Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p55240 Brassica napus HOM05D007323 ORTHO05D009238 8.1e-121 437.2 235 100.0
BraA09t40931Z Brassica rapa HOM05D007323 ORTHO05D009238 3.5e-116 421.8 235 97.9
C08p38170 Brassica napus HOM05D007323 ORTHO05D009238 8.1e-113 410.6 235 94.9
BolC8t51392H Brassica oleracea HOM05D007323 ORTHO05D009238 8.1e-113 410.6 235 94.9
BcaC07g40825 Brassica carinata HOM05D007323 ORTHO05D009238 2.4e-109 399.1 228 95.2
BcaB08g35255 Brassica carinata HOM05D007323 ORTHO05D009238 1.2e-105 386.7 235 93.2
Sp4g06990 Schrenkiella parvula HOM05D007323 ORTHO05D009238 5.1e-99 364.8 234 87.2
Thhalv10002091m.g Eutrema salsugineum HOM05D007323 ORTHO05D009238 9.9e-95 350.5 235 83.0
AL4G18960 Arabidopsis lyrata HOM05D007323 ORTHO05D009238 4.5e-87 325.1 232 78.0
Carub.0004s0625 Capsella rubella HOM05D007323 ORTHO05D009238 5.8e-87 324.7 239 77.4
AT2G26340 Arabidopsis thaliana HOM05D007323 ORTHO05D009238 9.3e-85 317.4 240 76.2
A09p54710 Brassica napus HOM05D007323 ORTHO05D009238 2.8e-81 305.8 169 97.0
Aa31LG2G12250 Aethionema arabicum HOM05D007323 ORTHO05D009238 1.3e-78 297.0 222 74.8
THA.LOC104819519 Tarenaya hassleriana HOM05D007323 ORTHO05D009238 1.4e-69 266.9 209 71.3
CARHR118450 Cardamine hirsuta HOM05D007323 ORTHO05D009238 3.2e-69 265.8 177 80.2
COL.COLO4_21139 Corchorus olitorius HOM05D007323 ORTHO05D009238 7.7e-63 244.6 232 57.8
Ciclev10009314m.g Citrus clementina HOM05D007323 ORTHO05D009238 5.5e-61 238.4 214 63.1
Duzib150G1239 Durio zibethinus HOM05D007323 ORTHO05D009238 5.5e-61 238.4 208 62.5
Thecc.09G063400 Theobroma cacao HOM05D007323 ORTHO05D009238 1.2e-60 237.3 208 61.5
Eucgr.B01965 Eucalyptus grandis HOM05D007323 ORTHO05D009238 2.7e-60 236.1 198 63.6
CANSAT25G3877 Cannabis sativa HOM05D007323 ORTHO05D009238 4.6e-60 235.3 233 56.2
Lj1g0021270 Lotus japonicus HOM05D007323 ORTHO05D009238 1.4e-59 233.8 207 61.4
Gorai.001G020100 Gossypium raimondii HOM05D007323 ORTHO05D009238 3.0e-59 232.6 221 57.9
VMungo1309G0522 Vigna mungo HOM05D007323 ORTHO05D009238 3.0e-59 232.6 236 57.2
FAN20G2477 Fragaria x ananassa HOM05D007323 ORTHO05D009238 3.9e-59 232.3 239 57.7
Prupe.1G404100 Prunus persica HOM05D007323 ORTHO05D009238 3.9e-59 232.3 211 62.6
FAN27G1709 Fragaria x ananassa HOM05D007323 ORTHO05D009238 5.1e-59 231.9 239 57.3
RcHm_v2.0_Chr6g0311811 Rosa chinensis HOM05D007323 ORTHO05D009238 1.1e-58 230.7 208 61.5
FvH4_2g30980 Fragaria vesca HOM05D007323 ORTHO05D009238 1.5e-58 230.3 239 57.3
Cfa017873 Carpinus fangiana HOM05D007323 ORTHO05D009238 2.0e-58 229.9 210 60.0
FAN24G0989 Fragaria x ananassa HOM05D007323 ORTHO05D009238 2.0e-58 229.9 239 56.9
Manes.16G085700 Manihot esculenta HOM05D007323 ORTHO05D009238 2.0e-58 229.9 234 56.0
Sabra06G0170600 Salix brachista HOM05D007323 ORTHO05D009238 2.0e-58 229.9 207 61.8
Potri.006G220800 Populus trichocarpa HOM05D007323 ORTHO05D009238 3.3e-58 229.2 208 62.5
Glyma.06G055900 Glycine max HOM05D007323 ORTHO05D009238 4.3e-58 228.8 236 55.5
