Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p56630 Brassica napus HOM05D005503 ORTHO05D007451 5.3e-156 554.3 277 100.0
BraA09t41054Z Brassica rapa HOM05D005503 ORTHO05D007451 5.3e-156 554.3 277 100.0
A09p56430 Brassica napus HOM05D005503 ORTHO05D007451 1.3e-138 496.5 274 88.7
BraA09t41037Z Brassica rapa HOM05D005503 ORTHO05D007451 1.3e-138 496.5 274 88.7
C08p39580 Brassica napus HOM05D005503 ORTHO05D007451 3.8e-138 495.0 274 89.1
BcaC07g40964 Brassica carinata HOM05D005503 ORTHO05D007451 8.5e-138 493.8 274 88.7
BcaC07g40948 Brassica carinata HOM05D005503 ORTHO05D007451 7.2e-137 490.7 274 89.8
BolC8t51514H Brassica oleracea HOM05D005503 ORTHO05D007451 7.2e-137 490.7 274 89.8
C08p39400 Brassica napus HOM05D005503 ORTHO05D007451 1.2e-131 473.4 274 86.9
BolC4t26724H Brassica oleracea HOM05D005503 ORTHO05D007451 1.8e-124 449.5 286 79.4
BcaC02g08721 Brassica carinata HOM05D005503 ORTHO05D007451 2.5e-121 439.1 279 78.9
C04p51340 Brassica napus HOM05D005503 ORTHO05D007451 5.6e-121 438.0 279 79.6
Sp6g38750 Schrenkiella parvula HOM05D005503 ORTHO05D007451 9.5e-113 410.6 277 75.8
BolC8t51531H Brassica oleracea HOM05D005503 ORTHO05D007451 1.4e-100 370.2 207 89.4
Thhalv10027188m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 3.5e-99 365.5 276 68.5
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 1.6e-96 356.7 279 68.5
Thhalv10015674m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 1.6e-96 356.7 289 67.1
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 1.3e-93 347.1 279 67.4
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 1.1e-92 344.0 277 67.1
Thhalv10015413m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 1.1e-92 344.0 289 64.4
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 1.9e-92 343.2 277 66.8
Thhalv10027472m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 4.2e-92 342.0 276 65.2
Thhalv10023018m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 4.4e-86 322.0 251 66.9
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 4.6e-83 312.0 274 62.8
AL6G13600 Arabidopsis lyrata HOM05D005503 ORTHO05D007451 5.8e-70 268.5 285 53.0
AT5G04010 Arabidopsis thaliana HOM05D005503 ORTHO05D007451 1.1e-68 264.2 280 52.1
Carub.0006s0294 Capsella rubella HOM05D005503 ORTHO05D007451 6.9e-63 245.0 288 49.0
CARHR209270 Cardamine hirsuta HOM05D005503 ORTHO05D007451 2.5e-57 226.5 266 45.9
Aa31LG6G5380 Aethionema arabicum HOM05D005503 ORTHO05D007451 2.8e-48 196.4 279 44.8
THA.LOC104816403 Tarenaya hassleriana HOM05D007529 ORTHO05D007451 3.2e-28 129.8 251 37.1
Aa31LG6G5360 Aethionema arabicum HOM05D005503 ORTHO05D007451 1.3e-24 117.9 260 35.0
Lalb_Chr02g0156441 Lupinus albus HOM05D007529 ORTHO05D007451 1.7e-21 107.5 258 28.7
THA.LOC104825175 Tarenaya hassleriana HOM05D007529 ORTHO05D007451 3.8e-21 106.3 236 32.2
CANSAT80G2089 Cannabis sativa HOM05D007529 ORTHO05D007451 4.7e-19 99.4 243 30.9
Nn2g15054 Nelumbo nucifera HOM05D007529 ORTHO05D007451 1.4e-18 97.8 250 30.4
