Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p57160 Brassica napus HOM05D005574 ORTHO05D007102 8.8e-47 189.9 92 100.0
BraA09t41109Z Brassica rapa HOM05D005574 ORTHO05D007102 8.8e-47 189.9 92 100.0
A03p47670 Brassica napus HOM05D005574 ORTHO05D007102 3.3e-46 188.0 92 98.9
BraA09t37853Z Brassica rapa HOM05D005574 ORTHO05D007102 3.3e-46 188.0 92 98.9
BolC3t13081H Brassica oleracea HOM05D005574 ORTHO05D007102 6.3e-45 183.7 92 96.7
A02p27770 Brassica napus HOM05D005574 ORTHO05D007102 2.9e-42 174.9 92 91.3
BraA02t07818Z Brassica rapa HOM05D005574 ORTHO05D007102 2.9e-42 174.9 92 91.3
BraA07t27929Z Brassica rapa HOM05D005574 ORTHO05D007102 3.8e-42 174.5 92 92.4
C01p35960 Brassica napus HOM05D005574 ORTHO05D007102 2.0e-35 152.1 84 88.1
BolC1t04542H Brassica oleracea HOM05D005574 ORTHO05D007102 2.0e-35 152.1 84 88.1
BolC5t33236H Brassica oleracea HOM05D005574 ORTHO05D007102 2.0e-35 152.1 84 88.1
BcaC09g49493 Brassica carinata HOM05D005574 ORTHO05D007102 1.9e-33 145.6 69 100.0
BcaC09g48798 Brassica carinata HOM05D005574 ORTHO05D007102 1.4e-28 129.4 60 100.0
C03p05690 Brassica napus HOM05D005574 ORTHO05D022054 8.0e-24 113.6 67 82.1
Thhalv10002568m.g Eutrema salsugineum HOM05D005574 ORTHO05D007102 2.8e-21 105.1 84 64.3
AT1G05440 Arabidopsis thaliana HOM05D005574 ORTHO05D007102 4.8e-21 104.4 83 65.1
BcaB02g06860 Brassica carinata HOM05D005574 ORTHO05D007102 1.1e-20 103.2 83 65.1
BcaC05g24386 Brassica carinata HOM05D005574 ORTHO05D007102 3.1e-20 101.7 71 70.4
C05p03780 Brassica napus HOM05D005574 ORTHO05D007102 3.1e-20 101.7 71 70.4
BolC5t29155H Brassica oleracea HOM05D005574 ORTHO05D007102 3.1e-20 101.7 71 70.4
CARHR004930 Cardamine hirsuta HOM05D005574 ORTHO05D007102 1.6e-19 99.4 75 65.3
Aa31LG1G19200 Aethionema arabicum HOM05D005574 ORTHO05D007102 4.5e-19 97.8 74 64.9
A10p04140 Brassica napus HOM05D005574 ORTHO05D007102 4.5e-19 97.8 83 61.4
BraA10t42684Z Brassica rapa HOM05D005574 ORTHO05D007102 4.5e-19 97.8 83 61.4
BolC1t03554H Brassica oleracea HOM05D005574 ORTHO05D022054 5.9e-19 97.4 58 82.8
AL1G15280 Arabidopsis lyrata HOM05D005574 ORTHO05D007102 1.7e-18 95.9 75 64.0
Carub.0001s0477 Capsella rubella HOM05D005574 ORTHO05D007102 5.0e-18 94.4 75 64.0
BcaB07g33702 Brassica carinata HOM05D005574 ORTHO05D007102 1.9e-17 92.4 72 68.1
Sp1g04310 Schrenkiella parvula HOM05D005574 ORTHO05D007102 9.5e-17 90.1 72 63.9
Dinv44545 Davidia involucrata HOM05D005574 ORTHO05D007102 1.6e-16 89.4 77 59.7
Sabra10G0057600 Salix brachista HOM05D005574 ORTHO05D007102 3.6e-16 88.2 71 62.0
Potri.008G154400 Populus trichocarpa HOM05D005574 ORTHO05D007102 8.0e-16 87.0 61 70.5
