Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p56750 Brassica napus HOM05D022834 ORTHO05D000724 2.8e-61 238.4 118 100.0
A08p20900 Brassica napus HOM05D022834 ORTHO05D000724 1.3e-55 219.5 111 98.2
BraA08t34042Z Brassica rapa HOM05D022834 ORTHO05D000724 1.3e-55 219.5 111 98.2
C07p39440 Brassica napus HOM05D000988 ORTHO05D000724 6.2e-45 184.1 111 88.3
BolC7t44463H Brassica oleracea HOM05D000988 ORTHO05D000724 6.2e-45 184.1 111 88.3
BcaC06g30755 Brassica carinata HOM05D000988 ORTHO05D000724 1.4e-44 183.0 111 87.4
A06p38880 Brassica napus HOM05D000988 ORTHO05D000724 3.1e-44 181.8 111 85.6
BraA06t26803Z Brassica rapa HOM05D000988 ORTHO05D000724 6.8e-44 180.6 111 84.7
C08p07750 Brassica napus HOM05D022834 ORTHO05D041206 6.4e-42 174.1 111 83.8
BolC8t47623H Brassica oleracea HOM05D022834 ORTHO05D041206 6.4e-42 174.1 111 83.8
Thhalv10004871m.g Eutrema salsugineum HOM05D000988 ORTHO05D000724 3.8e-34 148.3 127 70.9
Sp2g19210 Schrenkiella parvula HOM05D000988 ORTHO05D000724 9.2e-33 143.7 127 69.3
AL8G21990 Arabidopsis lyrata HOM05D000988 ORTHO05D000724 3.4e-27 125.2 114 66.7
Carub.0008s0855 Capsella rubella HOM05D000988 ORTHO05D000724 3.4e-27 125.2 114 66.7
CARHR182920 Cardamine hirsuta HOM05D000988 ORTHO05D000724 1.7e-26 122.9 118 63.6
BcaB04g19585 Brassica carinata HOM05D000988 ORTHO05D000724 1.9e-25 119.4 112 67.0
AT5G48820 Arabidopsis thaliana HOM05D000988 ORTHO05D000724 2.4e-25 119.0 115 65.2
A09p04640 Brassica napus HOM05D000988 ORTHO05D000724 6.9e-20 100.9 108 60.2
BraA09t36100Z Brassica rapa HOM05D000988 ORTHO05D000724 6.9e-20 100.9 108 60.2
BcaC04g23761 Brassica carinata HOM05D000988 ORTHO05D000724 3.8e-18 95.1 109 59.6
C09p04950 Brassica napus HOM05D000988 ORTHO05D000724 3.8e-18 95.1 109 59.6
BolC9t53423H Brassica oleracea HOM05D000988 ORTHO05D000724 3.8e-18 95.1 109 59.6
THA.LOC104818958 Tarenaya hassleriana HOM05D000988 ORTHO05D000724 3.8e-18 95.1 139 47.5
Aa31LG5G17660 Aethionema arabicum HOM05D000988 ORTHO05D000724 8.7e-15 84.0 123 48.8
THA.LOC104822503 Tarenaya hassleriana HOM05D000988 ORTHO05D000724 8.7e-15 84.0 145 42.8
Cpa.g.sc8.159 Carica papaya HOM05D000988 ORTHO05D000724 9.6e-14 80.5 112 47.3
Nitab4.5_0000045g0150 Nicotiana tabacum HOM05D000988 ORTHO05D000724 9.9e-11 70.5 108 50.0
Nitab4.5_0003312g0070 Nicotiana tabacum HOM05D000988 ORTHO05D000724 1.3e-10 70.1 107 46.7
GSVIVG01028640001 Vitis vinifera HOM05D000988 ORTHO05D000724 2.2e-10 69.3 94 50.0
Sed0008023 Sechium edule HOM05D000988 ORTHO05D000724 1.4e-09 66.6 83 54.2
Manes.12G045650 Manihot esculenta HOM05D000988 ORTHO05D000724 1.9e-09 66.2 110 46.4
