Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p58330 Brassica napus HOM05D007135 ORTHO05D008880 3.1e-44 181.4 92 100.0
BraA09t41224Z Brassica rapa HOM05D007135 ORTHO05D008880 1.2e-40 169.5 93 94.6
BolC8t51729H Brassica oleracea HOM05D007135 ORTHO05D008880 1.0e-39 166.4 92 92.4
C08p41660 Brassica napus HOM05D007135 ORTHO05D008880 1.8e-39 165.6 95 91.6
BcaB08g34980 Brassica carinata HOM05D007135 ORTHO05D008880 3.1e-36 154.8 88 89.8
BcaC02g08801 Brassica carinata HOM05D007135 ORTHO05D008880 1.6e-35 152.5 95 83.2
BolC4t26651H Brassica oleracea HOM05D007135 ORTHO05D008880 1.6e-35 152.5 95 83.2
C04p50530 Brassica napus HOM05D007135 ORTHO05D008880 2.6e-35 151.8 95 83.2
Thhalv10000391m.g Eutrema salsugineum HOM05D007135 ORTHO05D008880 1.1e-33 146.4 98 80.6
AT2G21290 Arabidopsis thaliana HOM05D007135 ORTHO05D008880 1.9e-33 145.6 98 79.6
Aa31LG7G15200 Aethionema arabicum HOM05D007135 ORTHO05D008880 2.5e-33 145.2 93 79.6
Carub.0004s0033 Capsella rubella HOM05D007135 ORTHO05D008880 2.5e-33 145.2 98 79.6
BcaC07g41158 Brassica carinata HOM05D007135 ORTHO05D008880 3.2e-33 144.8 92 83.7
AL4G10430 Arabidopsis lyrata HOM05D007135 ORTHO05D008880 4.2e-33 144.4 95 78.9
A04p16070 Brassica napus HOM05D007135 ORTHO05D008880 4.2e-33 144.4 97 82.5
BraA04t17247Z Brassica rapa HOM05D007135 ORTHO05D008880 4.2e-33 144.4 97 82.5
Sp4g00480 Schrenkiella parvula HOM05D007135 ORTHO05D008880 5.5e-33 144.1 98 78.6
CARHR112160 Cardamine hirsuta HOM05D007135 ORTHO05D008880 4.7e-32 141.0 98 77.6
Duzib132G0527 Durio zibethinus HOM05D007135 ORTHO05D008880 2.5e-25 118.6 90 68.9
COL.COLO4_26047 Corchorus olitorius HOM05D007135 ORTHO05D008880 4.2e-25 117.9 90 68.9
Gohir.D02G222000 Gossypium hirsutum HOM05D007135 ORTHO05D008880 5.5e-25 117.5 90 65.6
Manes.11G081700 Manihot esculenta HOM05D007135 ORTHO05D008880 7.2e-25 117.1 92 67.4
Gorai.005G250000 Gossypium raimondii HOM05D007135 ORTHO05D008880 1.2e-24 116.3 90 65.6
QL11p046458 Quercus lobata HOM05D007135 ORTHO05D008880 2.7e-24 115.2 98 63.3
Gorai.002G149200 Gossypium raimondii HOM05D007135 ORTHO05D008880 4.7e-24 114.4 90 63.3
Cfa005113 Carpinus fangiana HOM05D007135 ORTHO05D008880 6.1e-24 114.0 90 67.8
MD10G1062900 Malus domestica HOM05D007135 ORTHO05D008880 6.1e-24 114.0 100 62.0
Potri.004G163100 Populus trichocarpa HOM05D007135 ORTHO05D008880 6.1e-24 114.0 95 64.2
TWI75G0424 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 6.1e-24 114.0 91 63.7
PGR142G3962 Punica granatum HOM05D007135 ORTHO05D008880 1.0e-23 113.2 94 67.0
Thecc.02G074900 Theobroma cacao HOM05D007135 ORTHO05D008880 1.0e-23 113.2 90 67.8
Atru.chr5.3145 Acer truncatum HOM05D007135 ORTHO05D008880 1.4e-23 112.8 90 63.3
Manes.04G083200 Manihot esculenta HOM05D007135 ORTHO05D008880 1.4e-23 112.8 92 65.2
Aqoxy2G03368 Aquilegia oxysepala HOM05D007135 ORTHO05D008880 1.8e-23 112.5 96 66.7
Ciclev10029699m.g Citrus clementina HOM05D007135 ORTHO05D008880 1.8e-23 112.5 88 70.5
RcHm_v2.0_Chr6g0267951 Rosa chinensis HOM05D007135 ORTHO05D008880 2.3e-23 112.1 94 62.8
Haze_02238 Corylus avellana HOM05D007135 ORTHO05D008880 3.0e-23 111.7 90 65.6
