Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p56430 Brassica napus HOM05D005503 ORTHO05D007451 2.8e-157 558.5 277 100.0
BraA09t41037Z Brassica rapa HOM05D005503 ORTHO05D007451 2.8e-157 558.5 277 100.0
C08p39580 Brassica napus HOM05D005503 ORTHO05D007451 1.2e-142 510.0 277 91.0
BcaC07g40964 Brassica carinata HOM05D005503 ORTHO05D007451 1.7e-141 506.1 277 90.3
A09p56630 Brassica napus HOM05D005503 ORTHO05D007451 9.1e-140 500.4 274 88.7
BraA09t41054Z Brassica rapa HOM05D005503 ORTHO05D007451 9.1e-140 500.4 274 88.7
BcaC07g40948 Brassica carinata HOM05D005503 ORTHO05D007451 2.0e-139 499.2 277 89.9
BolC8t51514H Brassica oleracea HOM05D005503 ORTHO05D007451 2.0e-139 499.2 277 89.9
C08p39400 Brassica napus HOM05D005503 ORTHO05D007451 8.8e-135 483.8 277 87.4
BolC4t26724H Brassica oleracea HOM05D005503 ORTHO05D007451 2.4e-124 449.1 286 79.4
BcaC02g08721 Brassica carinata HOM05D005503 ORTHO05D007451 7.8e-123 444.1 284 78.5
C04p51340 Brassica napus HOM05D005503 ORTHO05D007451 1.7e-122 443.0 284 79.2
Sp6g38750 Schrenkiella parvula HOM05D005503 ORTHO05D007451 1.0e-114 417.2 277 76.5
BolC8t51531H Brassica oleracea HOM05D005503 ORTHO05D007451 2.5e-105 386.0 210 91.4
Thhalv10027188m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 1.5e-102 376.7 280 69.6
Thhalv10015674m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 1.9e-100 369.8 292 68.5
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 3.1e-95 352.4 279 67.4
Thhalv10027472m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 4.0e-95 352.1 280 66.4
Thhalv10015413m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 8.9e-95 350.9 292 65.1
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 6.4e-93 344.7 277 66.8
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 1.1e-92 344.0 277 66.4
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 1.4e-92 343.6 279 66.7
Thhalv10023018m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 1.4e-87 327.0 251 67.7
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 1.3e-85 320.5 274 64.2
AL6G13600 Arabidopsis lyrata HOM05D005503 ORTHO05D007451 6.2e-72 275.0 283 54.1
AT5G04010 Arabidopsis thaliana HOM05D005503 ORTHO05D007451 8.1e-72 274.6 282 52.8
Carub.0006s0294 Capsella rubella HOM05D005503 ORTHO05D007451 6.3e-64 248.4 284 49.3
CARHR209270 Cardamine hirsuta HOM05D005503 ORTHO05D007451 1.0e-61 241.1 266 47.7
Aa31LG6G5380 Aethionema arabicum HOM05D005503 ORTHO05D007451 3.7e-48 196.1 273 44.7
THA.LOC104816403 Tarenaya hassleriana HOM05D007529 ORTHO05D007451 1.6e-27 127.5 251 35.9
Aa31LG6G5360 Aethionema arabicum HOM05D005503 ORTHO05D007451 2.7e-27 126.7 256 37.5
Lalb_Chr02g0156441 Lupinus albus HOM05D007529 ORTHO05D007451 5.9e-22 109.0 258 30.2
Atru.chr1.1251 Acer truncatum HOM05D007529 ORTHO05D007451 2.9e-21 106.7 252 31.7
CANSAT80G2089 Cannabis sativa HOM05D007529 ORTHO05D007451 2.5e-20 103.6 243 32.1
THA.LOC104825175 Tarenaya hassleriana HOM05D007529 ORTHO05D007451 2.5e-20 103.6 236 31.8
CANSAT80G1192 Cannabis sativa HOM05D007529 ORTHO05D007451 2.1e-19 100.5 243 31.7