Lalb_Chr08g0244811 Lupinus albus HOM05D007323 ORTHO05D009238 7.4e-58 228.0 232 55.6
TWI34G0887 Tripterygium wilfordii HOM05D007323 ORTHO05D009238 7.4e-58 228.0 212 58.0
Phvul.009G082000 Phaseolus vulgaris HOM05D007323 ORTHO05D009238 9.7e-58 227.6 228 55.7
Nn8g38659 Nelumbo nucifera HOM05D007323 ORTHO05D009238 1.3e-57 227.3 232 56.5
Dinv41843 Davidia involucrata HOM05D007323 ORTHO05D009238 2.2e-57 226.5 212 60.4
Gohir.D07G019400 Gossypium hirsutum HOM05D007323 ORTHO05D009238 4.8e-57 225.3 221 57.5
MD15G1049800 Malus domestica HOM05D007323 ORTHO05D009238 6.3e-57 224.9 247 55.1
PGR031G0894 Punica granatum HOM05D007323 ORTHO05D009238 6.3e-57 224.9 242 54.1
CiPaw.16G068300 Carya illinoinensis HOM05D007323 ORTHO05D009238 1.8e-56 223.4 220 57.7
QL02p017014 Quercus lobata HOM05D007323 ORTHO05D009238 1.8e-56 223.4 230 55.2
Gohir.A07G019600 Gossypium hirsutum HOM05D007323 ORTHO05D009238 4.1e-56 222.2 193 61.7
Ca_15835_v3 Cicer arietinum L. HOM05D007323 ORTHO05D009238 5.3e-56 221.9 217 57.1
Sed0017686 Sechium edule HOM05D007323 ORTHO05D009238 1.2e-55 220.7 216 58.3
GSVIVG01035470001 Vitis vinifera HOM05D007323 ORTHO05D009238 1.5e-55 220.3 183 62.3
TPR.G3557 Trifolium pratense HOM05D007323 ORTHO05D009238 4.5e-55 218.8 228 56.6
Atru.chr7.1847 Acer truncatum HOM05D007323 ORTHO05D009238 1.0e-54 217.6 173 67.6
arahy.Tifrunner.gnm1.ann1.7DEW7H Arachis hypogaea HOM05D007323 ORTHO05D009238 1.0e-54 217.6 244 53.7
Sc06g0001110 Simmondsia chinensis HOM05D007323 ORTHO05D009238 1.3e-54 217.2 221 54.3
vmacro05236 Vaccinium macrocarpon HOM05D007323 ORTHO05D009238 1.3e-54 217.2 182 63.7
Rhsim10G0107900 Rhododendron simsii HOM05D007323 ORTHO05D009238 3.8e-54 215.7 175 63.4
ECA234G0604 Erigeron canadensis HOM05D007323 ORTHO05D009238 5.0e-54 215.3 199 57.8
Sopen08g017220 Solanum pennellii HOM05D007323 ORTHO05D009238 5.0e-54 215.3 220 54.5
Actinidia03545 Actinidia chinensis HOM05D007323 ORTHO05D009238 1.4e-53 213.8 199 58.3
MELO3C011483.2 Cucumis melo HOM05D007323 ORTHO05D009238 1.9e-53 213.4 241 51.0
Aqoxy7G01049 Aquilegia oxysepala HOM05D007323 ORTHO05D009238 5.5e-53 211.8 216 56.0
Migut.A00078 Erythranthe guttata HOM05D007323 ORTHO05D009238 7.2e-53 211.5 200 59.5
Medtr3g105050 Medicago truncatula HOM05D007323 ORTHO05D009238 7.2e-53 211.5 235 51.9
HanXRQChr10g0309971 Helianthus annuus HOM05D007323 ORTHO05D009238 1.6e-52 210.3 213 54.9
CsaV3_6G031970 Cucumis sativus L. HOM05D007323 ORTHO05D009238 2.1e-52 209.9 215 53.5
MSTRG.25986 Avicennia marina HOM05D007323 ORTHO05D009238 2.7e-52 209.5 199 56.8
Cc08_g01150 Coffea canephora HOM05D007323 ORTHO05D009238 2.7e-52 209.5 235 51.5
EL10Ac2g03780 Beta vulgaris HOM05D007323 ORTHO05D009238 3.6e-52 209.1 221 54.3
Hund03297 Selenicereus undatus HOM05D007323 ORTHO05D009238 3.6e-52 209.1 227 50.2
Haze_18294 Corylus avellana HOM05D007323 ORTHO05D009238 6.1e-52 208.4 286 46.2
Lsat_1_v5_gn_5_79461 Lactuca sativa HOM05D007323 ORTHO05D009238 6.1e-52 208.4 201 55.2
SGA_v2.0_scaffold20G09163 Striga asiatica HOM05D007323 ORTHO05D009238 6.1e-52 208.4 211 54.5
