Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p58650 Brassica napus HOM05D004655 ORTHO05D005567 1.5e-156 556.2 297 100.0
BraA09t41251Z Brassica rapa HOM05D004655 ORTHO05D005567 1.5e-156 556.2 297 100.0
C08p41940 Brassica napus HOM05D004655 ORTHO05D005567 1.9e-151 539.3 297 97.6
BcaC07g41186 Brassica carinata HOM05D004655 ORTHO05D005567 9.4e-151 537.0 297 97.0
BolC8t51757H Brassica oleracea HOM05D004655 ORTHO05D005567 9.4e-151 537.0 297 97.0
BcaB08g34948 Brassica carinata HOM05D004655 ORTHO05D005567 1.0e-141 506.9 299 93.0
Sp3g34160 Schrenkiella parvula HOM05D004655 ORTHO05D005567 9.2e-138 493.8 297 89.2
Thhalv10002049m.g Eutrema salsugineum HOM05D004655 ORTHO05D005567 5.2e-133 478.0 291 90.0
CARHR111640 Cardamine hirsuta HOM05D004655 ORTHO05D005567 3.9e-128 461.8 295 84.7
Aa31LG8G17800 Aethionema arabicum HOM05D004655 ORTHO05D005567 6.6e-128 461.1 296 83.1
AL3G54160 Arabidopsis lyrata HOM05D004655 ORTHO05D005567 1.1e-127 460.3 295 84.1
AT2G20890 Arabidopsis thaliana HOM05D004655 ORTHO05D005567 7.3e-127 457.6 296 84.5
Carub.0003s3556 Capsella rubella HOM05D004655 ORTHO05D005567 3.1e-125 452.2 297 84.8
THA.LOC104804073 Tarenaya hassleriana HOM05D004655 ORTHO05D005567 4.3e-119 431.8 289 79.2
MELO3C018772.2 Cucumis melo HOM05D004655 ORTHO05D005567 4.7e-110 401.7 291 74.9
Gohir.A04G106100 Gossypium hirsutum HOM05D004655 ORTHO05D005567 6.2e-110 401.4 297 72.1
Gorai.012G132100 Gossypium raimondii HOM05D004655 ORTHO05D005567 2.4e-109 399.4 297 72.1
Duzib132G0437 Durio zibethinus HOM05D004655 ORTHO05D005567 5.2e-109 398.3 293 74.1
Duzib132G0466 Durio zibethinus HOM05D004655 ORTHO05D005567 5.2e-109 398.3 293 74.1
Gohir.D04G146200 Gossypium hirsutum HOM05D004655 ORTHO05D005567 6.8e-109 397.9 297 71.7
Thecc.02G170400 Theobroma cacao HOM05D004655 ORTHO05D005567 2.6e-108 396.0 292 72.9
ClCG00G002920 Citrullus lanatus HOM05D004655 ORTHO05D005567 7.6e-108 394.4 291 74.2
ClCG02G001360 Citrullus lanatus HOM05D004655 ORTHO05D005567 7.6e-108 394.4 291 74.2
Sed0025834 Sechium edule HOM05D004655 ORTHO05D005567 1.3e-107 393.7 293 73.4
CsaV3_7G004070 Cucumis sativus L. HOM05D004655 ORTHO05D005567 2.9e-107 392.5 291 73.2
Migut.H01014 Erythranthe guttata HOM05D004655 ORTHO05D005567 2.9e-107 392.5 289 71.6
QL08p036998 Quercus lobata HOM05D004655 ORTHO05D005567 2.9e-107 392.5 290 72.4
Actinidia12466 Actinidia chinensis HOM05D004655 ORTHO05D005567 1.1e-106 390.6 292 73.6
Dinv13829 Davidia involucrata HOM05D004655 ORTHO05D005567 1.1e-106 390.6 292 72.6
AUR62037119 Chenopodium quinoa HOM05D004655 ORTHO05D005567 4.2e-106 388.7 291 73.2
MD09G1097200 Malus domestica HOM05D004655 ORTHO05D005567 4.2e-106 388.7 293 71.3
