Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p56610 Brassica napus HOM05D006256 ORTHO05D007833 1.7e-71 272.7 148 100.0
BraA09t41052Z Brassica rapa HOM05D006256 ORTHO05D007833 1.7e-71 272.7 148 100.0
BcaC07g40961 Brassica carinata HOM05D006256 ORTHO05D007833 8.2e-71 270.4 148 99.3
C08p39560 Brassica napus HOM05D006256 ORTHO05D007833 7.2e-67 257.3 148 96.6
BolC8t51529H Brassica oleracea HOM05D006256 ORTHO05D007833 7.2e-67 257.3 148 96.6
Sp4g02990 Schrenkiella parvula HOM05D006256 ORTHO05D007833 2.7e-66 255.4 148 91.9
BolC4t26923H Brassica oleracea HOM05D006256 ORTHO05D007833 2.2e-63 245.7 149 91.3
A04p18400 Brassica napus HOM05D006256 ORTHO05D007833 3.7e-63 245.0 149 91.3
BraA04t17452Z Brassica rapa HOM05D006256 ORTHO05D007833 3.7e-63 245.0 149 91.3
C04p53670 Brassica napus HOM05D006256 ORTHO05D007833 8.2e-63 243.8 149 91.3
Thhalv10000362m.g Eutrema salsugineum HOM05D006256 ORTHO05D007833 3.8e-60 235.0 150 86.7
Carub.0004s0326 Capsella rubella HOM05D006256 ORTHO05D007833 4.1e-54 214.9 150 83.3
Aa31LG7G12680 Aethionema arabicum HOM05D006256 ORTHO05D007833 9.1e-54 213.8 153 79.7
AL4G14180 Arabidopsis lyrata HOM05D006256 ORTHO05D007833 1.6e-53 213.0 150 82.7
AT2G24090 Arabidopsis thaliana HOM05D006256 ORTHO05D007833 1.7e-52 209.5 150 82.0
CARHR118260 Cardamine hirsuta HOM05D006256 ORTHO05D007833 2.2e-52 209.1 150 81.3
BcaC02g08498 Brassica carinata HOM05D006256 ORTHO05D007833 2.7e-50 202.2 149 79.2
THA.LOC104803911 Tarenaya hassleriana HOM05D006256 ORTHO05D007833 7.7e-45 184.1 158 69.0
Cpa.g.sc199.16 Carica papaya HOM05D006256 ORTHO05D007833 8.6e-44 180.6 152 68.4
Potri.018G102700 Populus trichocarpa HOM05D006256 ORTHO05D007833 1.3e-39 166.8 152 67.1
CiPaw.15G164300 Carya illinoinensis HOM05D006256 ORTHO05D007833 4.9e-39 164.9 153 64.7
Sabra18G0088200 Salix brachista HOM05D006256 ORTHO05D007833 6.3e-39 164.5 151 66.9
Nn2g12458 Nelumbo nucifera HOM05D006256 ORTHO05D007833 1.8e-38 162.9 152 65.8
Manes.14G113600 Manihot esculenta HOM05D006256 ORTHO05D007833 1.6e-37 159.8 153 65.4
MD04G1052200 Malus domestica HOM05D006256 ORTHO05D007833 2.0e-37 159.5 145 62.8
TAR626G0939 Trochodendron aralioides HOM05D006256 ORTHO05D007833 3.5e-37 158.7 149 63.8
ClCG06G012650 Citrullus lanatus HOM05D006256 ORTHO05D007833 1.0e-36 157.1 151 66.2
arahy.Tifrunner.gnm1.ann1.6DRS7R Arachis hypogaea HOM05D006256 ORTHO05D007833 2.3e-36 156.0 153 62.7
Atru.chr7.353 Acer truncatum HOM05D006256 ORTHO05D007833 6.6e-36 154.5 151 64.2
MELO3C010199.2 Cucumis melo HOM05D006256 ORTHO05D007833 6.6e-36 154.5 151 66.9
Duzib187G1001 Durio zibethinus HOM05D006256 ORTHO05D007833 6.6e-36 154.5 152 61.8
Prupe.1G102100 Prunus persica HOM05D006256 ORTHO05D007833 6.6e-36 154.5 149 62.4
