Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p59020 Brassica napus HOM05D003644 ORTHO05D004305 1.5e-98 362.8 184 100.0
BraA09t41288Z Brassica rapa HOM05D003644 ORTHO05D004305 1.5e-98 362.8 184 100.0
C08p42300 Brassica napus HOM05D003644 ORTHO05D004305 7.0e-96 354.0 184 97.8
BolC8t51790H Brassica oleracea HOM05D003644 ORTHO05D004305 7.0e-96 354.0 184 97.8
BcaC07g41224 Brassica carinata HOM05D003644 ORTHO05D004305 1.6e-95 352.8 184 97.8
BcaB08g34898 Brassica carinata HOM05D003644 ORTHO05D004305 3.4e-82 308.5 184 86.4
Thhalv10002311m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 5.8e-82 307.8 190 84.7
Sp3g33380 Schrenkiella parvula HOM05D003644 ORTHO05D004305 3.2e-80 302.0 194 84.5
BcaC07g41225 Brassica carinata HOM05D003644 ORTHO05D004305 2.7e-79 298.9 184 85.3
AL3G48010 Arabidopsis lyrata HOM05D003644 ORTHO05D004305 5.2e-75 284.6 187 80.7
CARHR110580 Cardamine hirsuta HOM05D003644 ORTHO05D004305 3.5e-71 271.9 187 76.5
BcaNung04091 Brassica carinata HOM05D003644 ORTHO05D004305 8.6e-70 267.3 187 75.9
A09p12690 Brassica napus HOM05D003644 ORTHO05D004305 4.9e-65 251.5 190 72.1
C09p15050 Brassica napus HOM05D003644 ORTHO05D004305 1.6e-63 246.5 167 77.8
BcaC04g22808 Brassica carinata HOM05D003644 ORTHO05D004305 3.6e-60 235.3 171 74.9
BolC9t54408H Brassica oleracea HOM05D003644 ORTHO05D004305 3.6e-60 235.3 171 74.9
Carub.0003s3436 Capsella rubella HOM05D003644 ORTHO05D004305 8.1e-60 234.2 165 74.5
Aa31LG8G17030 Aethionema arabicum HOM05D003644 ORTHO05D004305 3.4e-58 228.8 143 81.1
BolC7t40541H Brassica oleracea HOM05D003644 ORTHO05D004305 3.9e-54 215.3 194 67.0
AT2G20080 Arabidopsis thaliana HOM05D003644 ORTHO05D004305 4.3e-53 211.8 188 65.4
Carub.0007s1180 Capsella rubella HOM05D003644 ORTHO05D004305 1.3e-52 210.3 205 60.5
THA.LOC104814562 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 1.6e-52 209.9 209 59.3
AT4G28840 Arabidopsis thaliana HOM05D003644 ORTHO05D004305 4.5e-50 201.8 199 60.3
C07p01040 Brassica napus HOM05D003644 ORTHO05D004305 7.9e-47 191.0 192 62.5
BolC7t46126H Brassica oleracea HOM05D003644 ORTHO05D004305 2.5e-45 186.0 202 57.4
BcaC06g32601 Brassica carinata HOM05D003644 ORTHO05D004305 4.3e-45 185.3 202 56.9
A03p58450 Brassica napus HOM05D003644 ORTHO05D004305 7.4e-45 184.5 202 56.9
C07p56470 Brassica napus HOM05D003644 ORTHO05D004305 1.3e-44 183.7 202 56.9
BraA09t36915Z Brassica rapa HOM05D003644 ORTHO05D004305 2.1e-44 183.0 187 57.8
A07p00580 Brassica napus HOM05D003644 ORTHO05D004305 1.1e-43 180.6 190 61.6
BcaB03g16807 Brassica carinata HOM05D003644 ORTHO05D004305 5.8e-42 174.9 188 59.6
C01p10620 Brassica napus HOM05D003644 ORTHO05D004305 2.2e-41 172.9 203 56.2
BraA01t00855Z Brassica rapa HOM05D003644 ORTHO05D004305 2.2e-41 172.9 203 56.2
Sp7g26840 Schrenkiella parvula HOM05D003644 ORTHO05D004305 2.9e-41 172.6 165 61.8
BolC1t01024H Brassica oleracea HOM05D003644 ORTHO05D004305 1.1e-40 170.6 203 55.7