TAR636G2975 Trochodendron aralioides HOM05D000988 ORTHO05D000724 1.9e-09 66.2 118 44.9
Cc01_g17060 Coffea canephora HOM05D000988 ORTHO05D000724 2.4e-09 65.9 89 55.1
Sed0019351 Sechium edule HOM05D000988 ORTHO05D000724 5.5e-09 64.7 82 52.4
TAR365G0156 Trochodendron aralioides HOM05D000988 ORTHO05D000724 5.5e-09 64.7 103 44.7
Aa31LG9G4710 Aethionema arabicum HOM05D000988 ORTHO05D000724 9.3e-09 63.9 107 42.1
Nn3g19961 Nelumbo nucifera HOM05D000988 ORTHO05D000724 9.3e-09 63.9 123 41.5
Nn1g07848 Nelumbo nucifera HOM05D000988 ORTHO05D000724 1.6e-08 63.2 135 39.3
Glyma.20G198800 Glycine max HOM05D000988 ORTHO05D000724 2.7e-08 62.4 92 46.7
Oeu016719.1 Olea europaea HOM05D000988 ORTHO05D000724 2.7e-08 62.4 96 50.0
Cc01_g17050 Coffea canephora HOM05D000988 ORTHO05D000724 3.5e-08 62.0 90 55.6
MD04G1005800 Malus domestica HOM05D000988 ORTHO05D000724 3.5e-08 62.0 97 49.5
CsaV3_3G029910 Cucumis sativus L. HOM05D000988 ORTHO05D000724 4.6e-08 61.6 119 39.5
Thecc.01G226300 Theobroma cacao HOM05D000988 ORTHO05D000724 6.0e-08 61.2 95 47.4
Potri.002G242100 Populus trichocarpa HOM05D000988 ORTHO05D000724 7.9e-08 60.8 77 58.4
TWI18G0513 Tripterygium wilfordii HOM05D000988 ORTHO05D000724 7.9e-08 60.8 66 65.2
Dinv38246 Davidia involucrata HOM05D000988 ORTHO05D000724 1.0e-07 60.5 105 46.7
MELO3C026998.2 Cucumis melo HOM05D000988 ORTHO05D000724 1.3e-07 60.1 108 40.7
Peaxi162Scf00938g00430 Petunia axillaris HOM05D000988 ORTHO05D000724 1.3e-07 60.1 116 40.5
Peaxi162Scf00107g01914 Petunia axillaris HOM05D000988 ORTHO05D000724 1.8e-07 59.7 107 45.8
Sc13g0000110 Simmondsia chinensis HOM05D000988 ORTHO05D000724 1.8e-07 59.7 81 50.6
Dinv19206 Davidia involucrata HOM05D000988 ORTHO05D000724 2.3e-07 59.3 128 38.3
Dinv29587 Davidia involucrata HOM05D000988 ORTHO05D000724 2.3e-07 59.3 80 48.8
Duzib138G0777 Durio zibethinus HOM05D000988 ORTHO05D000724 3.0e-07 58.9 95 47.4
Sabra02G0184300 Salix brachista HOM05D000988 ORTHO05D000724 3.0e-07 58.9 105 46.7
Solyc12g098310.2 Solanum lycopersicum HOM05D000988 ORTHO05D000724 3.0e-07 58.9 69 56.5
Sopen00g011190 Solanum pennellii HOM05D000988 ORTHO05D000724 3.0e-07 58.9 69 56.5
Sopen12g033090 Solanum pennellii HOM05D000988 ORTHO05D000724 3.0e-07 58.9 69 56.5
PGSC0003DMG400007708 Solanum tuberosum HOM05D000988 ORTHO05D000724 3.0e-07 58.9 69 56.5
CSS0020824 Camellia sinensis var. sinensis HOM05D000988 ORTHO05D000724 5.1e-07 58.2 119 42.0
Lj2A1131T40 Lonicera japonica HOM05D000988 ORTHO05D000724 5.1e-07 58.2 116 40.5
ClCG07G001920 Citrullus lanatus HOM05D000988 ORTHO05D000724 6.7e-07 57.8 74 51.4