CsaV3_1G029200 Cucumis sativus L. HOM05D006256 ORTHO05D007833 8.6e-36 154.1 151 66.9
TWI32G1056 Tripterygium wilfordii HOM05D006256 ORTHO05D007833 1.1e-35 153.7 151 60.9
FAN07G0991 Fragaria x ananassa HOM05D006256 ORTHO05D007833 1.5e-35 153.3 142 65.5
Sed0025015 Sechium edule HOM05D006256 ORTHO05D007833 1.9e-35 152.9 151 64.2
Haze_19139 Corylus avellana HOM05D006256 ORTHO05D007833 3.3e-35 152.1 154 61.7
MBI15_g35737_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 3.3e-35 152.1 150 62.0
arahy.Tifrunner.gnm1.ann1.RJ4A7B Arachis hypogaea HOM05D006256 ORTHO05D007833 4.3e-35 151.8 152 61.8
FAN17G2907 Fragaria x ananassa HOM05D006256 ORTHO05D007833 9.5e-35 150.6 142 64.8
FAN17G2911 Fragaria x ananassa HOM05D006256 ORTHO05D007833 9.5e-35 150.6 142 64.8
RcHm_v2.0_Chr4g0405501 Rosa chinensis HOM05D006256 ORTHO05D007833 9.5e-35 150.6 147 62.6
FAN22G0392 Fragaria x ananassa HOM05D006256 ORTHO05D007833 1.2e-34 150.2 142 64.8
COL.COLO4_05401 Corchorus olitorius HOM05D006256 ORTHO05D007833 1.6e-34 149.8 149 61.7
Lj4g0007171 Lotus japonicus HOM05D006256 ORTHO05D007833 1.6e-34 149.8 150 61.3
CANSAT11G0095 Cannabis sativa HOM05D006256 ORTHO05D007833 2.1e-34 149.4 148 61.5
Thecc.09G154100 Theobroma cacao HOM05D006256 ORTHO05D007833 2.1e-34 149.4 149 61.7
CiPaw.16G106600 Carya illinoinensis HOM05D006256 ORTHO05D007833 2.8e-34 149.1 145 63.4
Cfa020783 Carpinus fangiana HOM05D006256 ORTHO05D007833 6.1e-34 147.9 156 61.5
VMungo1215G1943 Vigna mungo HOM05D006256 ORTHO05D007833 1.0e-33 147.1 145 62.1
TAR383G0166 Trochodendron aralioides HOM05D006256 ORTHO05D007833 1.4e-33 146.7 149 61.1
Dinv43283 Davidia involucrata HOM05D006256 ORTHO05D007833 2.3e-33 146.0 149 61.7
Phvul.003G153700 Phaseolus vulgaris HOM05D006256 ORTHO05D007833 2.3e-33 146.0 142 60.6
PGR102G0560 Punica granatum HOM05D006256 ORTHO05D007833 2.3e-33 146.0 157 57.3
CDE02G1547 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 3.0e-33 145.6 153 62.7
Ciclev10009792m.g Citrus clementina HOM05D006256 ORTHO05D007833 3.0e-33 145.6 150 62.0
Eucgr.L01548 Eucalyptus grandis HOM05D006256 ORTHO05D007833 3.0e-33 145.6 147 61.2
Hma1.2p1_1084F.1_g255300 Hydrangea macrophylla HOM05D006256 ORTHO05D007833 3.0e-33 145.6 151 59.6
FvH4_4g09690 Fragaria vesca HOM05D006256 ORTHO05D007833 4.0e-33 145.2 138 64.5
CDE05G2121 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 6.8e-33 144.4 155 59.4
Gohir.A08G087800 Gossypium hirsutum HOM05D006256 ORTHO05D007833 1.5e-32 143.3 138 63.0
Eucgr.C02515 Eucalyptus grandis HOM05D006256 ORTHO05D007833 2.0e-32 142.9 147 61.2
Gohir.D08G098900 Gossypium hirsutum HOM05D006256 ORTHO05D007833 2.6e-32 142.5 124 67.7
