Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p55990 Brassica napus HOM05D006886 ORTHO05D008494 1.3e-82 309.7 156 100.0
A09p56060 Brassica napus HOM05D006886 ORTHO05D008494 1.3e-82 309.7 156 100.0
BraA09t41001Z Brassica rapa HOM05D006886 ORTHO05D008494 1.3e-82 309.7 156 100.0
Sp4g03960 Schrenkiella parvula HOM05D006886 ORTHO05D008494 2.4e-73 278.9 156 92.9
C08p38980 Brassica napus HOM05D006886 ORTHO05D008494 7.1e-73 277.3 156 92.9
Thhalv10000363m.g Eutrema salsugineum HOM05D006886 ORTHO05D008494 1.1e-70 270.0 149 92.6
BcaC07g40900 Brassica carinata HOM05D006886 ORTHO05D008494 1.2e-69 266.5 147 93.9
BolC8t51472H Brassica oleracea HOM05D006886 ORTHO05D008494 1.2e-69 266.5 147 93.9
AL4G16050 Arabidopsis lyrata HOM05D006886 ORTHO05D008494 4.0e-68 261.5 156 87.8
Carub.0004s0454 Capsella rubella HOM05D006886 ORTHO05D008494 1.3e-66 256.5 151 87.4
CARHR116750 Cardamine hirsuta HOM05D006886 ORTHO05D008494 4.9e-66 254.6 151 86.8
AT2G24970 Arabidopsis thaliana HOM05D006886 ORTHO05D008494 8.4e-66 253.8 156 84.6
THA.LOC104819952 Tarenaya hassleriana HOM05D006886 ORTHO05D008494 8.4e-58 227.3 156 75.0
BcaB08g35125 Brassica carinata HOM05D006886 ORTHO05D008494 1.8e-55 219.5 124 90.3
Cpa.g.sc148.45 Carica papaya HOM05D006886 ORTHO05D008494 2.0e-51 206.1 158 65.8
Potri.018G016300 Populus trichocarpa HOM05D006886 ORTHO05D008494 9.9e-51 203.8 153 65.4
COL.COLO4_18973 Corchorus olitorius HOM05D006886 ORTHO05D008494 1.7e-50 203.0 150 66.0
Duzib168G1824 Durio zibethinus HOM05D006886 ORTHO05D008494 6.4e-50 201.1 160 63.1
CiPaw.07G233000 Carya illinoinensis HOM05D006886 ORTHO05D008494 5.5e-49 198.0 153 62.1
Dinv03403 Davidia involucrata HOM05D006886 ORTHO05D008494 1.2e-48 196.8 159 61.0
Gohir.A07G033700 Gossypium hirsutum HOM05D006886 ORTHO05D008494 2.1e-48 196.1 149 64.4
Sabra18G0019800 Salix brachista HOM05D006886 ORTHO05D008494 2.7e-48 195.7 163 61.3
Actinidia22280 Actinidia chinensis HOM05D006886 ORTHO05D008494 3.0e-47 192.2 155 62.6
Glyma.17G221700 Glycine max HOM05D006886 ORTHO05D008494 3.0e-47 192.2 151 63.6
Duzib187G0928 Durio zibethinus HOM05D006886 ORTHO05D008494 1.1e-46 190.3 155 58.7
MD08G1052100 Malus domestica HOM05D006886 ORTHO05D008494 3.3e-46 188.7 147 60.5
Rhsim02G0217500 Rhododendron simsii HOM05D006886 ORTHO05D008494 3.3e-46 188.7 149 61.1
Cc08_g07710 Coffea canephora HOM05D006886 ORTHO05D008494 4.3e-46 188.3 151 62.3
Cfa013010 Carpinus fangiana HOM05D006886 ORTHO05D008494 7.4e-46 187.6 157 59.2
TWI63G0132 Tripterygium wilfordii HOM05D006886 ORTHO05D008494 7.4e-46 187.6 153 60.1
MSTRG.11790 Avicennia marina HOM05D006886 ORTHO05D008494 4.8e-45 184.9 149 62.4
CANSAT25G2371 Cannabis sativa HOM05D006886 ORTHO05D008494 4.8e-45 184.9 153 60.8
Manes.16G132100 Manihot esculenta HOM05D006886 ORTHO05D008494 4.8e-45 184.9 155 61.3
MD15G1043400 Malus domestica HOM05D006886 ORTHO05D008494 6.2e-45 184.5 149 58.4
Glyma.14G104300 Glycine max HOM05D006886 ORTHO05D008494 8.2e-45 184.1 151 61.6
Phvul.001G042700 Phaseolus vulgaris HOM05D006886 ORTHO05D008494 8.2e-45 184.1 151 60.9
Lsat_1_v5_gn_3_22560 Lactuca sativa HOM05D006886 ORTHO05D008494 1.1e-44 183.7 154 58.4
Haze_21375 Corylus avellana HOM05D006886 ORTHO05D008494 1.4e-44 183.3 154 58.4
TPR.G38843 Trifolium pratense HOM05D006886 ORTHO05D008494 1.4e-44 183.3 151 58.9