A01p09070 Brassica napus HOM05D003644 ORTHO05D004305 1.4e-40 170.2 203 55.7
BcaNung01359 Brassica carinata HOM05D003644 ORTHO05D004305 3.5e-39 165.6 191 58.6
THA.LOC104804017 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 6.7e-38 161.4 200 53.5
BcaC09g51666 Brassica carinata HOM05D003644 ORTHO05D004305 1.5e-37 160.2 185 55.1
BcaC06g36690 Brassica carinata HOM05D003644 ORTHO05D004305 3.3e-37 159.1 116 78.4
Duzib187G1156 Durio zibethinus HOM05D003644 ORTHO05D004305 1.6e-36 156.8 209 50.7
Thecc.09G105500 Theobroma cacao HOM05D003644 ORTHO05D004305 8.2e-36 154.5 209 49.8
Duzib150G1566 Durio zibethinus HOM05D003644 ORTHO05D004305 3.1e-35 152.5 209 49.8
Aa31LG2G21540 Aethionema arabicum HOM05D003644 ORTHO05D004305 6.9e-35 151.4 176 54.0
Ciclev10010512m.g Citrus clementina HOM05D003644 ORTHO05D004305 6.9e-35 151.4 211 46.9
BraA07t27854Z Brassica rapa HOM05D003644 ORTHO05D004305 9.0e-35 151.0 178 57.3
Thhalv10026355m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 9.0e-35 151.0 184 54.3
GSVIVG01015346001 Vitis vinifera HOM05D003644 ORTHO05D004305 1.2e-34 150.6 209 48.8
Manes.16G112500 Manihot esculenta HOM05D003644 ORTHO05D004305 2.9e-33 146.0 207 48.3
Duzib168G0231 Durio zibethinus HOM05D003644 ORTHO05D004305 8.4e-33 144.4 209 48.8
Cpa.g.sc23.57 Carica papaya HOM05D003644 ORTHO05D004305 1.1e-32 144.1 206 46.1
Potri.018G084100 Populus trichocarpa HOM05D003644 ORTHO05D004305 2.1e-31 139.8 210 45.7
Gorai.010G073900 Gossypium raimondii HOM05D003644 ORTHO05D004305 7.9e-31 137.9 201 49.8
CSS0010496 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 3.0e-30 136.0 207 43.5
CSS0033414 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 3.0e-30 136.0 207 43.5
Manes.03G024200 Manihot esculenta HOM05D003644 ORTHO05D004305 3.0e-30 136.0 212 47.2
AL7G23640 Arabidopsis lyrata HOM05D003644 ORTHO05D004305 8.7e-30 134.4 116 64.7
QL02p044635 Quercus lobata HOM05D003644 ORTHO05D004305 1.9e-29 133.3 210 45.2
TAR624G1421 Trochodendron aralioides HOM05D003644 ORTHO05D004305 1.9e-29 133.3 202 48.0
VMungo0251G1747 Vigna mungo HOM05D003644 ORTHO05D004305 1.9e-29 133.3 207 45.4
CiPaw.03G227900 Carya illinoinensis HOM05D003644 ORTHO05D004305 9.7e-29 131.0 212 47.6
Gohir.D06G063400 Gossypium hirsutum HOM05D003644 ORTHO05D004305 2.8e-28 129.4 198 48.5
Glyma.05G229100 Glycine max HOM05D003644 ORTHO05D004305 3.7e-28 129.0 201 46.3
Phvul.002G311400 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 4.8e-28 128.6 206 42.7
CANSAT56G0200 Cannabis sativa HOM05D003644 ORTHO05D004305 1.8e-27 126.7 225 43.1
MBI04_g14930_MAGBIO Magnolia biondii HOM05D003644 ORTHO05D004305 2.4e-27 126.3 209 43.5
MD02G1057600 Malus domestica HOM05D003644 ORTHO05D004305 3.1e-27 125.9 214 43.0
TWI34G1832 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 6.9e-27 124.8 218 43.6
Haze_25785 Corylus avellana HOM05D003644 ORTHO05D004305 1.2e-26 124.0 209 45.0