QL07p004579 Quercus lobata HOM05D007529 ORTHO05D007451 2.8e-19 100.1 250 30.4
AT5G03920 Arabidopsis thaliana HOM05D021302 ORTHO05D021386 1.4e-18 97.8 146 43.2
TWI74G0965 Tripterygium wilfordii HOM05D007529 ORTHO05D007451 1.8e-18 97.4 253 30.8
Nn2g15054 Nelumbo nucifera HOM05D007529 ORTHO05D007451 3.0e-18 96.7 249 31.3
Prupe.7G049500 Prunus persica HOM05D007529 ORTHO05D007451 3.0e-18 96.7 246 29.7
Dinv30288 Davidia involucrata HOM05D007529 ORTHO05D007451 1.5e-17 94.4 245 29.0
TPR.G19652 Trifolium pratense HOM05D007529 ORTHO05D007451 7.5e-17 92.0 265 30.9
Gorai.002G227400 Gossypium raimondii HOM05D007529 ORTHO05D007451 9.8e-17 91.7 239 28.5
Potri.004G076800 Populus trichocarpa HOM05D007529 ORTHO05D007451 9.8e-17 91.7 264 26.9
MD14G1081300 Malus domestica HOM05D007529 ORTHO05D007451 2.2e-16 90.5 244 29.5
Sed0023165 Sechium edule HOM05D007529 ORTHO05D007451 2.8e-16 90.1 261 26.4
Sc19g0008410 Simmondsia chinensis HOM05D007529 ORTHO05D007451 2.8e-16 90.1 252 28.2
Ca_23805_v3 Cicer arietinum L. HOM05D007529 ORTHO05D007451 3.7e-16 89.7 251 31.9
Gohir.D01G183900 Gossypium hirsutum HOM05D007529 ORTHO05D007451 6.3e-16 89.0 243 28.8
PGR142G2784 Punica granatum HOM05D007529 ORTHO05D007451 6.3e-16 89.0 258 29.1
Gohir.A01G193700 Gossypium hirsutum HOM05D007529 ORTHO05D007451 1.1e-15 88.2 239 28.0
Glyma.02G191900 Glycine max HOM05D007529 ORTHO05D007451 1.8e-15 87.4 248 26.6
Ah.13g076730 Amaranthus hybridus HOM05D007529 ORTHO05D007451 3.1e-15 86.7 250 28.4
MBI19_g17527_MAGBIO Magnolia biondii HOM05D007529 ORTHO05D007451 9.2e-15 85.1 245 28.6
Medtr1g041810 Medicago truncatula HOM05D007529 ORTHO05D007451 9.2e-15 85.1 253 30.4
Nitab4.5_0011420g0010 Nicotiana tabacum HOM05D007529 ORTHO05D007451 1.6e-14 84.3 258 27.5
arahy.Tifrunner.gnm1.ann1.5P9T4R Arachis hypogaea HOM05D007529 ORTHO05D007451 2.0e-14 84.0 127 39.4
VMungo0720G2145 Vigna mungo HOM05D007529 ORTHO05D007451 2.0e-14 84.0 243 28.8
FAN22G0851 Fragaria x ananassa HOM05D007529 ORTHO05D007451 2.7e-14 83.6 223 28.3
Nitab4.5_0001618g0110 Nicotiana tabacum HOM05D007529 ORTHO05D007451 3.5e-14 83.2 248 28.2
Potri.006G044801 Populus trichocarpa HOM05D007529 ORTHO05D007451 3.5e-14 83.2 254 28.0
Migut.K00115 Erythranthe guttata HOM05D007529 ORTHO05D007451 7.7e-14 82.0 249 28.1
Lsat_1_v5_gn_5_161020 Lactuca sativa HOM05D007529 ORTHO05D007451 1.0e-13 81.6 246 28.9
Manes.09G016732 Manihot esculenta HOM05D007529 ORTHO05D007451 2.3e-13 80.5 251 27.9
Phvul.007G249000 Phaseolus vulgaris HOM05D007529 ORTHO05D007451 2.3e-13 80.5 183 31.1
ECA248G1753 Erigeron canadensis HOM05D007529 ORTHO05D007451 3.8e-13 79.7 246 27.6
Manes.09G016600 Manihot esculenta HOM05D007529 ORTHO05D007451 3.8e-13 79.7 251 27.9
COL.COLO4_30902 Corchorus olitorius HOM05D007529 ORTHO05D007451 5.0e-13 79.3 254 25.6
Sabra06G0031000 Salix brachista HOM05D005255 ORTHO05D006276 5.0e-13 79.3 245 26.9
AL6G13510 Arabidopsis lyrata HOM05D021302 ORTHO05D021386 6.6e-13 79.0 132 37.9
ClCG04G003960 Citrullus lanatus HOM05D007529 ORTHO05D007451 6.6e-13 79.0 268 26.5
Eucgr.K01581 Eucalyptus grandis HOM05D007529 ORTHO05D007451 6.6e-13 79.0 232 29.7