Potri.009G124700 Populus trichocarpa HOM05D007135 ORTHO05D008880 3.0e-23 111.7 92 65.2
FAN15G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 5.2e-23 110.9 90 62.2
Gohir.A03G200700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 5.2e-23 110.9 90 63.3
Cpa.g.sc150.16 Carica papaya HOM05D007135 ORTHO05D008880 6.8e-23 110.5 90 65.6
FAN27G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 8.8e-23 110.2 90 61.1
Duzib248G1605 Durio zibethinus HOM05D007135 ORTHO05D008880 1.5e-22 109.4 93 65.6
CANSAT11G0395 Cannabis sativa HOM05D007135 ORTHO05D008880 2.0e-22 109.0 100 61.0
Nn5g29239 Nelumbo nucifera HOM05D007135 ORTHO05D008880 2.0e-22 109.0 89 65.2
CSS0018566 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 2.6e-22 108.6 88 65.9
DCAR_003685 Daucus carota HOM05D007135 ORTHO05D008880 2.6e-22 108.6 96 64.6
Gohir.A13G090900 Gossypium hirsutum HOM05D007135 ORTHO05D008880 2.6e-22 108.6 90 61.1
FvH4_2g10470 Fragaria vesca HOM05D007135 ORTHO05D008880 3.4e-22 108.2 87 60.9
FAN24G2677 Fragaria x ananassa HOM05D007135 ORTHO05D008880 3.4e-22 108.2 87 60.9
Prupe.8G083700 Prunus persica HOM05D007135 ORTHO05D008880 5.7e-22 107.5 99 58.6
ATR0149G014 Amborella trichopoda HOM05D007135 ORTHO05D008880 9.8e-22 106.7 92 60.9
MELO3C013419.2 Cucumis melo HOM05D007135 ORTHO05D008880 1.3e-21 106.3 90 61.1
THA.LOC104824791 Tarenaya hassleriana HOM05D007135 ORTHO05D008880 1.7e-21 105.9 82 68.3
Sed0017056 Sechium edule HOM05D007135 ORTHO05D008880 3.7e-21 104.8 90 62.2
Solyc01g110400.2 Solanum lycopersicum HOM05D007135 ORTHO05D008880 6.3e-21 104.0 90 60.0
Sopen01g052550 Solanum pennellii HOM05D007135 ORTHO05D008880 6.3e-21 104.0 90 60.0
AUR62010386 Chenopodium quinoa HOM05D007135 ORTHO05D008880 1.4e-20 102.8 93 59.1
AUR62016832 Chenopodium quinoa HOM05D007135 ORTHO05D008880 1.4e-20 102.8 93 59.1
PSO541G1924 Papaver somniferum HOM05D007135 ORTHO05D008880 1.8e-20 102.4 90 57.8
PSO675G0190 Papaver somniferum HOM05D007135 ORTHO05D008880 1.8e-20 102.4 90 58.9
ClCG02G004560 Citrullus lanatus HOM05D007135 ORTHO05D008880 2.4e-20 102.1 90 60.0
Gohir.D13G096700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 2.4e-20 102.1 82 63.4
Phvul.009G002700 Phaseolus vulgaris HOM05D007135 ORTHO05D008880 3.1e-20 101.7 78 66.7
Migut.B00173 Erythranthe guttata HOM05D007135 ORTHO05D008880 4.1e-20 101.3 95 58.9
EL10Ac9g21635 Beta vulgaris HOM05D007135 ORTHO05D008880 7.0e-20 100.5 93 57.0
unitig_60.g25867 Utricularia gibba HOM05D007135 ORTHO05D008880 9.1e-20 100.1 77 68.8
Lalb_Chr23g0265121 Lupinus albus HOM05D007135 ORTHO05D008880 1.6e-19 99.4 53 88.7
Lalb_Chr23g0265141 Lupinus albus HOM05D007135 ORTHO05D008880 1.6e-19 99.4 53 88.7
MBI05_g16268_MAGBIO Magnolia biondii HOM05D007135 ORTHO05D008880 1.6e-19 99.4 95 63.2
SHI05613 Sapria himalayana HOM05D007135 ORTHO05D008880 2.0e-19 99.0 64 75.0
CAN.G170.101 Capsicum annuum HOM05D007135 ORTHO05D008880 2.7e-19 98.6 93 62.4
Lj1g0005652 Lotus japonicus HOM05D007135 ORTHO05D008880 2.7e-19 98.6 91 63.7
CSS0017994 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 3.5e-19 98.2 92 58.7
Psat5g003840 Pisum sativum HOM05D007135 ORTHO05D008880 4.5e-19 97.8 91 60.4