ClCG08G009880 Citrullus lanatus HOM05D007323 ORTHO05D009238 7.9e-52 208.0 234 51.3
Nitab4.5_0002831g0040 Nicotiana tabacum HOM05D007323 ORTHO05D009238 7.9e-52 208.0 220 54.1
unitig_8.g4975 Utricularia gibba HOM05D007323 ORTHO05D009238 1.4e-51 207.2 235 52.8
Nitab4.5_0000446g0180 Nicotiana tabacum HOM05D007323 ORTHO05D009238 8.8e-51 204.5 220 53.6
PSO421G0353 Papaver somniferum HOM05D007323 ORTHO05D009238 2.0e-50 203.4 220 52.3
PSO063G6894 Papaver somniferum HOM05D007323 ORTHO05D009238 3.3e-50 202.6 208 53.4
HPP92_024332 Vanilla planifolia HOM05D007323 ORTHO05D009238 7.4e-50 201.4 219 54.3
ATR0598G133 Amborella trichopoda HOM05D007323 ORTHO05D009238 1.3e-49 200.7 174 61.5
arahy.Tifrunner.gnm1.ann1.287SRD Arachis hypogaea HOM05D007323 ORTHO05D009238 2.8e-49 199.5 251 50.2
DCAR_007767 Daucus carota HOM05D007323 ORTHO05D009238 5.3e-48 195.3 211 55.5
Zm00001eb005760 Zea mays HOM05D007323 ORTHO05D009238 5.3e-48 195.3 204 53.4
CDE05G0862 Ceratophyllum demersum HOM05D007323 ORTHO05D009238 7.0e-48 194.9 199 55.8
Os03g0176700 Oryza sativa ssp. japonica HOM05D007323 ORTHO05D009238 2.0e-47 193.4 192 54.7
SEGI_00918 Sequoiadendron giganteum HOM05D007323 ORTHO05D009238 6.1e-44 181.8 205 50.2
AUR62009079 Chenopodium quinoa HOM05D007323 ORTHO05D009238 1.3e-41 174.1 162 57.4
Pp3c4_13280 Physcomitrium patens HOM05D007323 ORTHO05D009238 1.3e-41 174.1 182 50.5
Psat5g030560 Pisum sativum HOM05D007323 ORTHO05D009238 1.7e-41 173.7 191 53.4
AagrBONN_evm.TU.Sc2ySwM_228.4439 Anthoceros agrestis HOM05D007323 ORTHO05D009238 6.3e-41 171.8 154 56.5
Eucgr.B01870 Eucalyptus grandis HOM05D007323 ORTHO05D009238 1.2e-39 167.5 134 65.7
Mapoly0001s0019 Marchantia polymorpha HOM05D007323 ORTHO05D009238 2.3e-35 153.3 154 51.9
SMO239G0030 Selaginella moellendorffii HOM05D007323 ORTHO05D009238 4.0e-35 152.5 212 43.4
Peaxi162Scf00486g01025 Petunia axillaris HOM05D007323 ORTHO05D009238 9.8e-34 147.9 147 55.1
AUR62020587 Chenopodium quinoa HOM05D007323 ORTHO05D009238 2.8e-33 146.4 136 56.6
TAR636G1368 Trochodendron aralioides HOM05D007323 ORTHO05D009238 2.5e-29 133.3 164 47.6
Cpa.g.sc126.24 Carica papaya HOM05D007323 ORTHO05D009238 4.0e-27 125.9 103 63.1
CBR_g19268 Chara braunii HOM05D007323 ORTHO05D009238 1.2e-26 124.4 167 40.7
MBI13_g42814_MAGBIO Magnolia biondii HOM05D007323 ORTHO05D009238 5.4e-24 115.5 335 32.8
CSS0001075 Camellia sinensis var. sinensis HOM05D007323 ORTHO05D009238 1.2e-23 114.4 105 61.0
CSS0018719 Camellia sinensis var. sinensis HOM05D007323 ORTHO05D009238 1.2e-23 114.4 105 61.0
MD08G1071400 Malus domestica HOM05D007323 ORTHO05D009238 2.7e-15 86.7 62 72.6
Cre16.g684150 Chlamydomonas reinhardtii HOM05D007323 ORTHO05D009238 3.0e-14 83.2 166 33.7
Os03g0176800 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D294036 1.3e-09 67.8 143 31.5
Solyc08g061800.3 Solanum lycopersicum HOM05D007323 ORTHO05D009238 3.7e-09 66.2 89 46.1


User provided reference genes

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