Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p56030 Brassica napus HOM05D007019 ORTHO05D008398 7.5e-262 906.7 489 100.0
BraA09t41004Z Brassica rapa HOM05D007019 ORTHO05D008398 5.4e-252 874.0 498 96.2
A09p56090 Brassica napus HOM05D007019 ORTHO05D008398 1.0e-250 869.8 497 96.2
C08p39020 Brassica napus HOM05D007019 ORTHO05D008398 9.2e-236 820.1 493 91.9
BolC8t51475H Brassica oleracea HOM05D007019 ORTHO05D008398 1.2e-235 819.7 493 91.9
BcaC07g40903 Brassica carinata HOM05D007019 ORTHO05D008398 2.5e-217 758.8 490 87.1
Sp4g03850 Schrenkiella parvula HOM05D007019 ORTHO05D008398 1.9e-209 732.6 503 82.3
CARHR294580 Cardamine hirsuta HOM05D007019 ORTHO05D008398 3.2e-196 688.7 508 76.8
Thhalv10000137m.g Eutrema salsugineum HOM05D007019 ORTHO05D008398 1.8e-191 672.9 508 74.0
Carub.0004s0445 Capsella rubella HOM05D007019 ORTHO05D008398 2.1e-187 659.4 504 73.8
AT2G24830 Arabidopsis thaliana HOM05D007019 ORTHO05D008398 3.9e-186 655.2 503 74.8
AL4G15870 Arabidopsis lyrata HOM05D007019 ORTHO05D008398 1.2e-182 643.7 500 72.6
Aa31LG7G11570 Aethionema arabicum HOM05D007019 ORTHO05D008398 4.6e-171 605.1 512 69.1
THA.LOC104819948 Tarenaya hassleriana HOM05D007019 ORTHO05D008398 1.4e-154 550.4 518 64.3
CiPaw.07G232900 Carya illinoinensis HOM05D007019 ORTHO05D008398 2.8e-152 542.7 510 61.2
Lj7A737G40 Lonicera japonica HOM05D007019 ORTHO05D008398 2.7e-150 536.2 522 59.0
Cfa013011 Carpinus fangiana HOM05D007019 ORTHO05D008398 2.9e-149 532.7 509 60.5
Manes.16G132200 Manihot esculenta HOM05D007019 ORTHO05D008398 6.1e-147 525.0 507 59.2
arahy.Tifrunner.gnm1.ann1.SS16UG Arachis hypogaea HOM05D007019 ORTHO05D008398 6.8e-146 521.5 505 58.6
Glyma.18G091000 Glycine max HOM05D007019 ORTHO05D008398 9.8e-145 517.7 507 58.4
arahy.Tifrunner.gnm1.ann1.MG10WM Arachis hypogaea HOM05D007019 ORTHO05D008398 1.3e-144 517.3 505 58.8
Lj6g0025581 Lotus japonicus HOM05D007019 ORTHO05D008398 2.8e-144 516.2 506 58.7
TWI32G0429 Tripterygium wilfordii HOM05D007019 ORTHO05D008398 8.3e-144 514.6 506 57.7
Potri.018G016200 Populus trichocarpa HOM05D007019 ORTHO05D008398 1.1e-143 514.2 503 57.5
unitig_46.g18223 Utricularia gibba HOM05D007019 ORTHO05D008398 2.7e-142 509.6 496 56.7
Atru.chr7.2574 Acer truncatum HOM05D007019 ORTHO05D008398 3.5e-142 509.2 504 56.9
Eucgr.C04032 Eucalyptus grandis HOM05D007019 ORTHO05D008398 7.7e-142 508.1 503 58.3
Prupe.1G396900 Prunus persica HOM05D007019 ORTHO05D008398 2.2e-141 506.5 509 59.3
Thecc.09G013400 Theobroma cacao HOM05D007019 ORTHO05D008398 3.8e-141 505.8 510 57.3
Glyma.08G321000 Glycine max HOM05D007019 ORTHO05D008398 5.0e-141 505.4 509 57.6
Gorai.009G064200 Gossypium raimondii HOM05D007019 ORTHO05D008398 6.5e-141 505.0 512 57.2
Hma1.2p1_0737F.1_g210790 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 1.1e-140 504.2 514 57.8