QL02p018037 Quercus lobata HOM05D006886 ORTHO05D008494 1.8e-44 183.0 146 62.3
EL10Ac2g02461 Beta vulgaris HOM05D006886 ORTHO05D008494 3.1e-44 182.2 151 59.6
SGA_v2.0_scaffold27G11627 Striga asiatica HOM05D006886 ORTHO05D008494 3.1e-44 182.2 149 59.7
Ciclev10010834m.g Citrus clementina HOM05D006886 ORTHO05D008494 9.0e-44 180.6 154 57.1
RcHm_v2.0_Chr6g0299191 Rosa chinensis HOM05D006886 ORTHO05D008494 1.2e-43 180.3 149 59.1
Aa31sc83G60 Aethionema arabicum HOM05D006886 ORTHO05D008494 1.5e-43 179.9 111 82.9
CAN.G285.18 Capsicum annuum HOM05D006886 ORTHO05D008494 2.0e-43 179.5 154 59.1
Lj5g0011023 Lotus japonicus HOM05D006886 ORTHO05D008494 2.0e-43 179.5 151 60.3
PGSC0003DMG400026287 Solanum tuberosum HOM05D006886 ORTHO05D008494 2.0e-43 179.5 159 57.2
Eucgr.F04206 Eucalyptus grandis HOM05D006886 ORTHO05D008494 2.6e-43 179.1 154 56.5
arahy.Tifrunner.gnm1.ann1.QF2P07 Arachis hypogaea HOM05D006886 ORTHO05D008494 3.4e-43 178.7 150 60.0
Hma1.2p1_0355F.1_g133950 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 3.4e-43 178.7 150 56.7
Atru.chr7.2575 Acer truncatum HOM05D006886 ORTHO05D008494 4.5e-43 178.3 153 56.9
Ah.15g098740 Amaranthus hybridus HOM05D006886 ORTHO05D008494 7.6e-43 177.6 149 57.0
CsaV3_4G036380 Cucumis sativus L. HOM05D006886 ORTHO05D008494 7.6e-43 177.6 154 55.8
ECA246G1281 Erigeron canadensis HOM05D006886 ORTHO05D008494 1.0e-42 177.2 146 59.6
Sopen08g002580 Solanum pennellii HOM05D006886 ORTHO05D008494 1.3e-42 176.8 159 56.6
Migut.A00389 Erythranthe guttata HOM05D006886 ORTHO05D008494 2.2e-42 176.0 148 60.8
Thecc.09G013300 Theobroma cacao HOM05D006886 ORTHO05D008494 2.9e-42 175.6 129 65.1
Nitab4.5_0000264g0070 Nicotiana tabacum HOM05D006886 ORTHO05D008494 3.8e-42 175.3 154 57.1
Solyc08g006630.3 Solanum lycopersicum HOM05D006886 ORTHO05D008494 3.8e-42 175.3 159 56.0
Aqoxy7G03293 Aquilegia oxysepala HOM05D006886 ORTHO05D008494 4.9e-42 174.9 153 58.2
HanXRQChr17g0536351 Helianthus annuus HOM05D006886 ORTHO05D008494 8.4e-42 174.1 159 56.0
Oeu010292.1 Olea europaea HOM05D006886 ORTHO05D008494 1.1e-41 173.7 151 55.6
Actinidia14002 Actinidia chinensis HOM05D006886 ORTHO05D008494 1.4e-41 173.3 152 57.9
Lj7A737T48 Lonicera japonica HOM05D006886 ORTHO05D008494 1.4e-41 173.3 149 57.7
Sed0006692 Sechium edule HOM05D006886 ORTHO05D008494 2.5e-41 172.6 151 56.3
PSO063G3428 Papaver somniferum HOM05D006886 ORTHO05D008494 3.2e-41 172.2 159 54.7
Medtr1g013640 Medicago truncatula HOM05D006886 ORTHO05D008494 4.2e-41 171.8 151 55.6
Hund25607 Selenicereus undatus HOM05D006886 ORTHO05D008494 4.2e-41 171.8 162 54.9
Ca_13077_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 7.1e-41 171.0 169 52.7
PGR042G1056 Punica granatum HOM05D006886 ORTHO05D008494 9.3e-41 170.6 144 59.7
Gorai.001G038900 Gossypium raimondii HOM05D006886 ORTHO05D008494 6.0e-40 167.9 123 65.9
PSO782G0555 Papaver somniferum HOM05D006886 ORTHO05D008494 1.3e-39 166.8 159 52.8
ClCG05G016110 Citrullus lanatus HOM05D006886 ORTHO05D008494 2.3e-39 166.0 179 50.3
Prupe.1G396800 Prunus persica HOM05D006886 ORTHO05D008494 3.9e-39 165.2 128 60.2
AUR62032440 Chenopodium quinoa HOM05D006886 ORTHO05D008494 6.7e-39 164.5 171 50.3
vmacro11273 Vaccinium macrocarpon HOM05D006886 ORTHO05D008494 8.7e-39 164.1 181 50.8
Lalb_Chr14g0361721 Lupinus albus HOM05D006886 ORTHO05D008494 1.5e-38 163.3 147 51.7