FAN07G2804 Fragaria x ananassa HOM05D007529 ORTHO05D007451 8.6e-13 78.6 218 27.5
RcHm_v2.0_Chr3g0484581 Rosa chinensis HOM05D007529 ORTHO05D007451 1.5e-12 77.8 241 28.2
EL10Ac3g07171 Beta vulgaris HOM05D007529 ORTHO05D007451 2.5e-12 77.0 257 25.7
Solyc04g017670.3 Solanum lycopersicum HOM05D007529 ORTHO05D007451 4.3e-12 76.3 268 26.5
Haze_19755 Corylus avellana HOM05D007529 ORTHO05D007451 5.6e-12 75.9 182 29.7
FAN22G0252 Fragaria x ananassa HOM05D007529 ORTHO05D007451 5.6e-12 75.9 181 30.4
AUR62030393 Chenopodium quinoa HOM05D007529 ORTHO05D007451 7.3e-12 75.5 251 25.9
FvH4_4g15570 Fragaria vesca HOM05D007529 ORTHO05D007451 9.5e-12 75.1 179 26.3
CsaV3_4G021910 Cucumis sativus L. HOM05D007529 ORTHO05D007451 1.2e-11 74.7 271 23.6
FvH4_4g15460 Fragaria vesca HOM05D007529 ORTHO05D007451 2.1e-11 73.9 178 27.5
HPP92_011341 Vanilla planifolia HOM05D007529 ORTHO05D007451 2.1e-11 73.9 252 27.4
AL6G13530 Arabidopsis lyrata HOM05D021302 ORTHO05D021386 2.8e-11 73.6 154 31.2
FvH4_6g24810 Fragaria vesca HOM05D007529 ORTHO05D007451 2.8e-11 73.6 247 25.9
Sopen04g008750 Solanum pennellii HOM05D007529 ORTHO05D007451 3.6e-11 73.2 269 26.0
FAN12G3128 Fragaria x ananassa HOM05D007529 ORTHO05D007451 4.7e-11 72.8 178 27.5
Cfa016748 Carpinus fangiana HOM05D002613 ORTHO05D003140 6.1e-11 72.4 182 29.7
FAN17G0712 Fragaria x ananassa HOM05D007529 ORTHO05D007451 1.8e-10 70.9 179 26.8
Peaxi162Scf00130g00112 Petunia axillaris HOM05D007529 ORTHO05D007451 2.3e-10 70.5 242 26.0
AL6G13520 Arabidopsis lyrata HOM05D021302 ORTHO05D021386 3.0e-10 70.1 156 34.0
HanXRQChr01g0008291 Helianthus annuus HOM05D007529 ORTHO05D007451 4.0e-10 69.7 247 26.3
PSO384G2280 Papaver somniferum HOM05D007529 ORTHO05D007451 6.8e-10 68.9 266 24.4
FAN14G0143 Fragaria x ananassa HOM05D007529 ORTHO05D007451 8.9e-10 68.6 154 31.2
Cc06_g18420 Coffea canephora HOM05D007529 ORTHO05D007451 1.2e-09 68.2 242 27.3
Actinidia38146 Actinidia chinensis HOM05D000001 ORTHO05D009995 1.5e-09 67.8 246 27.6
MELO3C014209.2 Cucumis melo HOM05D007529 ORTHO05D007451 1.5e-09 67.8 268 25.4
Psat6g093280 Pisum sativum HOM05D007529 ORTHO05D007451 1.5e-09 67.8 117 35.9
HanXRQChr17g0545881 Helianthus annuus HOM05D007529 ORTHO05D007451 2.6e-09 67.0 250 24.8
HPP92_011264 Vanilla planifolia HOM05D007529 ORTHO05D007451 3.4e-09 66.6 158 30.4
Carub.0006s0288 Capsella rubella HOM05D021302 ORTHO05D021386 5.7e-09 65.9 147 32.0
SGA_v2.0_scaffold21G09330 Striga asiatica HOM05D007529 ORTHO05D007451 2.2e-08 63.9 252 27.0
AT5G03930 Arabidopsis thaliana HOM05D021302 ORTHO05D021386 6.4e-08 62.4 154 30.5
Os01g0800900 Oryza sativa ssp. japonica HOM05D007529 ORTHO05D007451 5.4e-07 59.3 161 28.0
Zm00001eb150670 Zea mays HOM05D007529 ORTHO05D007451 7.0e-07 58.9 46 52.2
Nitab4.5_0005195g0010 Nicotiana tabacum HOM05D007529 ORTHO05D007451 2.0e-06 57.4 253 24.9
Ciclev10006854m.g Citrus clementina HOM05D007529 ORTHO05D007451 4.6e-06 56.2 246 24.4
THA.LOC104825174 Tarenaya hassleriana HOM05D007529 ORTHO05D007451 4.6e-06 56.2 132 32.6


User provided reference genes

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