CANSAT80G1192 Cannabis sativa HOM05D007529 ORTHO05D007451 3.0e-18 96.7 243 30.5
Atru.chr1.1251 Acer truncatum HOM05D007529 ORTHO05D007451 4.0e-18 96.3 250 30.8
AT5G03920 Arabidopsis thaliana HOM05D021302 ORTHO05D021386 1.5e-17 94.4 147 43.5
QL07p004579 Quercus lobata HOM05D007529 ORTHO05D007451 1.5e-17 94.4 250 29.6
Dinv30288 Davidia involucrata HOM05D007529 ORTHO05D007451 2.6e-17 93.6 245 29.4
TWI74G0965 Tripterygium wilfordii HOM05D007529 ORTHO05D007451 5.7e-17 92.4 252 30.2
Prupe.7G049500 Prunus persica HOM05D007529 ORTHO05D007451 7.5e-17 92.0 246 29.3
Sed0023165 Sechium edule HOM05D007529 ORTHO05D007451 1.7e-16 90.9 260 28.1
Ca_23805_v3 Cicer arietinum L. HOM05D007529 ORTHO05D007451 6.3e-16 89.0 251 29.5
MD14G1081300 Malus domestica HOM05D007529 ORTHO05D007451 1.1e-15 88.2 243 30.5
Medtr1g041810 Medicago truncatula HOM05D007529 ORTHO05D007451 1.8e-15 87.4 253 28.9
VMungo0720G2145 Vigna mungo HOM05D007529 ORTHO05D007451 1.8e-15 87.4 243 28.4
Gorai.002G227400 Gossypium raimondii HOM05D007529 ORTHO05D007451 3.1e-15 86.7 236 27.5
Lsat_1_v5_gn_5_161020 Lactuca sativa HOM05D007529 ORTHO05D007451 3.1e-15 86.7 245 31.4
Phvul.007G249000 Phaseolus vulgaris HOM05D007529 ORTHO05D007451 7.0e-15 85.5 183 30.6
TPR.G19652 Trifolium pratense HOM05D007529 ORTHO05D007451 7.0e-15 85.5 265 29.1
Ah.13g076730 Amaranthus hybridus HOM05D007529 ORTHO05D007451 9.2e-15 85.1 249 28.5
Migut.K00115 Erythranthe guttata HOM05D007529 ORTHO05D007451 9.2e-15 85.1 249 27.7
Glyma.02G191900 Glycine max HOM05D007529 ORTHO05D007451 9.2e-15 85.1 248 25.8
Gohir.A01G193700 Gossypium hirsutum HOM05D007529 ORTHO05D007451 1.2e-14 84.7 239 27.2
Gohir.D01G183900 Gossypium hirsutum HOM05D007529 ORTHO05D007451 1.6e-14 84.3 235 27.2
Sc19g0008410 Simmondsia chinensis HOM05D007529 ORTHO05D007451 1.6e-14 84.3 257 29.2
ECA248G1753 Erigeron canadensis HOM05D007529 ORTHO05D007451 3.5e-14 83.2 245 29.0
FAN22G0851 Fragaria x ananassa HOM05D007529 ORTHO05D007451 3.5e-14 83.2 179 31.8
MBI19_g17527_MAGBIO Magnolia biondii HOM05D007529 ORTHO05D007451 4.5e-14 82.8 245 28.2
Potri.004G076800 Populus trichocarpa HOM05D007529 ORTHO05D007451 5.9e-14 82.4 264 26.1
Potri.006G044801 Populus trichocarpa HOM05D007529 ORTHO05D007451 5.9e-14 82.4 252 27.8
RcHm_v2.0_Chr3g0484581 Rosa chinensis HOM05D007529 ORTHO05D007451 5.9e-14 82.4 240 26.7
PGR142G2784 Punica granatum HOM05D007529 ORTHO05D007451 7.7e-14 82.0 257 29.2
FAN07G2804 Fragaria x ananassa HOM05D007529 ORTHO05D007451 1.0e-13 81.6 179 31.8
arahy.Tifrunner.gnm1.ann1.5P9T4R Arachis hypogaea HOM05D007529 ORTHO05D007451 1.3e-13 81.3 123 37.4
Nitab4.5_0011420g0010 Nicotiana tabacum HOM05D007529 ORTHO05D007451 1.3e-13 81.3 257 27.2
FvH4_4g15570 Fragaria vesca HOM05D007529 ORTHO05D007451 2.9e-13 80.1 179 30.2
FAN22G0252 Fragaria x ananassa HOM05D007529 ORTHO05D007451 3.8e-13 79.7 179 29.6
Nitab4.5_0001618g0110 Nicotiana tabacum HOM05D007529 ORTHO05D007451 6.6e-13 79.0 247 27.5