THA.LOC104800960 Tarenaya hassleriana HOM05D005574 ORTHO05D007102 1.0e-15 86.7 78 56.4
GSVIVG01017997001 Vitis vinifera HOM05D005574 ORTHO05D007102 1.0e-15 86.7 61 65.6
CiPaw.02G098000 Carya illinoinensis HOM05D005574 ORTHO05D007102 1.4e-15 86.3 64 64.1
Potri.010G086100 Populus trichocarpa HOM05D005574 ORTHO05D007102 1.4e-15 86.3 71 62.0
Cc03_g03930 Coffea canephora HOM05D005574 ORTHO05D007102 1.8e-15 85.9 70 64.3
C01p45800 Brassica napus HOM05D005574 ORTHO05D007102 2.3e-15 85.5 40 100.0
Cfa015664 Carpinus fangiana HOM05D005574 ORTHO05D007102 2.3e-15 85.5 61 67.2
Dinv14005 Davidia involucrata HOM05D005574 ORTHO05D007102 2.3e-15 85.5 77 58.4
CSS0019466 Camellia sinensis var. sinensis HOM05D005574 ORTHO05D007102 3.0e-15 85.1 65 63.1
Peaxi162Scf00092g00614 Petunia axillaris HOM05D005574 ORTHO05D007102 3.0e-15 85.1 61 60.7
Prupe.1G015700 Prunus persica HOM05D005574 ORTHO05D007102 3.0e-15 85.1 61 67.2
Atru.chr4.2447 Acer truncatum HOM05D005574 ORTHO05D007102 4.0e-15 84.7 61 67.2
CANSAT78G2217 Cannabis sativa HOM05D005574 ORTHO05D007102 4.0e-15 84.7 61 62.3
Eucgr.B01081 Eucalyptus grandis HOM05D005574 ORTHO05D007102 4.0e-15 84.7 83 51.8
QL06p002087 Quercus lobata HOM05D005574 ORTHO05D007102 4.0e-15 84.7 61 65.6
Sed0003604 Sechium edule HOM05D005574 ORTHO05D007102 4.0e-15 84.7 64 60.9
Actinidia40140 Actinidia chinensis HOM05D005574 ORTHO05D007102 5.2e-15 84.3 72 55.6
Sed0027704 Sechium edule HOM05D005574 ORTHO05D007102 5.2e-15 84.3 61 63.9
Haze_00883 Corylus avellana HOM05D005574 ORTHO05D007102 6.8e-15 84.0 61 67.2
TWI53G0495 Tripterygium wilfordii HOM05D005574 ORTHO05D007102 6.8e-15 84.0 68 60.3
CsaV3_3G013190 Cucumis sativus L. HOM05D005574 ORTHO05D007102 1.2e-14 83.2 61 62.3
Nn6g34090 Nelumbo nucifera HOM05D005574 ORTHO05D007102 1.2e-14 83.2 61 57.4
Oeu058969.1 Olea europaea HOM05D005574 ORTHO05D007102 1.5e-14 82.8 67 59.7
VMungo0720G0566 Vigna mungo HOM05D005574 ORTHO05D007102 2.0e-14 82.4 56 66.1
MELO3C006525.2 Cucumis melo HOM05D005574 ORTHO05D007102 2.6e-14 82.0 61 60.7
FvH4_4g16270 Fragaria vesca HOM05D005574 ORTHO05D007102 2.6e-14 82.0 61 63.9
Nitab4.5_0001920g0060 Nicotiana tabacum HOM05D005574 ORTHO05D007102 2.6e-14 82.0 61 59.0
Nitab4.5_0004135g0020 Nicotiana tabacum HOM05D005574 ORTHO05D007102 2.6e-14 82.0 61 59.0
Ciclev10005241m.g Citrus clementina HOM05D005574 ORTHO05D007102 3.4e-14 81.6 60 61.7
Sopen09g031060 Solanum pennellii HOM05D005574 ORTHO05D007102 3.4e-14 81.6 61 59.0
ClCG05G005090 Citrullus lanatus HOM05D005574 ORTHO05D007102 4.4e-14 81.3 61 60.7
Solyc09g082180.3 Solanum lycopersicum HOM05D005574 ORTHO05D007102 4.4e-14 81.3 61 59.0