COL.COLO4_13659 Corchorus olitorius HOM05D004655 ORTHO05D005567 5.4e-106 388.3 293 71.0
Lsat_1_v5_gn_3_40720 Lactuca sativa HOM05D004655 ORTHO05D005567 7.1e-106 387.9 312 68.6
Manes.13G152400 Manihot esculenta HOM05D004655 ORTHO05D005567 1.2e-105 387.1 298 70.1
MD17G1085500 Malus domestica HOM05D004655 ORTHO05D005567 3.5e-105 385.6 297 70.4
RcHm_v2.0_Chr2g0161411 Rosa chinensis HOM05D004655 ORTHO05D005567 4.6e-105 385.2 289 72.0
Lalb_Chr01g0005451 Lupinus albus HOM05D004655 ORTHO05D005567 1.0e-104 384.0 293 70.6
FvH4_6g44420 Fragaria vesca HOM05D004655 ORTHO05D005567 1.7e-104 383.3 294 71.8
arahy.Tifrunner.gnm1.ann1.XZ54ZU Arachis hypogaea HOM05D004655 ORTHO05D005567 2.3e-104 382.9 298 71.8
EL10Ac9g20731 Beta vulgaris HOM05D004655 ORTHO05D005567 2.3e-104 382.9 288 72.6
CSS0017466 Camellia sinensis var. sinensis HOM05D004655 ORTHO05D005567 2.3e-104 382.9 291 71.8
Prupe.3G228700 Prunus persica HOM05D004655 ORTHO05D005567 2.3e-104 382.9 287 71.8
arahy.Tifrunner.gnm1.ann1.YR7HYJ Arachis hypogaea HOM05D004655 ORTHO05D005567 3.0e-104 382.5 298 71.5
FAN14G2207 Fragaria x ananassa HOM05D004655 ORTHO05D005567 3.0e-104 382.5 294 71.8
PGR042G1100 Punica granatum HOM05D004655 ORTHO05D005567 3.0e-104 382.5 293 69.6
VMungo1080G0396 Vigna mungo HOM05D004655 ORTHO05D005567 5.1e-104 381.7 293 71.0
MSTRG.14176 Avicennia marina HOM05D004655 ORTHO05D005567 6.6e-104 381.3 291 69.8
Glyma.12G200200 Glycine max HOM05D004655 ORTHO05D005567 6.6e-104 381.3 291 72.9
Actinidia18535 Actinidia chinensis HOM05D004655 ORTHO05D005567 1.1e-103 380.6 292 71.9
Ciclev10016098m.g Citrus clementina HOM05D004655 ORTHO05D005567 1.1e-103 380.6 293 70.6
Ca_01544_v3 Cicer arietinum L. HOM05D004655 ORTHO05D005567 1.5e-103 380.2 293 70.0
Glyma.13G302100 Glycine max HOM05D004655 ORTHO05D005567 3.3e-103 379.0 291 71.8
Phvul.005G108600 Phaseolus vulgaris HOM05D004655 ORTHO05D005567 3.3e-103 379.0 292 71.6
Lj3g0013026 Lotus japonicus HOM05D004655 ORTHO05D005567 4.3e-103 378.6 296 71.6
TWI36G0222 Tripterygium wilfordii HOM05D004655 ORTHO05D005567 4.3e-103 378.6 293 69.6
Potri.013G148400 Populus trichocarpa HOM05D004655 ORTHO05D005567 5.6e-103 378.3 294 71.8
GSVIVG01029990001 Vitis vinifera HOM05D004655 ORTHO05D005567 5.6e-103 378.3 234 81.6
Atru.chr6.3084 Acer truncatum HOM05D004655 ORTHO05D005567 7.3e-103 377.9 289 70.6
AUR62032763 Chenopodium quinoa HOM05D004655 ORTHO05D005567 7.3e-103 377.9 288 72.9
Lalb_Chr22g0356311 Lupinus albus HOM05D004655 ORTHO05D005567 9.6e-103 377.5 285 73.0
Nn1g03859 Nelumbo nucifera HOM05D004655 ORTHO05D005567 9.6e-103 377.5 292 68.8
TPR.G18073 Trifolium pratense HOM05D004655 ORTHO05D005567 1.6e-102 376.7 298 70.5
