinidia chinensis HOM05D003954 ORTHO05D004627 4.9e-78 296.2 204 69.1
PRCOL_00001038 Prasinoderma coloniale HOM05D003954 ORTHO05D004627 1.4e-56 224.9 469 32.0
TPR.G23455 Trifolium pratense HOM05D003954 ORTHO05D004627 5.3e-56 223.0 132 76.5
MCO02G294 Micromonas commoda HOM05D003954 ORTHO05D004627 2.6e-55 220.7 467 31.5
SEGI_30237 Sequoiadendron giganteum HOM05D003954 ORTHO05D004627 5.9e-39 166.4 152 51.3
Actinidia32652 Actinidia chinensis HOM05D003954 ORTHO05D004627 5.0e-38 163.3 205 47.8
Oeu053184.3 Olea europaea HOM05D000113 ORTHO05D010194 9.7e-34 149.1 109 64.2
Os01g0906000 Oryza sativa ssp. japonica HOM05D003954 ORTHO05D004627 3.0e-27 127.5 86 70.9
Zm00001eb132850 Zea mays HOM05D003954 ORTHO05D004627 4.2e-21 107.1 58 81.0
Actinidia34604 Actinidia chinensis HOM05D003954 ORTHO05D004627 3.6e-20 104.0 141 46.8
MD01G1180200 Malus domestica HOM05D003954 ORTHO05D004627 6.8e-19 99.8 60 75.0
Cre09.g409250 Chlamydomonas reinhardtii HOM05D003954 ORTHO05D004627 5.7e-18 96.7 156 35.9
Actinidia32651 Actinidia chinensis HOM05D003954 ORTHO05D004627 4.2e-13 80.5 165 37.0
TPR.G21382 Trifolium pratense HOM05D003954 ORTHO05D004627 5.4e-08 63.5 55 61.8
CAN.G195.50 Capsicum annuum HOM05D003954 ORTHO05D004627 5.9e-07 60.1 66 48.5
MBI06_g23363_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 7.7e-07 59.7 37 75.7


User provided reference genes

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