CANSAT25G0065 Cannabis sativa HOM05D007019 ORTHO05D008398 1.9e-140 503.4 506 57.5
Duzib168G1437 Durio zibethinus HOM05D007019 ORTHO05D008398 4.2e-140 502.3 515 55.9
Psat5g174160 Pisum sativum HOM05D007019 ORTHO05D008398 2.7e-139 499.6 511 57.3
Lalb_Chr15g0081591 Lupinus albus HOM05D007019 ORTHO05D008398 3.6e-139 499.2 507 56.8
Ciclev10008089m.g Citrus clementina HOM05D007019 ORTHO05D008398 6.1e-139 498.4 507 55.4
FvH4_2g41350 Fragaria vesca HOM05D007019 ORTHO05D008398 6.1e-139 498.4 502 56.0
QL02p018053 Quercus lobata HOM05D007019 ORTHO05D008398 1.0e-138 497.7 505 56.4
PGR044G2245 Punica granatum HOM05D007019 ORTHO05D008398 1.8e-138 496.9 506 54.3
Rhsim02G0217600 Rhododendron simsii HOM05D007019 ORTHO05D008398 2.3e-138 496.5 503 56.9
COL.COLO4_18972 Corchorus olitorius HOM05D007019 ORTHO05D008398 8.8e-138 494.6 510 56.7
Solyc08g068820.3 Solanum lycopersicum HOM05D007019 ORTHO05D008398 3.4e-137 492.7 507 56.6
MBI14_g16432_MAGBIO Magnolia biondii HOM05D007019 ORTHO05D008398 9.8e-137 491.1 504 58.9
Actinidia14141 Actinidia chinensis HOM05D007019 ORTHO05D008398 1.3e-136 490.7 508 55.7
Medtr3g053700 Medicago truncatula HOM05D007019 ORTHO05D008398 1.3e-136 490.7 506 57.7
PSO210G0129 Papaver somniferum HOM05D007019 ORTHO05D008398 2.2e-136 490.0 504 55.6
CSS0016918 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 3.7e-136 489.2 506 55.5
CSS0023374 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 3.7e-136 489.2 506 55.5
PSO731G0070 Papaver somniferum HOM05D007019 ORTHO05D008398 3.7e-136 489.2 506 54.5
Migut.E01445 Erythranthe guttata HOM05D007019 ORTHO05D008398 8.3e-136 488.0 504 55.4
Oeu021907.1 Olea europaea HOM05D007019 ORTHO05D008398 8.3e-136 488.0 506 55.9
MSTRG.1627 Avicennia marina HOM05D007019 ORTHO05D008398 2.4e-135 486.5 502 55.0
SGA_v2.0_scaffold169G38600 Striga asiatica HOM05D007019 ORTHO05D008398 3.1e-135 486.1 506 58.3
DCAR_003030 Daucus carota HOM05D007019 ORTHO05D008398 4.1e-135 485.7 505 55.4
Nn6g33490 Nelumbo nucifera HOM05D007019 ORTHO05D008398 1.2e-134 484.2 520 55.6
Cc00_g05220 Coffea canephora HOM05D007019 ORTHO05D008398 4.5e-134 482.3 509 56.0
CDE04G0815 Ceratophyllum demersum HOM05D007019 ORTHO05D008398 5.9e-134 481.9 510 57.1
Phvul.006G047900 Phaseolus vulgaris HOM05D007019 ORTHO05D008398 7.7e-134 481.5 508 55.5
RcHm_v2.0_Chr6g0299181 Rosa chinensis HOM05D007019 ORTHO05D008398 7.7e-134 481.5 506 56.3
Gohir.A05G061000 Gossypium hirsutum HOM05D007019 ORTHO05D008398 1.7e-133 480.3 511 55.0
Gohir.D05G063200 Gossypium hirsutum HOM05D007019 ORTHO05D008398 1.7e-133 480.3 512 55.3
FAN27G2994 Fragaria x ananassa HOM05D007019 ORTHO05D008398 8.6e-133 478.0 485 55.7
Lsat_1_v5_gn_6_78060 Lactuca sativa HOM05D007019 ORTHO05D008398 8.6e-133 478.0 507 55.0
ClCG08G013800 Citrullus lanatus HOM05D007019 ORTHO05D008398 1.1e-132 477.6 508 54.1