Eucgr.A01774 Eucalyptus grandis HOM05D004655 ORTHO05D005567 2.1e-102 376.3 301 69.4
FAN02G3511 Fragaria x ananassa HOM05D004655 ORTHO05D005567 2.1e-102 376.3 295 71.5
FAN05G4368 Fragaria x ananassa HOM05D004655 ORTHO05D005567 2.1e-102 376.3 295 71.5
Medtr4g045980 Medicago truncatula HOM05D004655 ORTHO05D005567 3.6e-102 375.6 293 71.0
Psat5g269080 Pisum sativum HOM05D004655 ORTHO05D005567 3.6e-102 375.6 273 74.0
FAN02G1121 Fragaria x ananassa HOM05D004655 ORTHO05D005567 4.7e-102 375.2 295 70.8
HanXRQChr06g0171121 Helianthus annuus HOM05D004655 ORTHO05D005567 4.7e-102 375.2 290 70.3
Sopen07g028730 Solanum pennellii HOM05D004655 ORTHO05D005567 1.4e-101 373.6 290 69.3
TWI75G0473 Tripterygium wilfordii HOM05D004655 ORTHO05D005567 1.8e-101 373.2 294 68.0
Ah.01g005210 Amaranthus hybridus HOM05D004655 ORTHO05D005567 2.4e-101 372.9 290 70.0
PGSC0003DMG400018330 Solanum tuberosum HOM05D004655 ORTHO05D005567 2.4e-101 372.9 290 69.0
ATR0693G119 Amborella trichopoda HOM05D004655 ORTHO05D005567 4.0e-101 372.1 293 68.6
PSO675G0243 Papaver somniferum HOM05D004655 ORTHO05D005567 5.3e-101 371.7 293 68.3
TAR629G1482 Trochodendron aralioides HOM05D004655 ORTHO05D005567 6.9e-101 371.3 291 69.4
TAR627G0814 Trochodendron aralioides HOM05D004655 ORTHO05D005567 9.0e-101 370.9 291 70.4
CiPaw.04G122300 Carya illinoinensis HOM05D004655 ORTHO05D005567 1.2e-100 370.5 290 68.6
Glyma.12G106600 Glycine max HOM05D004655 ORTHO05D005567 1.5e-100 370.2 283 71.4
Hma1.2p1_0662F.1_g198360 Hydrangea macrophylla HOM05D004655 ORTHO05D005567 1.5e-100 370.2 291 70.4
Lj3g0017119 Lotus japonicus HOM05D004655 ORTHO05D005567 1.5e-100 370.2 286 68.5
unitig_21.g20001 Utricularia gibba HOM05D004655 ORTHO05D005567 1.5e-100 370.2 297 66.7
arahy.Tifrunner.gnm1.ann1.S2JPPU Arachis hypogaea HOM05D004655 ORTHO05D005567 2.0e-100 369.8 300 66.3
Psat7g149680 Pisum sativum HOM05D004655 ORTHO05D005567 2.0e-100 369.8 289 70.2
TPR.G21652 Trifolium pratense HOM05D004655 ORTHO05D005567 2.0e-100 369.8 261 73.2
Cfa014528 Carpinus fangiana HOM05D004655 ORTHO05D005567 2.6e-100 369.4 243 77.4
MBI18_g27693_MAGBIO Magnolia biondii HOM05D004655 ORTHO05D005567 2.6e-100 369.4 289 69.2
arahy.Tifrunner.gnm1.ann1.81TW8H Arachis hypogaea HOM05D004655 ORTHO05D005567 3.4e-100 369.0 293 68.3
Potri.019G117900 Populus trichocarpa HOM05D004655 ORTHO05D005567 5.8e-100 368.2 291 68.4
vmacro12257 Vaccinium macrocarpon HOM05D004655 ORTHO05D005567 1.3e-99 367.1 293 68.9
PSO541G1277 Papaver somniferum HOM05D004655 ORTHO05D005567 1.7e-99 366.7 289 68.2
CANSAT64G1156 Cannabis sativa HOM05D004655 ORTHO05D005567 2.2e-99 366.3 291 69.1
Glyma.06G299100 Glycine max HOM05D004655 ORTHO05D005567 3.8e-99 365.5 282 70.6