Sabra06G0031000 Salix brachista HOM05D005255 ORTHO05D006276 6.6e-13 79.0 242 26.0
EL10Ac3g07171 Beta vulgaris HOM05D007529 ORTHO05D007451 1.1e-12 78.2 256 26.2
FvH4_4g15460 Fragaria vesca HOM05D007529 ORTHO05D007451 1.5e-12 77.8 179 29.1
FvH4_6g24810 Fragaria vesca HOM05D007529 ORTHO05D007451 1.5e-12 77.8 246 26.4
ClCG04G003960 Citrullus lanatus HOM05D007529 ORTHO05D007451 1.9e-12 77.4 267 26.2
CsaV3_4G021910 Cucumis sativus L. HOM05D007529 ORTHO05D007451 3.3e-12 76.6 272 25.0
FAN12G3128 Fragaria x ananassa HOM05D007529 ORTHO05D007451 3.3e-12 76.6 179 29.1
Manes.09G016732 Manihot esculenta HOM05D007529 ORTHO05D007451 5.6e-12 75.9 251 27.9
Haze_19755 Corylus avellana HOM05D007529 ORTHO05D007451 7.3e-12 75.5 182 30.2
Eucgr.K01581 Eucalyptus grandis HOM05D007529 ORTHO05D007451 7.3e-12 75.5 185 31.4
FAN17G0712 Fragaria x ananassa HOM05D007529 ORTHO05D007451 7.3e-12 75.5 179 29.6
Manes.09G016600 Manihot esculenta HOM05D007529 ORTHO05D007451 9.5e-12 75.1 251 27.9
Peaxi162Scf00130g00112 Petunia axillaris HOM05D007529 ORTHO05D007451 9.5e-12 75.1 242 26.9
HPP92_011341 Vanilla planifolia HOM05D007529 ORTHO05D007451 1.2e-11 74.7 191 30.4
AUR62030393 Chenopodium quinoa HOM05D007529 ORTHO05D007451 3.6e-11 73.2 250 26.4
FAN14G0143 Fragaria x ananassa HOM05D007529 ORTHO05D007451 4.7e-11 72.8 179 29.6
AL6G13510 Arabidopsis lyrata HOM05D021302 ORTHO05D021386 6.1e-11 72.4 133 36.8
COL.COLO4_30902 Corchorus olitorius HOM05D007529 ORTHO05D007451 6.1e-11 72.4 259 26.3
Solyc04g017670.3 Solanum lycopersicum HOM05D007529 ORTHO05D007451 6.1e-11 72.4 265 25.7
Cfa016748 Carpinus fangiana HOM05D002613 ORTHO05D003140 1.8e-10 70.9 182 29.7
AL6G13530 Arabidopsis lyrata HOM05D021302 ORTHO05D021386 2.3e-10 70.5 172 30.8
MELO3C014209.2 Cucumis melo HOM05D007529 ORTHO05D007451 3.0e-10 70.1 262 25.2
HanXRQChr17g0545881 Helianthus annuus HOM05D007529 ORTHO05D007451 3.0e-10 70.1 249 26.1
Sopen04g008750 Solanum pennellii HOM05D007529 ORTHO05D007451 4.0e-10 69.7 266 25.2
Psat6g093280 Pisum sativum HOM05D007529 ORTHO05D007451 8.9e-10 68.6 117 35.9
PSO384G2280 Papaver somniferum HOM05D007529 ORTHO05D007451 1.2e-09 68.2 273 26.4
HPP92_011264 Vanilla planifolia HOM05D007529 ORTHO05D007451 1.2e-09 68.2 158 31.6
HanXRQChr01g0008291 Helianthus annuus HOM05D007529 ORTHO05D007451 2.6e-09 67.0 246 27.2
Actinidia38146 Actinidia chinensis HOM05D000001 ORTHO05D009995 5.7e-09 65.9 243 27.2
Carub.0006s0288 Capsella rubella HOM05D021302 ORTHO05D021386 3.7e-08 63.2 147 32.0
Cc06_g18420 Coffea canephora HOM05D007529 ORTHO05D007451 3.7e-08 63.2 251 26.3
SGA_v2.0_scaffold21G09330 Striga asiatica HOM05D007529 ORTHO05D007451 6.4e-08 62.4 255 25.9
Nitab4.5_0005195g0010 Nicotiana tabacum HOM05D007529 ORTHO05D007451 4.1e-07 59.7 253 24.5
Zm00001eb150670 Zea mays HOM05D007529 ORTHO05D007451 7.0e-07 58.9 46 52.2
Os01g0800900 Oryza sativa ssp. japonica HOM05D007529 ORTHO05D007451 2.0e-06 57.4 161 28.6


User provided reference genes

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