CAN.G2204.4 Capsicum annuum HOM05D005574 ORTHO05D007102 5.7e-14 80.9 77 50.6
RcHm_v2.0_Chr4g0415861 Rosa chinensis HOM05D005574 ORTHO05D007102 5.7e-14 80.9 61 62.3
FAN02G2947 Fragaria x ananassa HOM05D005574 ORTHO05D007102 7.5e-14 80.5 61 62.3
FAN07G2976 Fragaria x ananassa HOM05D005574 ORTHO05D007102 7.5e-14 80.5 61 62.3
FAN12G0525 Fragaria x ananassa HOM05D005574 ORTHO05D007102 7.5e-14 80.5 61 62.3
FAN12G2145 Fragaria x ananassa HOM05D005574 ORTHO05D007102 7.5e-14 80.5 61 62.3
FAN12G2997 Fragaria x ananassa HOM05D005574 ORTHO05D007102 7.5e-14 80.5 61 62.3
Gohir.D10G136700 Gossypium hirsutum HOM05D005574 ORTHO05D007102 7.5e-14 80.5 61 62.3
Gorai.011G151700 Gossypium raimondii HOM05D005574 ORTHO05D007102 7.5e-14 80.5 61 62.3
MD16G1195700 Malus domestica HOM05D005574 ORTHO05D007102 7.5e-14 80.5 61 62.3
CAN.G2204.2 Capsicum annuum HOM05D000340 ORTHO05D007102 9.8e-14 80.1 77 50.6
TPR.G5479 Trifolium pratense HOM05D005574 ORTHO05D007102 9.8e-14 80.1 61 59.0
COL.COLO4_05700 Corchorus olitorius HOM05D005574 ORTHO05D007102 1.3e-13 79.7 71 59.2
Glyma.10G247300 Glycine max HOM05D005574 ORTHO05D007102 1.3e-13 79.7 61 60.7
Glyma.20G147200 Glycine max HOM05D005574 ORTHO05D007102 1.3e-13 79.7 61 60.7
Actinidia23520 Actinidia chinensis HOM05D005574 ORTHO05D007102 1.7e-13 79.3 64 59.4
arahy.Tifrunner.gnm1.ann1.PUQJ4X Arachis hypogaea HOM05D005574 ORTHO05D007102 1.7e-13 79.3 61 59.0
arahy.Tifrunner.gnm1.ann1.R5YE9W Arachis hypogaea HOM05D005574 ORTHO05D007102 1.7e-13 79.3 61 59.0
DCAR_030644 Daucus carota HOM05D005574 ORTHO05D007102 1.7e-13 79.3 61 62.3
MD13G1194900 Malus domestica HOM05D005574 ORTHO05D007102 1.7e-13 79.3 61 62.3
Phvul.007G058100 Phaseolus vulgaris HOM05D005574 ORTHO05D007102 1.7e-13 79.3 61 57.4
SalBow2G1029 Salvia bowleyana HOM05D005574 ORTHO05D007102 1.7e-13 79.3 61 57.4
Hund12118 Selenicereus undatus HOM05D005574 ORTHO05D007102 1.7e-13 79.3 68 57.4
Sc19g0004060 Simmondsia chinensis HOM05D005574 ORTHO05D007102 1.7e-13 79.3 76 50.0
Hma1.2p1_0602F.1_g187410 Hydrangea macrophylla HOM05D005574 ORTHO05D007102 2.2e-13 79.0 61 62.3
Gohir.A10G129500 Gossypium hirsutum HOM05D005574 ORTHO05D007102 3.7e-13 78.2 68 54.4
Rhsim04G0201500 Rhododendron simsii HOM05D005574 ORTHO05D007102 3.7e-13 78.2 61 60.7
TAR362G0087 Trochodendron aralioides HOM05D005574 ORTHO05D007102 3.7e-13 78.2 61 60.7
SGA_v2.0_scaffold257G45710 Striga asiatica HOM05D005574 ORTHO05D007102 4.9e-13 77.8 69 52.2
HanXRQChr10g0294751 Helianthus annuus HOM05D005574 ORTHO05D007102 6.3e-13 77.4 55 69.1
Duzib151G0572 Durio zibethinus HOM05D005574 ORTHO05D007102 8.3e-13 77.0 61 59.0