VMungo1127G2245 Vigna mungo HOM05D004655 ORTHO05D005567 6.4e-99 364.8 240 77.5
Sc12g0002690 Simmondsia chinensis HOM05D004655 ORTHO05D005567 1.4e-98 363.6 289 69.9
CiPaw.03G168300 Carya illinoinensis HOM05D004655 ORTHO05D005567 1.9e-98 363.2 290 66.6
Cc05_g06070 Coffea canephora HOM05D004655 ORTHO05D005567 1.9e-98 363.2 296 68.9
DCAR_012973 Daucus carota HOM05D004655 ORTHO05D005567 1.9e-98 363.2 291 68.0
Lj1C737G5 Lonicera japonica HOM05D004655 ORTHO05D005567 2.4e-98 362.8 323 64.1
Phvul.011G110700 Phaseolus vulgaris HOM05D004655 ORTHO05D005567 9.3e-98 360.9 240 77.5
CSS0020863 Camellia sinensis var. sinensis HOM05D004655 ORTHO05D005567 2.1e-97 359.8 291 67.4
Os07g0558500 Oryza sativa ssp. japonica HOM05D004655 ORTHO05D005567 2.7e-97 359.4 293 67.9
Zm00001eb324100 Zea mays HOM05D004655 ORTHO05D005567 2.7e-97 359.4 289 67.1
CSS0004933 Camellia sinensis var. sinensis HOM05D004655 ORTHO05D005567 4.6e-97 358.6 291 67.0
ECA246G4617 Erigeron canadensis HOM05D004655 ORTHO05D005567 6.0e-97 358.2 294 67.0
Rhsim06G0153100 Rhododendron simsii HOM05D004655 ORTHO05D005567 7.8e-97 357.8 314 64.6
Medtr2g089795 Medicago truncatula HOM05D004655 ORTHO05D005567 1.7e-96 356.7 286 68.5
Nn1g06795 Nelumbo nucifera HOM05D004655 ORTHO05D005567 2.3e-96 356.3 272 70.2
Nn1g06798 Nelumbo nucifera HOM05D004655 ORTHO05D005567 2.3e-96 356.3 272 70.2
SGA_v2.0_scaffold70G23458 Striga asiatica HOM05D004655 ORTHO05D005567 3.0e-96 355.9 266 71.4
Hma1.2p1_0565F.1_g179650 Hydrangea macrophylla HOM05D004655 ORTHO05D005567 6.6e-96 354.8 292 68.2
Aqoxy1G03905 Aquilegia oxysepala HOM05D004655 ORTHO05D005567 1.5e-95 353.6 290 68.3
HPP92_012362 Vanilla planifolia HOM05D004655 ORTHO05D005567 9.6e-95 350.9 297 64.3
SGA_v2.0_scaffold34G13911 Striga asiatica HOM05D004655 ORTHO05D005567 3.6e-94 349.0 348 59.8
Ca_20707_v3 Cicer arietinum L. HOM05D004655 ORTHO05D005567 4.8e-94 348.6 271 69.4
DCAR_019200 Daucus carota HOM05D004655 ORTHO05D005567 6.2e-94 348.2 226 77.9
SalBow7G2858 Salvia bowleyana HOM05D004655 ORTHO05D005567 2.0e-92 343.2 266 68.4
Sabra19G0118300 Salix brachista HOM05D004655 ORTHO05D005567 3.4e-92 342.4 339 58.1
Sabra19G0135300 Salix brachista HOM05D004655 ORTHO05D005567 7.6e-92 341.3 339 58.1
CAN.G508.2 Capsicum annuum HOM05D004655 ORTHO05D005567 9.9e-92 340.9 220 77.3
SalBow1G2826 Salvia bowleyana HOM05D004655 ORTHO05D005567 9.9e-92 340.9 229 74.2
Haze_13070 Corylus avellana HOM05D004655 ORTHO05D005567 1.7e-91 340.1 305 61.0
Peaxi162Scf00007g02516 Petunia axillaris HOM05D004655 ORTHO05D005567 3.9e-88 328.9 324 59.3
Sabra13G0119700 Salix brachista HOM05D004655 ORTHO05D005567 3.9e-88 328.9 302 64.6
Duzib052G1220 Durio zibethinus HOM05D004655 ORTHO05D005567 1.9e-87 326.6 292 65.1