Glyma.02G206700 Glycine max HOM05D006256 ORTHO05D007833 3.4e-32 142.1 151 62.3
Actinidia38660 Actinidia chinensis HOM05D006256 ORTHO05D007833 4.4e-32 141.7 150 57.3
Aqoxy7G03320 Aquilegia oxysepala HOM05D006256 ORTHO05D007833 1.3e-31 140.2 154 57.8
Gorai.004G106500 Gossypium raimondii HOM05D006256 ORTHO05D007833 1.7e-31 139.8 124 66.9
EL10Ac8g18906 Beta vulgaris HOM05D006256 ORTHO05D007833 2.2e-31 139.4 152 59.9
Cc06_g14490 Coffea canephora HOM05D006256 ORTHO05D007833 2.2e-31 139.4 135 62.2
Glyma.17G071200 Glycine max HOM05D006256 ORTHO05D007833 3.7e-31 138.7 150 59.3
vmacro06052 Vaccinium macrocarpon HOM05D006256 ORTHO05D007833 6.4e-31 137.9 148 57.4
CSS0035436 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 1.4e-30 136.7 134 60.4
Medtr4g130300 Medicago truncatula HOM05D006256 ORTHO05D007833 1.9e-30 136.3 154 57.8
Oeu010284.1 Olea europaea HOM05D006256 ORTHO05D007833 2.4e-30 136.0 150 54.7
Psat7g006560 Pisum sativum HOM05D006256 ORTHO05D007833 2.4e-30 136.0 152 57.9
MSTRG.10713 Avicennia marina HOM05D006256 ORTHO05D007833 9.2e-30 134.0 150 56.0
Lalb_Chr13g0300681 Lupinus albus HOM05D006256 ORTHO05D007833 1.6e-29 133.3 146 59.6
AUR62025373 Chenopodium quinoa HOM05D006256 ORTHO05D007833 2.7e-29 132.5 124 65.3
HanXRQChr12g0357751 Helianthus annuus HOM05D006256 ORTHO05D007833 2.7e-29 132.5 133 59.4
Solyc07g006000.3 Solanum lycopersicum HOM05D006256 ORTHO05D007833 3.5e-29 132.1 145 55.2
PGSC0003DMG400011211 Solanum tuberosum HOM05D006256 ORTHO05D007833 3.5e-29 132.1 145 55.2
SGA_v2.0_scaffold222G42778 Striga asiatica HOM05D006256 ORTHO05D007833 3.5e-29 132.1 150 56.7
Sopen07g002140 Solanum pennellii HOM05D006256 ORTHO05D007833 4.6e-29 131.7 145 55.2
Migut.K00301 Erythranthe guttata HOM05D006256 ORTHO05D007833 1.0e-28 130.6 146 55.5
Lsat_1_v5_gn_5_88481 Lactuca sativa HOM05D006256 ORTHO05D007833 1.0e-28 130.6 139 56.8
HPP92_010352 Vanilla planifolia HOM05D006256 ORTHO05D007833 1.0e-28 130.6 113 66.4
PSO170G3639 Papaver somniferum HOM05D006256 ORTHO05D007833 1.3e-28 130.2 145 57.2
SEGI_40166 Sequoiadendron giganteum HOM05D006256 ORTHO05D007833 1.3e-28 130.2 82 84.1
Hund08959 Selenicereus undatus HOM05D006256 ORTHO05D007833 1.7e-28 129.8 157 57.3
ECA234G3762 Erigeron canadensis HOM05D006256 ORTHO05D007833 2.3e-28 129.4 134 56.7
AUR62028378 Chenopodium quinoa HOM05D006256 ORTHO05D007833 3.0e-28 129.0 145 60.0
Peaxi162Scf00563g00414 Petunia axillaris HOM05D006256 ORTHO05D007833 3.9e-28 128.6 146 54.1
SalBow1G2070 Salvia bowleyana HOM05D006256 ORTHO05D007833 5.0e-28 128.3 113 64.6
PSO063G2398 Papaver somniferum HOM05D006256 ORTHO05D007833 6.6e-28 127.9 113 65.5