PSO210G4004 Papaver somniferum HOM05D005574 ORTHO05D007102 8.3e-13 77.0 87 44.8
PSO761G0453 Papaver somniferum HOM05D005574 ORTHO05D007102 8.3e-13 77.0 87 44.8
Thecc.04G192400 Theobroma cacao HOM05D005574 ORTHO05D007102 8.3e-13 77.0 61 60.7
Psat6g206920 Pisum sativum HOM05D005574 ORTHO05D007102 1.1e-12 76.6 61 57.4
MSTRG.4036 Avicennia marina HOM05D005574 ORTHO05D007102 1.4e-12 76.3 61 57.4
Duzib268G0255 Durio zibethinus HOM05D005574 ORTHO05D007102 1.4e-12 76.3 71 54.9
Lj5g0023935 Lotus japonicus HOM05D005574 ORTHO05D007102 1.4e-12 76.3 61 57.4
Ah.13g071610 Amaranthus hybridus HOM05D005574 ORTHO05D007102 1.8e-12 75.9 61 62.3
CDE06G2673 Ceratophyllum demersum HOM05D005574 ORTHO05D007102 1.8e-12 75.9 64 54.7
Medtr1g103560 Medicago truncatula HOM05D005574 ORTHO05D007102 1.8e-12 75.9 61 55.7
Manes.03G177100 Manihot esculenta HOM05D005574 ORTHO05D007102 2.4e-12 75.5 61 55.7
Migut.G00347 Erythranthe guttata HOM05D005574 ORTHO05D007102 3.1e-12 75.1 61 59.0
Aqoxy2G03411 Aquilegia oxysepala HOM05D005574 ORTHO05D007102 5.4e-12 74.3 68 50.0
Lsat_1_v5_gn_5_104360 Lactuca sativa HOM05D005574 ORTHO05D007102 5.4e-12 74.3 62 58.1
ATR0697G187 Amborella trichopoda HOM05D005574 ORTHO05D007102 7.0e-12 73.9 60 56.7
EL10Ac3g06494 Beta vulgaris HOM05D005574 ORTHO05D007102 7.0e-12 73.9 61 60.7
AUR62033680 Chenopodium quinoa HOM05D005574 ORTHO05D007102 2.7e-11 72.0 61 57.4
AUR62034712 Chenopodium quinoa HOM05D005574 ORTHO05D007102 2.7e-11 72.0 61 59.0
Ca_10888_v3 Cicer arietinum L. HOM05D005574 ORTHO05D007102 3.5e-11 71.6 61 54.1
Lalb_Chr02g0140631 Lupinus albus HOM05D005574 ORTHO05D007102 3.5e-11 71.6 77 51.9
MBI15_g31435_MAGBIO Magnolia biondii HOM05D005574 ORTHO05D007102 3.5e-11 71.6 63 55.6
ECA234G0493 Erigeron canadensis HOM05D005574 ORTHO05D007102 4.5e-11 71.2 57 59.6
MSTRG.9977 Avicennia marina HOM05D005574 ORTHO05D007102 1.0e-10 70.1 68 48.5
CDE07G0532 Ceratophyllum demersum HOM05D005574 ORTHO05D007102 1.7e-10 69.3 76 46.1
ECA234G4095 Erigeron canadensis HOM05D005574 ORTHO05D007102 1.1e-09 66.6 58 60.3
SEGI_38250 Sequoiadendron giganteum HOM05D005574 ORTHO05D007102 2.5e-09 65.5 60 50.0
HPP92_009613 Vanilla planifolia HOM05D005574 ORTHO05D007102 2.8e-08 62.0 62 48.4
Cpa.g.sc58.90 Carica papaya HOM05D005574 ORTHO05D007102 8.0e-08 60.5 33 81.8
AagrBONN_evm.TU.Sc2ySwM_117.3111 Anthoceros agrestis HOM05D005574 ORTHO05D007102 4.0e-07 58.2 62 43.5
C09p41690 Brassica napus HOM05D005574 ORTHO05D022054 2.6e-06 55.5 24 100.0
SMO174G0025 Selaginella moellendorffii HOM05D005574 ORTHO05D007102 9.8e-06 53.5 73 37.0


User provided reference genes

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