Nitab4.5_0000769g0070 Nicotiana tabacum HOM05D004655 ORTHO05D005567 6.2e-86 321.6 289 64.0
Lj8C118T0 Lonicera japonica HOM05D004655 ORTHO05D005567 1.1e-82 310.8 226 73.5
Duzib248G0290 Durio zibethinus HOM05D004655 ORTHO05D005567 1.4e-82 310.5 196 80.6
Nitab4.5_0001019g0090 Nicotiana tabacum HOM05D004655 ORTHO05D005567 1.4e-82 310.5 215 75.3
Pp3c19_17570 Physcomitrium patens HOM05D004655 ORTHO05D005567 4.2e-82 308.9 230 66.1
Pp3c21_14540 Physcomitrium patens HOM05D004655 ORTHO05D005567 6.0e-81 305.1 253 61.7
AagrBONN_evm.TU.Sc2ySwM_344.251 Anthoceros agrestis HOM05D004655 ORTHO05D005567 4.3e-79 298.9 221 67.4
FAN09G1462 Fragaria x ananassa HOM05D004655 ORTHO05D005567 6.2e-78 295.0 295 60.7
SMO266G0053 Selaginella moellendorffii HOM05D004655 ORTHO05D005567 5.3e-77 292.0 201 70.6
Mapoly0010s0156 Marchantia polymorpha HOM05D004655 ORTHO05D005567 9.0e-77 291.2 296 54.4
Zm00001eb106830 Zea mays HOM05D004655 ORTHO05D005567 3.4e-76 289.3 192 77.6
Sc12g0003940 Simmondsia chinensis HOM05D004655 ORTHO05D005567 3.8e-75 285.8 232 67.7
Ah.01g014420 Amaranthus hybridus HOM05D004655 ORTHO05D005567 3.2e-74 282.7 229 67.2
AUR62032764 Chenopodium quinoa HOM05D001718 ORTHO05D008006 9.3e-74 281.2 263 61.2
AUR62037125 Chenopodium quinoa HOM05D001718 ORTHO05D008006 2.1e-73 280.0 263 61.2
Cpa.g.sc34.80 Carica papaya HOM05D004655 ORTHO05D005567 1.5e-60 237.3 192 66.7
Dinv15502 Davidia involucrata HOM05D004655 ORTHO05D005567 2.9e-59 233.0 186 68.3
PRCOL_00003577 Prasinoderma coloniale HOM05D004655 ORTHO05D005567 1.8e-56 223.8 227 50.7
CBR_g78876 Chara braunii HOM05D004655 ORTHO05D005567 1.5e-55 220.7 240 49.2
CDE05G0437 Ceratophyllum demersum HOM05D004655 ORTHO05D005567 7.2e-50 201.8 151 66.9
CDE05G0433 Ceratophyllum demersum HOM05D004655 ORTHO05D005567 5.2e-48 195.7 180 61.1
Cre13.g562850 Chlamydomonas reinhardtii HOM05D004655 ORTHO05D005567 2.6e-47 193.4 246 43.9
SEGI_32441 Sequoiadendron giganteum HOM05D004655 ORTHO05D005567 6.1e-41 172.2 165 61.2
MCO07G428 Micromonas commoda HOM05D004655 ORTHO05D005567 3.4e-39 166.4 252 40.1
VMungo0720G1089 Vigna mungo HOM05D004655 ORTHO05D005567 7.0e-21 105.5 59 88.1
Cpa.g.sc34.79 Carica papaya HOM05D004655 ORTHO05D005567 1.7e-19 100.9 66 80.3
ClCG02G001370 Citrullus lanatus HOM05D004655 ORTHO05D005567 9.5e-18 95.1 63 81.0
Sed0002097 Sechium edule HOM05D004655 ORTHO05D005567 6.8e-16 89.0 284 32.7
Oeu029438.1 Olea europaea HOM05D004655 ORTHO05D005567 1.2e-12 78.2 47 74.5
Sabra19G0118700 Salix brachista HOM05D004655 ORTHO05D005567 1.7e-11 74.3 114 43.9
Hma1.2p1_0479F.1_g161430 Hydrangea macrophylla HOM05D001315 ORTHO05D001618 1.2e-09 68.2 84 51.2


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