Gohir.A04G058552 Gossypium hirsutum HOM05D006256 ORTHO05D007833 1.5e-27 126.7 87 79.3
Migut.J01392 Erythranthe guttata HOM05D006256 ORTHO05D007833 2.5e-27 125.9 112 67.9
HanXRQChr10g0307761 Helianthus annuus HOM05D006256 ORTHO05D007833 2.8e-26 122.5 149 52.3
Nitab4.5_0001036g0150 Nicotiana tabacum HOM05D006256 ORTHO05D007833 2.8e-26 122.5 146 52.7
GSVIVG01012574001 Vitis vinifera HOM05D006256 ORTHO05D007833 2.8e-26 122.5 68 92.6
Nitab4.5_0006744g0050 Nicotiana tabacum HOM05D006256 ORTHO05D007833 4.7e-26 121.7 146 52.1
CSS0023303 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 6.2e-26 121.3 78 80.8
Zm00001eb386680 Zea mays HOM05D006256 ORTHO05D007833 6.2e-26 121.3 123 61.0
GSVIVG01012561001 Vitis vinifera HOM05D006256 ORTHO05D007833 1.1e-25 120.6 67 92.5
Os06g0647100 Oryza sativa ssp. japonica HOM05D006256 ORTHO05D007833 1.4e-25 120.2 76 81.6
MBI15_g42789_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 1.2e-24 117.1 132 53.8
unitig_748.g7194 Utricularia gibba HOM05D006256 ORTHO05D007833 4.9e-23 111.7 128 53.9
Dinv42817 Davidia involucrata HOM05D006256 ORTHO05D007833 5.4e-22 108.2 125 58.4
Actinidia33300 Actinidia chinensis HOM05D006256 ORTHO05D007833 2.7e-21 105.9 144 49.3
QL02p094215 Quercus lobata HOM05D006256 ORTHO05D007833 3.5e-21 105.5 127 55.9
Ah.09g228670 Amaranthus hybridus HOM05D006256 ORTHO05D007833 3.3e-19 99.0 220 38.2
ATR0580G126 Amborella trichopoda HOM05D006256 ORTHO05D007833 3.1e-17 92.4 130 51.5
Rhsim03G0259400 Rhododendron simsii HOM05D006256 ORTHO05D007833 3.1e-17 92.4 77 64.9
Mapoly0027s0042 Marchantia polymorpha HOM05D006256 ORTHO05D007833 4.0e-17 92.0 67 71.6
CBR_g46223 Chara braunii HOM05D006256 ORTHO05D007833 1.2e-16 90.5 73 67.1
SMO164G0197 Selaginella moellendorffii HOM05D006256 ORTHO05D007833 2.0e-16 89.7 127 44.9
TPR.G24835 Trifolium pratense HOM05D006256 ORTHO05D007833 1.3e-15 87.0 119 49.6
Pp3c22_13420 Physcomitrium patens HOM05D006256 ORTHO05D007833 3.7e-15 85.5 110 48.2
CAN.G1190.22 Capsicum annuum HOM05D006256 ORTHO05D007833 3.2e-14 82.4 117 52.1
SGA_v2.0_scaffold12G06024 Striga asiatica HOM05D006256 ORTHO05D007833 9.5e-11 70.9 105 45.7
CSS0026373 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 3.6e-10 68.9 92 48.9
Pp3c21_8680 Physcomitrium patens HOM05D006256 ORTHO05D007833 8.1e-10 67.8 151 35.1
Pp3c21_8670 Physcomitrium patens HOM05D004684 ORTHO05D006904 1.3e-07 60.5 89 44.9
Zm00001eb000270 Zea mays HOM05D006256 ORTHO05D007833 6.4e-07 58.2 48 72.9
PRCOL_00001020 Prasinoderma coloniale HOM05D006256 ORTHO05D007833 2.4e-06 56.2 61 47.5
MCO09G536 Micromonas commoda HOM05D006256 ORTHO05D007833 4.2e-06 55.5 114 36.8


User provided reference genes

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