VMungo0540G1233 Vigna mungo HOM05D007019 ORTHO05D008398 1.1e-132 477.6 508 55.5
ATR0580G102 Amborella trichopoda HOM05D007019 ORTHO05D008398 1.6e-131 473.8 518 53.3
MELO3C011312.2 Cucumis melo HOM05D007019 ORTHO05D008398 1.6e-131 473.8 508 53.7
HanXRQChr03g0084841 Helianthus annuus HOM05D007019 ORTHO05D008398 1.6e-131 473.8 526 51.7
Sed0002524 Sechium edule HOM05D007019 ORTHO05D008398 2.8e-131 473.0 515 53.6
Ca_26389_v3 Cicer arietinum L. HOM05D007019 ORTHO05D008398 2.3e-130 469.9 505 54.9
CsaV3_2G032590 Cucumis sativus L. HOM05D007019 ORTHO05D008398 4.0e-130 469.2 508 53.3
TPR.G32253 Trifolium pratense HOM05D007019 ORTHO05D008398 4.0e-130 469.2 509 54.8
Zm00001eb257650 Zea mays HOM05D007019 ORTHO05D008398 6.8e-130 468.4 508 55.9
Aqoxy7G03288 Aquilegia oxysepala HOM05D007019 ORTHO05D008398 8.9e-130 468.0 508 56.1
PGSC0003DMG400014784 Solanum tuberosum HOM05D007019 ORTHO05D008398 2.6e-129 466.5 508 53.5
Cpa.g.sc148.46 Carica papaya HOM05D007019 ORTHO05D008398 2.9e-128 463.0 506 53.2
EL10Ac2g02454 Beta vulgaris HOM05D007019 ORTHO05D008398 7.0e-127 458.4 561 49.6
Sabra18G0019700 Salix brachista HOM05D007019 ORTHO05D008398 9.2e-127 458.0 529 51.2
Hund25606 Selenicereus undatus HOM05D007019 ORTHO05D008398 2.0e-126 456.8 526 50.8
ECA240G4302 Erigeron canadensis HOM05D007019 ORTHO05D008398 1.1e-124 451.1 529 49.9
Sc23g0006120 Simmondsia chinensis HOM05D007019 ORTHO05D008398 1.1e-124 451.1 523 53.9
FAN15G0718 Fragaria x ananassa HOM05D007019 ORTHO05D008398 3.1e-122 443.0 517 51.5
CAN.G273.24 Capsicum annuum HOM05D007019 ORTHO05D008398 2.0e-121 440.3 508 49.8
AUR62024776 Chenopodium quinoa HOM05D007019 ORTHO05D008398 3.5e-118 429.5 549 50.8
HPP92_010745 Vanilla planifolia HOM05D007019 ORTHO05D008398 1.0e-117 427.9 509 49.1
AUR62032443 Chenopodium quinoa HOM05D007019 ORTHO05D008398 1.3e-117 427.6 528 49.6
Sopen08g022560 Solanum pennellii HOM05D007019 ORTHO05D008398 1.9e-116 423.7 416 57.2
Nitab4.5_0000406g0110 Nicotiana tabacum HOM05D007019 ORTHO05D008398 3.9e-109 399.4 510 48.6
TAR636G0280 Trochodendron aralioides HOM05D007019 ORTHO05D008398 5.6e-108 395.6 359 57.9
SEGI_04420 Sequoiadendron giganteum HOM05D007019 ORTHO05D008398 9.9e-105 384.8 518 45.6
Nitab4.5_0012106g0030 Nicotiana tabacum HOM05D007019 ORTHO05D008398 2.1e-102 377.1 508 46.7
Pp3c21_5730 Physcomitrium patens HOM05D007019 ORTHO05D008398 2.4e-98 363.6 537 41.9
vmacro11274 Vaccinium macrocarpon HOM05D007019 ORTHO05D008398 3.1e-98 363.2 500 47.6
MD08G1051900 Malus domestica HOM05D007019 ORTHO05D008398 1.3e-93 347.8 368 57.9
Mapoly0067s0020 Marchantia polymorpha HOM05D007019 ORTHO05D008398 1.3e-93 347.8 534 42.7
Dinv03401 Davidia involucrata HOM05D007019 ORTHO05D008398 4.8e-91 339.3 373 57.9
SMO116G0382 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 1.4e-90 337.8 503 44.7
Hma1.2p1_0737F.1_g210800 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 1.3e-80 304.7 344 54.7