Glyma.08G036100 Glycine max HOM05D003644 ORTHO05D004305 2.0e-26 123.2 204 45.1
Sabra18G0072500 Salix brachista HOM05D003644 ORTHO05D004305 2.0e-26 123.2 234 41.9
CSS0008241 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 4.5e-26 122.1 210 43.3
Glyma.09G193400 Glycine max HOM05D003644 ORTHO05D004305 4.5e-26 122.1 195 45.1
TWI32G0193 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 5.9e-26 121.7 208 46.2
MSTRG.6013 Avicennia marina HOM05D003644 ORTHO05D004305 1.0e-25 120.9 209 44.0
PGR142G1369 Punica granatum HOM05D003644 ORTHO05D004305 1.0e-25 120.9 218 40.8
Potri.006G161100 Populus trichocarpa HOM05D003644 ORTHO05D004305 1.7e-25 120.2 212 41.5
Nn2g11654 Nelumbo nucifera HOM05D003644 ORTHO05D004305 2.2e-25 119.8 213 41.3
TAR636G2793 Trochodendron aralioides HOM05D003644 ORTHO05D004305 3.8e-25 119.0 208 43.3
Peaxi162Scf00665g00003 Petunia axillaris HOM05D003644 ORTHO05D004305 2.5e-24 116.3 210 45.2
SalBow6G0047 Salvia bowleyana HOM05D003644 ORTHO05D004305 2.5e-24 116.3 204 41.2
Oeu015581.1 Olea europaea HOM05D003644 ORTHO05D004305 3.2e-24 115.9 203 42.4
Nn3g18137 Nelumbo nucifera HOM05D003644 ORTHO05D004305 4.2e-24 115.5 211 44.1
ClCG06G008860 Citrullus lanatus HOM05D003644 ORTHO05D004305 5.5e-24 115.2 202 44.1
FAN26G3023 Fragaria x ananassa HOM05D003644 ORTHO05D004305 5.5e-24 115.2 212 42.0
FvH4_1g05660 Fragaria vesca HOM05D003644 ORTHO05D004305 7.2e-24 114.8 213 41.3
FAN26G0903 Fragaria x ananassa HOM05D003644 ORTHO05D004305 7.2e-24 114.8 212 41.5
DCAR_012057 Daucus carota HOM05D003644 ORTHO05D004305 9.4e-24 114.4 214 40.7
FAN19G0617 Fragaria x ananassa HOM05D003644 ORTHO05D004305 9.4e-24 114.4 213 41.3
Psat1g044920 Pisum sativum HOM05D003644 ORTHO05D004305 9.4e-24 114.4 200 45.0
Sed0019018 Sechium edule HOM05D003644 ORTHO05D004305 1.6e-23 113.6 204 44.1
Gohir.A06G064800 Gossypium hirsutum HOM05D003644 ORTHO05D004305 2.1e-23 113.2 201 44.8
Prupe.7G225200 Prunus persica HOM05D003644 ORTHO05D004305 2.1e-23 113.2 215 40.5
CsaV3_2G002110 Cucumis sativus L. HOM05D003644 ORTHO05D004305 3.6e-23 112.5 216 41.7
MELO3C004570.2 Cucumis melo HOM05D003644 ORTHO05D004305 4.6e-23 112.1 173 45.7
FAN28G1311 Fragaria x ananassa HOM05D003644 ORTHO05D004305 4.6e-23 112.1 223 38.6
Medtr6g088280 Medicago truncatula HOM05D003644 ORTHO05D004305 2.3e-22 109.8 200 43.5
Aqoxy7G01525 Aquilegia oxysepala HOM05D003644 ORTHO05D004305 3.9e-22 109.0 179 41.3
CsaV3_1G021830 Cucumis sativus L. HOM05D003644 ORTHO05D004305 5.1e-22 108.6 205 42.9
AUR62010940 Chenopodium quinoa HOM05D003644 ORTHO05D004305 1.1e-21 107.5 207 40.6
MELO3C024703.2 Cucumis melo HOM05D003644 ORTHO05D004305 1.1e-21 107.5 205 42.0
Gorai.001G007300 Gossypium raimondii HOM05D003644 ORTHO05D004305 1.1e-21 107.5 208 40.9
TPR.G34913 Trifolium pratense HOM05D003644 ORTHO05D004305 1.1e-21 107.5 210 42.4
Atru.chr7.1390 Acer truncatum HOM05D003644 ORTHO05D004305 2.0e-21 106.7 218 39.0