RcHm_v2.0_Chr6g0284901 Rosa chinensis HOM05D000988 ORTHO05D000724 6.7e-07 57.8 85 47.1
CSS0039793 Camellia sinensis var. sinensis HOM05D000988 ORTHO05D000724 1.1e-06 57.0 75 52.0
Ciclev10005793m.g Citrus clementina HOM05D000988 ORTHO05D000724 1.1e-06 57.0 71 54.9
Dinv04651 Davidia involucrata HOM05D000988 ORTHO05D000724 1.1e-06 57.0 78 50.0
Hma1.2p1_0226F.1_g095740 Hydrangea macrophylla HOM05D000988 ORTHO05D000724 1.1e-06 57.0 117 37.6
PGR044G2689 Punica granatum HOM05D000988 ORTHO05D000724 1.1e-06 57.0 97 47.4
COL.COLO4_10276 Corchorus olitorius HOM05D000988 ORTHO05D000724 1.5e-06 56.6 94 42.6
Phvul.L002172 Phaseolus vulgaris HOM05D000988 ORTHO05D000724 1.5e-06 56.6 92 44.6
VMungo0720G1882 Vigna mungo HOM05D000988 ORTHO05D000724 1.5e-06 56.6 92 44.6
FvH4_2g19080 Fragaria vesca HOM05D000988 ORTHO05D000724 1.9e-06 56.2 105 45.7
Gohir.D05G316900 Gossypium hirsutum HOM05D000988 ORTHO05D000724 1.9e-06 56.2 91 44.0
TWI36G1195 Tripterygium wilfordii HOM05D000988 ORTHO05D000724 1.9e-06 56.2 65 63.1
Gorai.009G339200 Gossypium raimondii HOM05D000988 ORTHO05D000724 2.5e-06 55.8 91 44.0
HanXRQChr04g0110791 Helianthus annuus HOM05D000988 ORTHO05D000724 2.5e-06 55.8 100 39.0
Oeu004061.1 Olea europaea HOM05D000988 ORTHO05D000724 2.5e-06 55.8 107 42.1
Oeu006727.2 Olea europaea HOM05D000988 ORTHO05D000724 2.5e-06 55.8 94 43.6
ECA236G4283 Erigeron canadensis HOM05D000988 ORTHO05D000724 3.3e-06 55.5 83 47.0
FAN24G2948 Fragaria x ananassa HOM05D000988 ORTHO05D000724 3.3e-06 55.5 105 45.7
Medtr7g057920 Medicago truncatula HOM05D000988 ORTHO05D000724 3.3e-06 55.5 90 48.9
THA.LOC104821646 Tarenaya hassleriana HOM05D000988 ORTHO05D000724 4.3e-06 55.1 82 47.6
CSS0048702 Camellia sinensis var. sinensis HOM05D000988 ORTHO05D000724 5.6e-06 54.7 118 44.1
Nitab4.5_0000850g0010 Nicotiana tabacum HOM05D000988 ORTHO05D000724 5.6e-06 54.7 125 39.2
SGA_v2.0_scaffold8G04637 Striga asiatica HOM05D000988 ORTHO05D000724 5.6e-06 54.7 69 52.2
Ca_07515_v3 Cicer arietinum L. HOM05D000988 ORTHO05D000724 7.4e-06 54.3 71 52.1
Lalb_Chr21g0312561 Lupinus albus HOM05D000988 ORTHO05D000724 7.4e-06 54.3 106 43.4
TPR.G9039 Trifolium pratense HOM05D000988 ORTHO05D000724 7.4e-06 54.3 78 48.7
Atru.chr4.1721 Acer truncatum HOM05D000988 ORTHO05D000724 9.6e-06 53.9 84 47.6
CARHR101160 Cardamine hirsuta HOM05D000988 ORTHO05D000724 9.6e-06 53.9 80 45.0
CDE08G0445 Ceratophyllum demersum HOM05D000988 ORTHO05D000724 9.6e-06 53.9 101 41.6
Duzib211G0624 Durio zibethinus HOM05D000988 ORTHO05D000724 9.6e-06 53.9 101 45.5


User provided reference genes

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