CDE04G0647 Ceratophyllum demersum HOM05D006886 ORTHO05D008494 2.5e-38 162.5 146 55.5
Sc17g0004260 Simmondsia chinensis HOM05D006886 ORTHO05D008494 7.4e-38 161.0 150 56.0
FAN27G2382 Fragaria x ananassa HOM05D006886 ORTHO05D008494 4.8e-37 158.3 125 59.2
Psat6g024960 Pisum sativum HOM05D006886 ORTHO05D008494 4.8e-37 158.3 151 51.7
TAR625G1053 Trochodendron aralioides HOM05D006886 ORTHO05D008494 1.1e-36 157.1 120 60.0
Nn2g12469 Nelumbo nucifera HOM05D006886 ORTHO05D008494 1.4e-36 156.8 121 61.2
arahy.Tifrunner.gnm1.ann1.5WK6RP Arachis hypogaea HOM05D006886 ORTHO05D008494 3.1e-36 155.6 128 60.2
CSS0014970 Camellia sinensis var. sinensis HOM05D006886 ORTHO05D008494 9.0e-36 154.1 124 60.5
ATR0580G343 Amborella trichopoda HOM05D006886 ORTHO05D008494 7.7e-35 151.0 145 54.5
Dinv16422 Davidia involucrata HOM05D006886 ORTHO05D008494 2.2e-34 149.4 143 51.7
VMungo0647G1481 Vigna mungo HOM05D006886 ORTHO05D008494 2.2e-34 149.4 124 58.1
MBI15_g26075_MAGBIO Magnolia biondii HOM05D006886 ORTHO05D008494 6.5e-34 147.9 190 45.3
AUR62024781 Chenopodium quinoa HOM05D006886 ORTHO05D008494 2.1e-32 142.9 114 57.9
FvH4_2g41341 Fragaria vesca HOM05D006886 ORTHO05D008494 4.6e-32 141.7 111 60.4
FAN15G0524 Fragaria x ananassa HOM05D006886 ORTHO05D008494 1.0e-31 140.6 111 59.5
SHI21090 Sapria himalayana HOM05D006886 ORTHO05D008494 2.8e-29 132.5 111 55.9
Peaxi162Scf00045g01941 Petunia axillaris HOM05D006886 ORTHO05D008494 6.3e-29 131.3 159 48.4
Cfa001083 Carpinus fangiana HOM05D006886 ORTHO05D008494 2.2e-26 122.9 157 43.9
Nitab4.5_0001362g0050 Nicotiana tabacum HOM05D006886 ORTHO05D008494 2.9e-26 122.5 104 56.7
Pp3c17_11010 Physcomitrium patens HOM05D006886 ORTHO05D008494 6.1e-24 114.8 144 43.1
Pp3c14_9080 Physcomitrium patens HOM05D006886 ORTHO05D008494 1.3e-21 107.1 127 40.9
RcHm_v2.0_Chr7g0186961 Rosa chinensis HOM05D006886 ORTHO05D008494 1.7e-21 106.7 86 57.0
Os01g0766400 Oryza sativa ssp. japonica HOM05D006886 ORTHO05D008494 2.8e-21 105.9 145 38.6
Zm00001eb192560 Zea mays HOM05D006886 ORTHO05D008494 2.8e-21 105.9 146 38.4
MELO3C032323.2 Cucumis melo HOM05D006886 ORTHO05D008494 1.1e-20 104.0 76 59.2
Gohir.D07G037233 Gossypium hirsutum HOM05D006886 ORTHO05D008494 3.1e-20 102.4 71 66.2
GSVIVG01036001001 Vitis vinifera HOM05D006886 ORTHO05D008494 4.5e-19 98.6 80 62.5
Hma1.2p1_0355F.1_g133940 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 7.7e-19 97.8 75 56.0
GSVIVG01036003001 Vitis vinifera HOM05D006886 ORTHO05D008494 2.9e-18 95.9 70 62.9
Mapoly0034s0101 Marchantia polymorpha HOM05D006886 ORTHO05D008494 4.2e-17 92.0 142 35.2
AagrBONN_evm.TU.Sc2ySwM_344.4138 Anthoceros agrestis HOM05D006886 ORTHO05D008494 1.6e-16 90.1 117 39.3
MD05G1059000 Malus domestica HOM05D006886 ORTHO05D008494 1.4e-15 87.0 68 60.3
Cfa023326 Carpinus fangiana HOM05D006886 ORTHO05D008494 1.8e-15 86.7 87 51.7
SalBow4G1854 Salvia bowleyana HOM05D006886 ORTHO05D008494 9.7e-14 80.9 82 52.4
MELO3C032324.2 Cucumis melo HOM05D006886 ORTHO05D008494 1.6e-11 73.6 96 43.8
Cre03.g201500 Chlamydomonas reinhardtii HOM05D006886 ORTHO05D008494 4.2e-09 65.5 140 27.9
Ca_06796_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 1.6e-08 63.5 62 54.8


User provided reference genes

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