arahy.Tifrunner.gnm1.ann1.TDG8V6 Arachis hypogaea HOM05D003644 ORTHO05D004305 2.5e-21 106.3 216 42.6
Gohir.D05G026700 Gossypium hirsutum HOM05D003644 ORTHO05D004305 4.3e-21 105.5 211 41.2
Gohir.A07G004600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 7.4e-21 104.8 175 43.4
Lj2g0017641 Lotus japonicus HOM05D003644 ORTHO05D004305 7.4e-21 104.8 202 42.6
BcaB03g16801 Brassica carinata HOM05D003644 ORTHO05D004305 9.7e-21 104.4 71 81.7
Gohir.A05G025200 Gossypium hirsutum HOM05D003644 ORTHO05D004305 9.7e-21 104.4 211 41.7
ClCG11G002330 Citrullus lanatus HOM05D003644 ORTHO05D004305 1.3e-20 104.0 209 38.8
Phvul.004G168350 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 1.3e-20 104.0 197 42.6
ECA234G2378 Erigeron canadensis HOM05D003644 ORTHO05D004305 2.2e-20 103.2 187 41.2
FAN23G2152 Fragaria x ananassa HOM05D003644 ORTHO05D004305 2.2e-20 103.2 223 37.2
Gorai.009G026800 Gossypium raimondii HOM05D003644 ORTHO05D004305 2.8e-20 102.8 219 39.7
MD15G1192000 Malus domestica HOM05D003644 ORTHO05D004305 6.3e-20 101.7 214 38.3
Sed0013314 Sechium edule HOM05D003644 ORTHO05D004305 6.3e-20 101.7 197 40.1
Gohir.D07G007600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 1.8e-19 100.1 204 41.2
VMungo0464G0020 Vigna mungo HOM05D003644 ORTHO05D004305 2.4e-19 99.8 202 41.6
PGSC0003DMG400000374 Solanum tuberosum HOM05D003644 ORTHO05D004305 6.9e-19 98.2 209 42.1
Hma1.2p1_0945F.1_g240090 Hydrangea macrophylla HOM05D003644 ORTHO05D004305 9.1e-19 97.8 192 41.1
COL.COLO4_34805 Corchorus olitorius HOM05D003644 ORTHO05D004305 1.2e-18 97.4 192 41.1
Sopen12g003210 Solanum pennellii HOM05D003644 ORTHO05D004305 2.6e-18 96.3 209 42.1
PGSC0003DMG400003139 Solanum tuberosum HOM05D003644 ORTHO05D004305 2.6e-18 96.3 203 40.4
Peaxi162Scf00231g00061 Petunia axillaris HOM05D003644 ORTHO05D004305 5.9e-18 95.1 205 40.5
CAN.G1774.6 Capsicum annuum HOM05D003644 ORTHO05D004305 1.3e-17 94.0 173 44.5
Hund09225 Selenicereus undatus HOM05D003644 ORTHO05D004305 1.3e-17 94.0 212 39.2
Lalb_Chr16g0388081 Lupinus albus HOM05D003644 ORTHO05D004305 1.7e-17 93.6 120 46.7
Dinv41640 Davidia involucrata HOM05D003644 ORTHO05D004305 2.2e-17 93.2 168 41.7
Glyma.01G145600 Glycine max HOM05D003644 ORTHO05D004305 2.2e-17 93.2 198 38.9
Sed0028016 Sechium edule HOM05D003644 ORTHO05D004305 6.5e-17 91.7 212 39.6
Sopen07g007520 Solanum pennellii HOM05D003644 ORTHO05D004305 1.4e-16 90.5 201 37.3
Hund09226 Selenicereus undatus HOM05D003644 ORTHO05D004305 1.9e-16 90.1 193 38.9
arahy.Tifrunner.gnm1.ann1.XM0XDL Arachis hypogaea HOM05D003644 ORTHO05D004305 7.2e-16 88.2 216 36.1
Hund26238 Selenicereus undatus HOM05D003644 ORTHO05D004305 7.2e-16 88.2 202 38.1
DCAR_010477 Daucus carota HOM05D003644 ORTHO05D004305 6.1e-15 85.1 169 38.5
Lalb_Chr22g0352641 Lupinus albus HOM05D003644 ORTHO05D004305 7.9e-15 84.7 215 37.2
Migut.K00491 Erythranthe guttata HOM05D003644 ORTHO05D004305 2.3e-14 83.2 167 38.3
Oeu002262.2 Olea europaea HOM05D003644 ORTHO05D004305 2.3e-14 83.2 140 47.1