SalBow6G3736 Salvia bowleyana HOM05D007135 ORTHO05D008880 7.7e-19 97.1 94 60.6
MD05G1055600 Malus domestica HOM05D007135 ORTHO05D008880 1.0e-18 96.7 100 56.0
Dinv26818 Davidia involucrata HOM05D000193 ORTHO05D000402 1.7e-18 95.9 77 63.6
Sc08g0000910 Simmondsia chinensis HOM05D007135 ORTHO05D008880 1.7e-18 95.9 96 56.2
TWI79G1445 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 1.7e-18 95.9 78 66.7
TPR.G32169 Trifolium pratense HOM05D007135 ORTHO05D008880 2.9e-18 95.1 86 61.6
Cc02_g16900 Coffea canephora HOM05D007135 ORTHO05D008880 5.0e-18 94.4 98 52.0
Medtr3g117570 Medicago truncatula HOM05D007135 ORTHO05D008880 6.5e-18 94.0 91 57.1
vmacro17421 Vaccinium macrocarpon HOM05D007135 ORTHO05D008880 6.5e-18 94.0 77 66.2
Ca_15331_v3 Cicer arietinum L. HOM05D007135 ORTHO05D008880 8.5e-18 93.6 90 57.8
ECA234G2991 Erigeron canadensis HOM05D007135 ORTHO05D008880 2.5e-17 92.0 53 83.0
Os09g0528100 Oryza sativa ssp. japonica HOM05D007135 ORTHO05D008880 3.2e-17 91.7 92 55.4
Ah.01g018800 Amaranthus hybridus HOM05D007135 ORTHO05D008880 5.5e-17 90.9 92 53.3
Actinidia02247 Actinidia chinensis HOM05D007135 ORTHO05D008880 7.2e-17 90.5 100 55.0
TAR381G0296 Trochodendron aralioides HOM05D007135 ORTHO05D008880 3.6e-16 88.2 78 62.8
CiPaw.05G073400 Carya illinoinensis HOM05D007135 ORTHO05D008880 6.1e-16 87.4 77 64.9
Nitab4.5_0005932g0010 Nicotiana tabacum HOM05D007135 ORTHO05D008880 6.1e-16 87.4 79 60.8
Rhsim05G0068200 Rhododendron simsii HOM05D007135 ORTHO05D008880 6.1e-16 87.4 78 61.5
Nitab4.5_0005266g0060 Nicotiana tabacum HOM05D007135 ORTHO05D008880 3.4e-14 81.6 87 56.3
Duzib052G0169 Durio zibethinus HOM05D007135 ORTHO05D008880 5.7e-14 80.9 74 59.5
Sabra04G0109400 Salix brachista HOM05D007135 ORTHO05D008880 5.7e-14 80.9 80 57.5
GSVIVG01024170001 Vitis vinifera HOM05D007135 ORTHO05D008880 9.8e-14 80.1 78 60.3
Sabra09G0095700 Salix brachista HOM05D007135 ORTHO05D008880 1.7e-13 79.3 77 57.1
Glyma.04G007900 Glycine max HOM05D007135 ORTHO05D008880 6.3e-13 77.4 81 55.6
Glyma.06G007700 Glycine max HOM05D007135 ORTHO05D008880 7.0e-12 73.9 64 64.1
Haze_08383 Corylus avellana HOM05D007135 ORTHO05D008880 2.0e-11 72.4 50 78.0
FAN20G0703 Fragaria x ananassa HOM05D007135 ORTHO05D008880 4.5e-11 71.2 41 82.9
CsaV3_7G000400 Cucumis sativus L. HOM05D007135 ORTHO05D008880 1.3e-10 69.7 75 50.7
Peaxi162Scf00016g00015 Petunia axillaris HOM05D007135 ORTHO05D008880 1.3e-10 69.7 46 76.1
HPP92_008881 Vanilla planifolia HOM05D007135 ORTHO05D008880 2.3e-10 68.9 46 69.6
Lsat_1_v5_gn_4_67341 Lactuca sativa HOM05D007135 ORTHO05D008880 2.9e-10 68.6 85 49.4
Haze_15927 Corylus avellana HOM05D018783 ORTHO05D008880 1.1e-09 66.6 65 55.4
HanXRQChr10g0294181 Helianthus annuus HOM05D007135 ORTHO05D008880 2.5e-09 65.5 80 51.2
Zm00001eb103340 Zea mays HOM05D007135 ORTHO05D008880 2.8e-08 62.0 50 60.0
Aa31LG7G15350 Aethionema arabicum HOM05D007135 ORTHO05D008880 8.9e-07 57.0 60 55.0
RhsimUnG0003900 Rhododendron simsii HOM05D004431 ORTHO05D005053 7.5e-06 53.9 42 73.8
RhsimUnG0067300 Rhododendron simsii HOM05D004431 ORTHO05D005053 7.5e-06 53.9 42 73.8


User provided reference genes

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