SHI21092 Sapria himalayana HOM05D007019 ORTHO05D008398 9.6e-76 288.5 590 38.1
GSVIVG01036005001 Vitis vinifera HOM05D007019 ORTHO05D008398 1.3e-59 235.0 189 63.0
Dinv10229 Davidia involucrata HOM05D007019 ORTHO05D008398 2.4e-58 230.7 363 48.2
CBR_g30106 Chara braunii HOM05D007019 ORTHO05D008398 5.7e-52 209.5 570 33.9
AagrBONN_evm.TU.Sc2ySwM_117.1463 Anthoceros agrestis HOM05D007019 ORTHO05D008398 2.2e-51 207.6 369 42.8
Peaxi162Scf01419g00115 Petunia axillaris HOM05D007019 ORTHO05D008398 9.1e-34 149.1 146 54.8
SalBow6G1623 Salvia bowleyana HOM05D007019 ORTHO05D008398 2.7e-33 147.5 192 48.4
SMO116G0105 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 5.2e-29 133.3 312 36.5
Os02g0793000 Oryza sativa ssp. japonica HOM05D007019 ORTHO05D008398 1.2e-22 112.1 106 53.8
AagrBONN_evm.TU.Sc2ySwM_117.1462 Anthoceros agrestis HOM05D007019 ORTHO05D008398 1.1e-18 99.0 148 40.5
SMO269G0003 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 2.4e-18 97.8 306 30.4
CSS0028433 Camellia sinensis var. sinensis HOM05D004574 ORTHO05D005612 5.0e-08 63.5 55 52.7
Lsat_1_v5_gn_5_90461 Lactuca sativa HOM05D004574 ORTHO05D005612 1.9e-07 61.6 81 43.2
Sabra06G0145700 Salix brachista HOM05D004574 ORTHO05D005612 1.9e-07 61.6 73 43.8
Actinidia21909 Actinidia chinensis HOM05D004574 ORTHO05D005612 4.3e-07 60.5 63 47.6
Actinidia04251 Actinidia chinensis HOM05D004574 ORTHO05D005612 5.6e-07 60.1 63 47.6
ECA234G1322 Erigeron canadensis HOM05D004574 ORTHO05D005612 5.6e-07 60.1 75 42.7
HanXRQChr12g0357011 Helianthus annuus HOM05D004574 ORTHO05D005612 5.6e-07 60.1 59 49.2
Sabra18G0096500 Salix brachista HOM05D004574 ORTHO05D005612 9.5e-07 59.3 88 38.6
Nn2g12259 Nelumbo nucifera HOM05D004574 ORTHO05D005612 1.2e-06 58.9 56 48.2
Haze_19313 Corylus avellana HOM05D004574 ORTHO05D005612 1.6e-06 58.5 56 46.4
DCAR_017762 Daucus carota HOM05D004574 ORTHO05D005612 1.6e-06 58.5 71 43.7
Oeu040778.1 Olea europaea HOM05D004574 ORTHO05D005612 1.6e-06 58.5 55 49.1
Cfa020884 Carpinus fangiana HOM05D004574 ORTHO05D005612 2.1e-06 58.2 56 46.4
CiPaw.16G117400 Carya illinoinensis HOM05D004574 ORTHO05D005612 2.1e-06 58.2 63 42.9
DCAR_014931 Daucus carota HOM05D004574 ORTHO05D005612 2.8e-06 57.8 53 52.8
Sopen07g003110 Solanum pennellii HOM05D004574 ORTHO05D005612 2.8e-06 57.8 71 40.8
MSTRG.19628 Avicennia marina HOM05D004574 ORTHO05D005612 4.7e-06 57.0 75 40.0
Cc06_g07390 Coffea canephora HOM05D004574 ORTHO05D005612 6.2e-06 56.6 52 50.0
Potri.018G113600 Populus trichocarpa HOM05D004574 ORTHO05D005612 6.2e-06 56.6 57 47.4
Solyc07g007040.4 Solanum lycopersicum HOM05D004574 ORTHO05D005612 6.2e-06 56.6 57 47.4
Lj9A709T23 Lonicera japonica HOM05D004574 ORTHO05D005612 8.0e-06 56.2 46 54.3


User provided reference genes

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