arahy.Tifrunner.gnm1.ann1.X7P2RE Arachis hypogaea HOM05D003644 ORTHO05D004305 3.0e-14 82.8 147 40.8
RcHm_v2.0_Chr2g0091291 Rosa chinensis HOM05D003644 ORTHO05D004305 3.0e-14 82.8 165 37.6
HanXRQChr12g0358181 Helianthus annuus HOM05D003644 ORTHO05D004305 3.9e-14 82.4 166 37.3
PSO566G0277 Papaver somniferum HOM05D003644 ORTHO05D004305 3.9e-14 82.4 211 35.5
Cc06_g10070 Coffea canephora HOM05D003644 ORTHO05D004305 6.7e-14 81.6 211 36.5
HanXRQChr14g0449921 Helianthus annuus HOM05D003644 ORTHO05D004305 8.8e-14 81.3 165 38.2
MSTRG.19571 Avicennia marina HOM05D003644 ORTHO05D004305 1.5e-13 80.5 208 33.7
PSO782G2161 Papaver somniferum HOM05D003644 ORTHO05D004305 2.0e-13 80.1 211 35.5
COL.COLO4_17464 Corchorus olitorius HOM05D003644 ORTHO05D004305 5.7e-13 78.6 107 44.9
Lsat_1_v5_gn_8_96040 Lactuca sativa HOM05D003644 ORTHO05D004305 7.4e-13 78.2 143 42.0
EL10Ac8g18428 Beta vulgaris HOM05D003644 ORTHO05D004305 2.2e-12 76.6 206 35.4
Actinidia09436 Actinidia chinensis HOM05D003644 ORTHO05D004305 3.7e-12 75.9 197 36.0
Lalb_Chr05g0223051 Lupinus albus HOM05D003644 ORTHO05D004305 4.8e-12 75.5 130 40.8
Sc18g0001380 Simmondsia chinensis HOM05D003644 ORTHO05D004305 4.8e-12 75.5 200 37.5
Actinidia32668 Actinidia chinensis HOM05D003644 ORTHO05D004305 6.3e-12 75.1 129 41.1
Sc08g0007690 Simmondsia chinensis HOM05D003644 ORTHO05D004305 8.2e-12 74.7 190 37.4
CARHR236630 Cardamine hirsuta HOM05D003644 ORTHO05D004305 3.1e-11 72.8 68 60.3
Nitab4.5_0014820g0010 Nicotiana tabacum HOM05D003644 ORTHO05D004305 7.0e-11 71.6 153 40.5
Oeu018442.1 Olea europaea HOM05D003644 ORTHO05D004305 1.2e-10 70.9 84 53.6
TPR.G23503 Trifolium pratense HOM05D003644 ORTHO05D004305 4.5e-10 68.9 151 40.4
Eucgr.C01280 Eucalyptus grandis HOM05D003644 ORTHO05D004305 5.9e-10 68.6 203 33.0
PGR102G0050 Punica granatum HOM05D003644 ORTHO05D004305 7.7e-10 68.2 212 35.8
HPP92_019983 Vanilla planifolia HOM05D003644 ORTHO05D004305 1.0e-09 67.8 181 34.8
Actinidia20403 Actinidia chinensis HOM05D003644 ORTHO05D004305 2.2e-09 66.6 191 37.2
Lsat_1_v5_gn_5_147641 Lactuca sativa HOM05D003644 ORTHO05D004305 3.2e-08 62.8 94 42.6
arahy.Tifrunner.gnm1.ann1.R9ZCFD Arachis hypogaea HOM05D003644 ORTHO05D004305 9.4e-08 61.2 170 32.4
Zm00001eb156860 Zea mays HOM05D003644 ORTHO05D004305 9.4e-08 61.2 188 36.2
Ah.09g230900 Amaranthus hybridus HOM05D003644 ORTHO05D004305 1.6e-07 60.5 206 31.6
Solyc12g007240.3 Solanum lycopersicum HOM05D003644 ORTHO05D004305 2.7e-07 59.7 139 38.1
unitig_578.g15927 Utricularia gibba HOM05D003644 ORTHO05D004305 2.7e-07 59.7 86 44.2
Os01g0676900 Oryza sativa ssp. japonica HOM05D003644 ORTHO05D004305 2.3e-06 56.6 184 32.6
Zm00001eb343410 Zea mays HOM05D003644 ORTHO05D004305 5.2e-06 55.5 98 38.8
Rhsim05G0043500 Rhododendron simsii HOM05D003644 ORTHO05D004305 8.8e-06 54.7 214 30.8


User provided reference genes

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